Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317126

Identifier: 74317126

GI number: 74317126

Start: 1166143

End: 1166727

Strand: Direct

Name: 74317126

Synonym: Tbd_1108

Alternate gene names: NA

Gene position: 1166143-1166727 (Clockwise)

Preceding gene: 74317125

Following gene: 74317127

Centisome position: 40.08

GC content: 65.13

Gene sequence:

>585_bases
ATGCCGCAGATTACCCGTGACAGCCTGCTGACGCTCGAGGGCTACGCCAAGGTGCGGCCCGCGATGCGGGCCGAAGTGAT
GGCGCACAAGAAGAACCGCATGGTCGACCTGGGTGAGCACGTCACCCTGATCTTCGAGGACGAAAAGACCATGCGCTACC
AGATCCAGGAGATGCTGCGTGCCGAGCGCACCTTCGAGGACGCGGGCATCCAGGACGAACTCGACGCCTACAATCCGTTG
ATCCCGGACGGCAGCAACTGGAAGGCGACGATGATGATCCAGTATTCCGACCCGGACGCCCGCAAGCAGGCGCTGTCCGA
CCTCAAGGGCATCGAGGGGCGGGTGTGGGTGCGGGTCGGCGATCAGCCGGCGATCTTCGCGATCGCCGACGAGGATCTCG
AGCGCACGAATGCGGAGAAGACTTCCGCGGTGCACTTCCTGCGCTTCGAGCTCGACGCCGCGTCGATCGCCGCGGCCAAG
GCCGGCAACCCGGTCCGCATGGGCATCGATCTTCCTGCCTACCAGGTCGACGCGCTCGTGCTGCCCGAGAACACGCGCGC
TGCGCTGGCACTGGATTTGGCCTAA

Upstream 100 bases:

>100_bases
AAACCGCGGCGCAGAAAGAGCATCCGATCACGCTCCTGCGCATGGCCTACGGCCTCGAATGAAGCGTTTTCTATGAACAC
CCATCTGCAAGGGGAAAGAC

Downstream 100 bases:

>100_bases
AGTAAATCCAGGGCGGCACCACAACGACGACAGCAACACGCCGCCTTTCCGAGGAGGGCGTGATGCTGGATCAACTGCTG
GTTCATCAGGTGCGGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLRAERTFEDAGIQDELDAYNPL
IPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVGDQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAK
AGNPVRMGIDLPAYQVDALVLPENTRAALALDLA

Sequences:

>Translated_194_residues
MPQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLRAERTFEDAGIQDELDAYNPL
IPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVGDQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAK
AGNPVRMGIDLPAYQVDALVLPENTRAALALDLA
>Mature_193_residues
PQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLRAERTFEDAGIQDELDAYNPLI
PDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVGDQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAKA
GNPVRMGIDLPAYQVDALVLPENTRAALALDLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21702; Mature: 21571

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLR
CCCCCCCCEEEECCHHHHCHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHHH
AERTFEDAGIQDELDAYNPLIPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVG
HHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEC
DQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAKAGNPVRMGIDLPAYQVDALV
CCCEEEEEECCCHHHCCCCHHHEEEEEEEEECHHHHHHHCCCCCEEEEECCCCEEEEEEE
LPENTRAALALDLA
ECCCCCEEEEEECC
>Mature Secondary Structure 
PQITRDSLLTLEGYAKVRPAMRAEVMAHKKNRMVDLGEHVTLIFEDEKTMRYQIQEMLR
CCCCCCCEEEECCHHHHCHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHHH
AERTFEDAGIQDELDAYNPLIPDGSNWKATMMIQYSDPDARKQALSDLKGIEGRVWVRVG
HHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEC
DQPAIFAIADEDLERTNAEKTSAVHFLRFELDAASIAAAKAGNPVRMGIDLPAYQVDALV
CCCEEEEEECCCHHHCCCCHHHEEEEEEEEECHHHHHHHCCCCCEEEEECCCCEEEEEEE
LPENTRAALALDLA
ECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA