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The map label for this gene is rbr [H]

Identifier: 74317124

GI number: 74317124

Start: 1164237

End: 1164656

Strand: Direct

Name: rbr [H]

Synonym: Tbd_1106

Alternate gene names: 74317124

Gene position: 1164237-1164656 (Clockwise)

Preceding gene: 74317120

Following gene: 74317125

Centisome position: 40.01

GC content: 63.1

Gene sequence:

>420_bases
ATGCAACTCAAAGGTTCGAAAACCGAAGAACATCTGAAGGCCGCATTTGCCGGCGAATCGCAGGCCAACCGCCGCTACCT
CTACTTCGCAGCGAAGGCCGACGTCGAAGGCTACAACGACGTCGCTGCCGTCTTCCGTTCGACCGCCGAAGGCGAAACCG
GCCATGCCCACGGCCATCTCGAGTACCTCGAGAAGTGCGGCGACCCCGCGACCGGCATGGCTTTCGGCCCCACCGCCGAC
AACCTGAAGACCGCGATCGCCGGCGAGACGCATGAGTACACCGACATGTACCCGGGCATGGCGAAGGACGCGCGCGGCGA
AGGCTTCGATGAGATCGCCGACTGGTTCGAGACCCTGGCCAAGGCAGAACGCTCGCACGCCAACAAGTTCCAGAAGACCC
TCGACAGCCTGGGTTCCTGA

Upstream 100 bases:

>100_bases
CGCAATTTCATCCCGCGGAGCCGTCGAACGCCGGCGGTGGAGGGCCCCGGGATGGAAGGTCTATGCTGCAAAGCATTTAA
TCAAACAAGGAGATCACGTC

Downstream 100 bases:

>100_bases
CGCACTACGGGGAGACGGGCCGCGGGCCCGTTCCCTGGCCGGCGAGGGCGCCGACCGGACGCAAGCGTCCAAGCGCCTTC
GTGCCGGGCCGAATACCCTG

Product: putative oxidative stress related rubrerythrin protein

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQLKGSKTEEHLKAAFAGESQANRRYLYFAAKADVEGYNDVAAVFRSTAEGETGHAHGHLEYLEKCGDPATGMAFGPTAD
NLKTAIAGETHEYTDMYPGMAKDARGEGFDEIADWFETLAKAERSHANKFQKTLDSLGS

Sequences:

>Translated_139_residues
MQLKGSKTEEHLKAAFAGESQANRRYLYFAAKADVEGYNDVAAVFRSTAEGETGHAHGHLEYLEKCGDPATGMAFGPTAD
NLKTAIAGETHEYTDMYPGMAKDARGEGFDEIADWFETLAKAERSHANKFQKTLDSLGS
>Mature_139_residues
MQLKGSKTEEHLKAAFAGESQANRRYLYFAAKADVEGYNDVAAVFRSTAEGETGHAHGHLEYLEKCGDPATGMAFGPTAD
NLKTAIAGETHEYTDMYPGMAKDARGEGFDEIADWFETLAKAERSHANKFQKTLDSLGS

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 15141; Mature: 15141

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKGSKTEEHLKAAFAGESQANRRYLYFAAKADVEGYNDVAAVFRSTAEGETGHAHGHL
CCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHH
EYLEKCGDPATGMAFGPTADNLKTAIAGETHEYTDMYPGMAKDARGEGFDEIADWFETLA
HHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
KAERSHANKFQKTLDSLGS
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLKGSKTEEHLKAAFAGESQANRRYLYFAAKADVEGYNDVAAVFRSTAEGETGHAHGHL
CCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHH
EYLEKCGDPATGMAFGPTADNLKTAIAGETHEYTDMYPGMAKDARGEGFDEIADWFETLA
HHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
KAERSHANKFQKTLDSLGS
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]