| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317126
Identifier: 74317126
GI number: 74317126
Start: 1166143
End: 1166727
Strand: Direct
Name: 74317126
Synonym: Tbd_1108
Alternate gene names: NA
Gene position: 1166143-1166727 (Clockwise)
Preceding gene: 74317125
Following gene: 74317127
Centisome position: 40.08
GC content: 65.13
Gene sequence:
>585_bases ATGCCGCAGATTACCCGTGACAGCCTGCTGACGCTCGAGGGCTACGCCAAGGTGCGGCCCGCGATGCGGGCCGAAGTGAT GGCGCACAAGAAGAACCGCATGGTCGACCTGGGTGAGCACGTCACCCTGATCTTCGAGGACGAAAAGACCATGCGCTACC AGATCCAGGAGATGCTGCGTGCCGAGCGCACCTTCGAGGACGCGGGCATCCAGGACGAACTCGACGCCTACAATCCGTTG ATCCCGGACGGCAGCAACTGGAAGGCGACGATGATGATCCAGTATTCCGACCCGGACGCCCGCAAGCAGGCGCTGTCCGA CCTCAAGGGCATCGAGGGGCGGGTGTGGGTGCGGGTCGGCGATCAGCCGGCGATCTTCGCGATCGCCGACGAGGATCTCG AGCGCACGAATGCGGAGAAGACTTCCGCGGTGCACTTCCTGCGCTTCGAGCTCGACGCCGCGTCGATCGCCGCGGCCAAG GCCGGCAACCCGGTCCGCATGGGCATCGATCTTCCTGCCTACCAGGTCGACGCGCTCGTGCTGCCCGAGAACACGCGCGC TGCGCTGGCACTGGATTTGGCCTAA
Upstream 100 bases:
>100_bases AAACCGCGGCGCAGAAAGAGCATCCGATCACGCTCCTGCGCATGGCCTACGGCCTCGAATGAAGCGTTTTCTATGAACAC CCATCTGCAAGGGGAAAGAC
Downstream 100 bases:
>100_bases AGTAAATCCAGGGCGGCACCACAACGACGACAGCAACACGCCGCCTTTCCGAGGAGGGCGTGATGCTGGATCAACTGCTG GTTCATCAGGTGCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLRAERTFEDAGIQDELDAYNPL IPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVGDQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAK AGNPVRMGIDLPAYQVDALVLPENTRAALALDLA
Sequences:
>Translated_194_residues MPQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLRAERTFEDAGIQDELDAYNPL IPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVGDQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAK AGNPVRMGIDLPAYQVDALVLPENTRAALALDLA >Mature_193_residues PQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLRAERTFEDAGIQDELDAYNPLI PDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVGDQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAKA GNPVRMGIDLPAYQVDALVLPENTRAALALDLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21702; Mature: 21571
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLR CCCCCCCCEEEECCHHHHCHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHHH AERTFEDAGIQDELDAYNPLIPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVG HHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEC DQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAKAGNPVRMGIDLPAYQVDALV CCCEEEEEECCCHHHCCCCHHHEEEEEEEEECHHHHHHHCCCCCEEEEECCCCEEEEEEE LPENTRAALALDLA ECCCCCEEEEEECC >Mature Secondary Structure PQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLR CCCCCCCEEEECCHHHHCHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHHH AERTFEDAGIQDELDAYNPLIPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVG HHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEC DQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAKAGNPVRMGIDLPAYQVDALV CCCEEEEEECCCHHHCCCCHHHEEEEEEEEECHHHHHHHCCCCCEEEEECCCCEEEEEEE LPENTRAALALDLA ECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA