Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317088

Identifier: 74317088

GI number: 74317088

Start: 1129400

End: 1129966

Strand: Reverse

Name: 74317088

Synonym: Tbd_1070

Alternate gene names: NA

Gene position: 1129966-1129400 (Counterclockwise)

Preceding gene: 74317089

Following gene: 74317087

Centisome position: 38.83

GC content: 59.96

Gene sequence:

>567_bases
ATGCTGAAACGATTGACACTGGTTTGTCTGGCACTGCTGGTCTCGGCCTGCGCGACAGGAACGCGGATCACGGAACTCCA
TGACCGCTCGCTGGCCTACGGCTGGCTGGACATCACCGACGTGGACGCCAACCGCCTGCATGCGGTCAACATCTACCAGT
TCCGTCCCCACACGGCCGAGCCGTACTACCCGGCGCGGGTGATCAAATTCAAGGAAGGATTTCTCTATTACTCGATGGTG
CTTCCCAACGGGTCGCACAAGACAGAGTCCGCCTCGGGCCAACGATGCCTGGGCTTCCTCTGCAGCAACACGATCTACGA
GTATTCGTTTGGCAAGCAGGGCGATAAGGTCGGCGCAGTGGCCATCAAAAACCCGGGGGTCTATTCGCTCGGTTCTTACA
AGCTGACGAAAGTGAAGACCGGCTTTTTCGAACAGGGCAAGTTCGACGTCGCGCCGGCCCGTGACGCGCCGTCGAAGCGC
GAGCAGCTCGAGGAAATCCTGAAGAACGTGCAGGACGAGCCGGTGGTCGCCGAGCGGGTCCGGCGTGAACTGGCCAAGCT
GAAATGA

Upstream 100 bases:

>100_bases
ATCCCCTCGTCCGCTCAAGATCAACAAATGGCTGCCGCTAAAACGCCGGGGATTCAATAAAGAGCCGACCCGGCTCGCAT
AACACGATCAGGGGGTATTC

Downstream 100 bases:

>100_bases
AGAAGGCGCTTCTGGTGGTTTTATGTCTGGCGCTCCAGGCCTGCGCCCTGCCGCGCCCCCTACCGCCGGCGACCGACCTG
AAGACAGAGGCCTCCGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MLKRLTLVCLALLVSACATGTRITELHDRSLAYGWLDITDVDANRLHAVNIYQFRPHTAEPYYPARVIKFKEGFLYYSMV
LPNGSHKTESASGQRCLGFLCSNTIYEYSFGKQGDKVGAVAIKNPGVYSLGSYKLTKVKTGFFEQGKFDVAPARDAPSKR
EQLEEILKNVQDEPVVAERVRRELAKLK

Sequences:

>Translated_188_residues
MLKRLTLVCLALLVSACATGTRITELHDRSLAYGWLDITDVDANRLHAVNIYQFRPHTAEPYYPARVIKFKEGFLYYSMV
LPNGSHKTESASGQRCLGFLCSNTIYEYSFGKQGDKVGAVAIKNPGVYSLGSYKLTKVKTGFFEQGKFDVAPARDAPSKR
EQLEEILKNVQDEPVVAERVRRELAKLK
>Mature_188_residues
MLKRLTLVCLALLVSACATGTRITELHDRSLAYGWLDITDVDANRLHAVNIYQFRPHTAEPYYPARVIKFKEGFLYYSMV
LPNGSHKTESASGQRCLGFLCSNTIYEYSFGKQGDKVGAVAIKNPGVYSLGSYKLTKVKTGFFEQGKFDVAPARDAPSKR
EQLEEILKNVQDEPVVAERVRRELAKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21125; Mature: 21125

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLTLVCLALLVSACATGTRITELHDRSLAYGWLDITDVDANRLHAVNIYQFRPHTAE
CCHHHHHHHHHHHHHHHCCCCEEEHHCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCC
PYYPARVIKFKEGFLYYSMVLPNGSHKTESASGQRCLGFLCSNTIYEYSFGKQGDKVGAV
CCCCEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEE
AIKNPGVYSLGSYKLTKVKTGFFEQGKFDVAPARDAPSKREQLEEILKNVQDEPVVAERV
EECCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
RRELAKLK
HHHHHHCC
>Mature Secondary Structure
MLKRLTLVCLALLVSACATGTRITELHDRSLAYGWLDITDVDANRLHAVNIYQFRPHTAE
CCHHHHHHHHHHHHHHHCCCCEEEHHCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCC
PYYPARVIKFKEGFLYYSMVLPNGSHKTESASGQRCLGFLCSNTIYEYSFGKQGDKVGAV
CCCCEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEE
AIKNPGVYSLGSYKLTKVKTGFFEQGKFDVAPARDAPSKREQLEEILKNVQDEPVVAERV
EECCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
RRELAKLK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA