| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317086
Identifier: 74317086
GI number: 74317086
Start: 1127929
End: 1128723
Strand: Reverse
Name: 74317086
Synonym: Tbd_1068
Alternate gene names: NA
Gene position: 1128723-1127929 (Counterclockwise)
Preceding gene: 74317087
Following gene: 74317085
Centisome position: 38.79
GC content: 60.88
Gene sequence:
>795_bases ATGAAAACCGTATACGAACCGTCAAACGCCCTCGAAGCCCACATGCTTCACGATCTCCTGCAGCACGAAGGCATACCCTC GCGGGTGGACGGGGCCTATCTTCAGGGCGCCGTGGGCGAACTTCCGGCCAGCGGCCTGGTTCGGCTGGTGGTCGAAGATG ACGACTACGAGCGGGCGAGAGCCGTCATTCGGCGTTGGGAAGCAACGGAGGTATCCGAGCCGACTCCACCGCCGGCCCAA CCGCTGGCAGGAGGTTTCGGCGGTGTCCTGGCCGGGGTATTGATTGGCGTCGTCGGTGCATTCCTGTTCTTCCGTGCACC CATGAACAATGACGGAGTCGACTACAACCATGACGGCGTTCTCGACCAGGTCTGGCGCTATTCGCCGAGCGGTACATTTC TGGGTACCCGGGTCGACCGCAATCTCGACGGAAGAACCGACTACCTGGAAGTCGCGGACAGGCGCGGCTATGTGGTATCG GCCGAAGCGGATGACGACTTCGACGGGAACTTCGAAACCGGATACCGCTTTCATGCGGGCAACTACGAATCAGGCGAGGT GGATACCGATGGTGACACCATCGTCGATTTGAAGATGACATACCAACACGGCGTACTGGCATCCGTGGAATACCTCAACC CCCATACGGCCTTGCCGGTCCGCGTCGAGCACTATCGACTCAGCGTGCTGACCGCTGCCGAGGTCGACGTCGACAAGGAC GGCAGGCTCGACACGCGTTACACCTACTCGCCCGCGGCCGAGATCACGGGCAAACAAGCCATTTCTGCACGGTGA
Upstream 100 bases:
>100_bases TTCGCTGATATCGAACACAACCGGCGCTGGCGCTGGTACCGCGGGCCGCCTGCCAGGCTGGGTCCCTCGAAACGACCCCG GCATCCGCCAACCGGAACCG
Downstream 100 bases:
>100_bases ACGAATAGATCGCGTTGTCCGCGCCCTTCAAACGCGTCGTGGCGCAAAGGCAGTCCCGACACGAGAGAGACAATATCGCG TCCGAGCAGACGCAGGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKTVYEPSNALEAHMLHDLLQHEGIPSRVDGAYLQGAVGELPASGLVRLVVEDDDYERARAVIRRWEATEVSEPTPPPAQ PLAGGFGGVLAGVLIGVVGAFLFFRAPMNNDGVDYNHDGVLDQVWRYSPSGTFLGTRVDRNLDGRTDYLEVADRRGYVVS AEADDDFDGNFETGYRFHAGNYESGEVDTDGDTIVDLKMTYQHGVLASVEYLNPHTALPVRVEHYRLSVLTAAEVDVDKD GRLDTRYTYSPAAEITGKQAISAR
Sequences:
>Translated_264_residues MKTVYEPSNALEAHMLHDLLQHEGIPSRVDGAYLQGAVGELPASGLVRLVVEDDDYERARAVIRRWEATEVSEPTPPPAQ PLAGGFGGVLAGVLIGVVGAFLFFRAPMNNDGVDYNHDGVLDQVWRYSPSGTFLGTRVDRNLDGRTDYLEVADRRGYVVS AEADDDFDGNFETGYRFHAGNYESGEVDTDGDTIVDLKMTYQHGVLASVEYLNPHTALPVRVEHYRLSVLTAAEVDVDKD GRLDTRYTYSPAAEITGKQAISAR >Mature_264_residues MKTVYEPSNALEAHMLHDLLQHEGIPSRVDGAYLQGAVGELPASGLVRLVVEDDDYERARAVIRRWEATEVSEPTPPPAQ PLAGGFGGVLAGVLIGVVGAFLFFRAPMNNDGVDYNHDGVLDQVWRYSPSGTFLGTRVDRNLDGRTDYLEVADRRGYVVS AEADDDFDGNFETGYRFHAGNYESGEVDTDGDTIVDLKMTYQHGVLASVEYLNPHTALPVRVEHYRLSVLTAAEVDVDKD GRLDTRYTYSPAAEITGKQAISAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28979; Mature: 28979
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVYEPSNALEAHMLHDLLQHEGIPSRVDGAYLQGAVGELPASGLVRLVVEDDDYERAR CCCEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHCCCCCCEEEEEEECCCHHHHH AVIRRWEATEVSEPTPPPAQPLAGGFGGVLAGVLIGVVGAFLFFRAPMNNDGVDYNHDGV HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCH LDQVWRYSPSGTFLGTRVDRNLDGRTDYLEVADRRGYVVSAEADDDFDGNFETGYRFHAG HHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NYESGEVDTDGDTIVDLKMTYQHGVLASVEYLNPHTALPVRVEHYRLSVLTAAEVDVDKD CCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCC GRLDTRYTYSPAAEITGKQAISAR CCCCCEEEECCHHHHCCCHHCCCC >Mature Secondary Structure MKTVYEPSNALEAHMLHDLLQHEGIPSRVDGAYLQGAVGELPASGLVRLVVEDDDYERAR CCCEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHCCCCCCEEEEEEECCCHHHHH AVIRRWEATEVSEPTPPPAQPLAGGFGGVLAGVLIGVVGAFLFFRAPMNNDGVDYNHDGV HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCH LDQVWRYSPSGTFLGTRVDRNLDGRTDYLEVADRRGYVVSAEADDDFDGNFETGYRFHAG HHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NYESGEVDTDGDTIVDLKMTYQHGVLASVEYLNPHTALPVRVEHYRLSVLTAAEVDVDKD CCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCC GRLDTRYTYSPAAEITGKQAISAR CCCCCEEEECCHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA