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The map label for this gene is ygiF [H]

Identifier: 74317104

GI number: 74317104

Start: 1147317

End: 1148939

Strand: Direct

Name: ygiF [H]

Synonym: Tbd_1086

Alternate gene names: 74317104

Gene position: 1147317-1148939 (Clockwise)

Preceding gene: 74317097

Following gene: 74317105

Centisome position: 39.43

GC content: 72.27

Gene sequence:

>1623_bases
ATGATAAGCCTCGACGTTTCTCGTGACACGGAGTTTATGGCCGCCGCGCATCCGCTCGAAATCGAGCTCAAGCTGGCCTT
GCCGCCCGGGCAGGTCGAGGCGTTCCGCAAGAAGATGGCGCGGCGCCGGGCGGGCAGGGGCACGCGCAGTGCGCCGCAGC
AGCAGGCGCTCGTGACGCGCTATTTCGATACGCCCGACTTCGACCTCGCCGCCCGCGGCGTCGCGCTCCGCGTCCGTCAG
GCCGGCGCGGTCTGGCTGCAGACCCTGAAGACCGCGAGCGCGTCACACGGCGGGCTGTCGCGGCGCGTCGAGTTCGAAAT
GCCGCTCGACGGCGACGCACTCGACTGGGCCCGGTTTCCGCCCGAGGCGCGCGACTACGTGCCCGAGGCGCTGCGCGCGC
AGGTGCGGCCGCTGTTCGAAACCGGCTTCGAGCGGACGACCTGGCAGGTCGCGTCCGACAACGGCGACCGCATCGAGGTC
GCGCTCGATCTCGGCACTATCCGCACGCTGGAGGCCCCCGCCCTTGAAGGCGAGGTCGGCGAGCGGACGCTGCCGCTGTG
CGAAATCGAACTCGAACTCAAGGCCGGCGAGCCCGACGCGCTGTTTGTGCTTGCCCTCGAATGGGCCGAGGCCTTCGATT
GCGTGCCGCTCGACGCGAGCAAGGCTGCGCGCGGGATCGCGCTCGTGCGCGGCGAGGTCCCCGGTGCGACCGGGGCCCAA
GCGCTCGCGCTCGACGCAGGCATGCGCGTCGAGGAGGGCTTCGCCGCGACCTGCCAGGCCTGCCTCGAACATTTCCAGGC
GAACCTGCACGGCCTGCTCGAGTCGGACGAGGTCGAGTTCGTGCATCAGGCGCGCGTCGCCTTGCGCCGGCTGCGCGCCG
CGCTGCGGCTGTACCGCGGGATCTGCGTCCCGCCCGACGAACTGGCCGCCGTCGTGCGCGAGCTCGCAGCCGCGCTCGGG
CCCGCCCGCGACTGGGATGTATTCTGCAGCGAGACGCTGCCGGCGATCGCGCCTCATTACCCGGACACCGCGTTGTGGCA
GCAGCGGGGCGAGACGCTGGATGCGCGCCGCGCCGCGGTCCGTGCCGAGATGCACGCGACCCTGCGCGCGGCTCGCCCGG
GACGCTGGCTTCTCGCGATGCAGCGCTGGCTGCAGCAGGCGGGCTGGCGCAGCGACCCGTCGGGGCGCCCCTTTGCGCCC
GCACAGCGCGACGCCCAGCAGGCGCCGCTTGAAGCCTTTGCGCGTGGCGCGCTCGACAACGGAGAACGCCGGATCGCCCG
TCGCGCGCGCAAATTCAGTAAGGCCTCGGCGGCGCGACGCCATGCGCTGCGCATCGCGATCAAGCGGCAGCGGTACGCCG
CCGAATTTTTCGAGGCCCTGTTCGACGCGACGGGCAAGCGGCGTCGGCGGCGGGCGCGCTACGTCGCGGCGCTGCGCGAG
GCGCAGGACAGCCTGGGGCGCGCGAACGACCTGCGCACCGCGACGCGGCTGTTGCAGGAAGTCGATGCGGGCGCCACGGG
CGCTTTTGCGCTCGGCTGGCTCGCGGCGCAGCAGGCGGGCGCCGGTGTCGGACAGAGCGCAGGGCCGGTGCGCGCCGTGT
TGAAAGCGAAAACCTACTGGTAG

Upstream 100 bases:

>100_bases
GGCGAGGACCCGGCGCTGGAAGCCGAGAATGCCGAGTTCGCGATTGATGAGTGTGTCGGGGCTGGGCAGGTTCATGAGCC
GGTGGTCAGGGTGTGCTTCA

Downstream 100 bases:

>100_bases
ATCGTGCCCACAGCCTTGCCGTTGCGGCGCGGTGCAATCCACGATCCGCTTTTTTTGGGAGGAAGACCGATGGAACTCAT
CTTGTGGCGCCACGCCGAGG

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MISLDVSRDTEFMAAAHPLEIELKLALPPGQVEAFRKKMARRRAGRGTRSAPQQQALVTRYFDTPDFDLAARGVALRVRQ
AGAVWLQTLKTASASHGGLSRRVEFEMPLDGDALDWARFPPEARDYVPEALRAQVRPLFETGFERTTWQVASDNGDRIEV
ALDLGTIRTLEAPALEGEVGERTLPLCEIELELKAGEPDALFVLALEWAEAFDCVPLDASKAARGIALVRGEVPGATGAQ
ALALDAGMRVEEGFAATCQACLEHFQANLHGLLESDEVEFVHQARVALRRLRAALRLYRGICVPPDELAAVVRELAAALG
PARDWDVFCSETLPAIAPHYPDTALWQQRGETLDARRAAVRAEMHATLRAARPGRWLLAMQRWLQQAGWRSDPSGRPFAP
AQRDAQQAPLEAFARGALDNGERRIARRARKFSKASAARRHALRIAIKRQRYAAEFFEALFDATGKRRRRRARYVAALRE
AQDSLGRANDLRTATRLLQEVDAGATGAFALGWLAAQQAGAGVGQSAGPVRAVLKAKTYW

Sequences:

>Translated_540_residues
MISLDVSRDTEFMAAAHPLEIELKLALPPGQVEAFRKKMARRRAGRGTRSAPQQQALVTRYFDTPDFDLAARGVALRVRQ
AGAVWLQTLKTASASHGGLSRRVEFEMPLDGDALDWARFPPEARDYVPEALRAQVRPLFETGFERTTWQVASDNGDRIEV
ALDLGTIRTLEAPALEGEVGERTLPLCEIELELKAGEPDALFVLALEWAEAFDCVPLDASKAARGIALVRGEVPGATGAQ
ALALDAGMRVEEGFAATCQACLEHFQANLHGLLESDEVEFVHQARVALRRLRAALRLYRGICVPPDELAAVVRELAAALG
PARDWDVFCSETLPAIAPHYPDTALWQQRGETLDARRAAVRAEMHATLRAARPGRWLLAMQRWLQQAGWRSDPSGRPFAP
AQRDAQQAPLEAFARGALDNGERRIARRARKFSKASAARRHALRIAIKRQRYAAEFFEALFDATGKRRRRRARYVAALRE
AQDSLGRANDLRTATRLLQEVDAGATGAFALGWLAAQQAGAGVGQSAGPVRAVLKAKTYW
>Mature_540_residues
MISLDVSRDTEFMAAAHPLEIELKLALPPGQVEAFRKKMARRRAGRGTRSAPQQQALVTRYFDTPDFDLAARGVALRVRQ
AGAVWLQTLKTASASHGGLSRRVEFEMPLDGDALDWARFPPEARDYVPEALRAQVRPLFETGFERTTWQVASDNGDRIEV
ALDLGTIRTLEAPALEGEVGERTLPLCEIELELKAGEPDALFVLALEWAEAFDCVPLDASKAARGIALVRGEVPGATGAQ
ALALDAGMRVEEGFAATCQACLEHFQANLHGLLESDEVEFVHQARVALRRLRAALRLYRGICVPPDELAAVVRELAAALG
PARDWDVFCSETLPAIAPHYPDTALWQQRGETLDARRAAVRAEMHATLRAARPGRWLLAMQRWLQQAGWRSDPSGRPFAP
AQRDAQQAPLEAFARGALDNGERRIARRARKFSKASAARRHALRIAIKRQRYAAEFFEALFDATGKRRRRRARYVAALRE
AQDSLGRANDLRTATRLLQEVDAGATGAFALGWLAAQQAGAGVGQSAGPVRAVLKAKTYW

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=215, Percent_Identity=35.3488372093023, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 59410; Mature: 59410

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLDVSRDTEFMAAAHPLEIELKLALPPGQVEAFRKKMARRRAGRGTRSAPQQQALVTR
CEEECCCCCCHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
YFDTPDFDLAARGVALRVRQAGAVWLQTLKTASASHGGLSRRVEFEMPLDGDALDWARFP
HCCCCCHHHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHCCC
PEARDYVPEALRAQVRPLFETGFERTTWQVASDNGDRIEVALDLGTIRTLEAPALEGEVG
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCC
ERTLPLCEIELELKAGEPDALFVLALEWAEAFDCVPLDASKAARGIALVRGEVPGATGAQ
CCCCCEEEEEEEEECCCCCEEEEEEEEHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCH
ALALDAGMRVEEGFAATCQACLEHFQANLHGLLESDEVEFVHQARVALRRLRAALRLYRG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ICVPPDELAAVVRELAAALGPARDWDVFCSETLPAIAPHYPDTALWQQRGETLDARRAAV
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHH
RAEMHATLRAARPGRWLLAMQRWLQQAGWRSDPSGRPFAPAQRDAQQAPLEAFARGALDN
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCC
GERRIARRARKFSKASAARRHALRIAIKRQRYAAEFFEALFDATGKRRRRRARYVAALRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQDSLGRANDLRTATRLLQEVDAGATGAFALGWLAAQQAGAGVGQSAGPVRAVLKAKTYW
HHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MISLDVSRDTEFMAAAHPLEIELKLALPPGQVEAFRKKMARRRAGRGTRSAPQQQALVTR
CEEECCCCCCHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
YFDTPDFDLAARGVALRVRQAGAVWLQTLKTASASHGGLSRRVEFEMPLDGDALDWARFP
HCCCCCHHHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHCCC
PEARDYVPEALRAQVRPLFETGFERTTWQVASDNGDRIEVALDLGTIRTLEAPALEGEVG
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCC
ERTLPLCEIELELKAGEPDALFVLALEWAEAFDCVPLDASKAARGIALVRGEVPGATGAQ
CCCCCEEEEEEEEECCCCCEEEEEEEEHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCH
ALALDAGMRVEEGFAATCQACLEHFQANLHGLLESDEVEFVHQARVALRRLRAALRLYRG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ICVPPDELAAVVRELAAALGPARDWDVFCSETLPAIAPHYPDTALWQQRGETLDARRAAV
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHH
RAEMHATLRAARPGRWLLAMQRWLQQAGWRSDPSGRPFAPAQRDAQQAPLEAFARGALDN
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCC
GERRIARRARKFSKASAARRHALRIAIKRQRYAAEFFEALFDATGKRRRRRARYVAALRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQDSLGRANDLRTATRLLQEVDAGATGAFALGWLAAQQAGAGVGQSAGPVRAVLKAKTYW
HHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]