Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317078

Identifier: 74317078

GI number: 74317078

Start: 1122646

End: 1123023

Strand: Reverse

Name: 74317078

Synonym: Tbd_1060

Alternate gene names: NA

Gene position: 1123023-1122646 (Counterclockwise)

Preceding gene: 74317079

Following gene: 74317077

Centisome position: 38.59

GC content: 61.64

Gene sequence:

>378_bases
ATGAAAACGCTTTTTTCCCTGGTCGAATCGCCTTTCCATCCCGATTTCGCCGCGCTCTATCGGAAGCTCGGCATCGCGGC
CCAGCGCTTCGACTCCGCGCGCAACCTTCACCGCGCGCTGCAGAAGCAGCCGCCGGATTTCTTCGTCGGGGAGTTCATCT
ACGGCTGGGGCAACAACTACGCTGGCGCGAACGTCTCGAATCTCGACGTCACGATCCGCACGCTGCAGCGCTTCGCGCCG
CAGGCGAAAGTGATCGTGTTCATGCATCCGCGCGAAGAAGACCATATCGGCAAGCTGCTGGAACTGTTTCCCCTCCACGC
CGTGCTGAGCTATCCGGTGGATGCGCGTCGGCTCGAGGCGGTTCTCGCGCAGCCATAA

Upstream 100 bases:

>100_bases
CGCCTGCTGTCTGGTTTAATGTCGCGTCCTCCATATCCGGCATGCGAAGCCGGTCGCCCCGCTTGACGCGGCGCGGATCG
CGCCGCTCTGAACCCGTCTC

Downstream 100 bases:

>100_bases
GCGATGCCGGTAACGCTCTTCCAGGCGCTCGCCTGCCCGCTGGACGGCACGCCCCTGCAGCGCGACGGCGCCGCATGGCG
CTGCCCTTCGGGCCACAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKTLFSLVESPFHPDFAALYRKLGIAAQRFDSARNLHRALQKQPPDFFVGEFIYGWGNNYAGANVSNLDVTIRTLQRFAP
QAKVIVFMHPREEDHIGKLLELFPLHAVLSYPVDARRLEAVLAQP

Sequences:

>Translated_125_residues
MKTLFSLVESPFHPDFAALYRKLGIAAQRFDSARNLHRALQKQPPDFFVGEFIYGWGNNYAGANVSNLDVTIRTLQRFAP
QAKVIVFMHPREEDHIGKLLELFPLHAVLSYPVDARRLEAVLAQP
>Mature_125_residues
MKTLFSLVESPFHPDFAALYRKLGIAAQRFDSARNLHRALQKQPPDFFVGEFIYGWGNNYAGANVSNLDVTIRTLQRFAP
QAKVIVFMHPREEDHIGKLLELFPLHAVLSYPVDARRLEAVLAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14234; Mature: 14234

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLFSLVESPFHPDFAALYRKLGIAAQRFDSARNLHRALQKQPPDFFVGEFIYGWGNNY
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
AGANVSNLDVTIRTLQRFAPQAKVIVFMHPREEDHIGKLLELFPLHAVLSYPVDARRLEA
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLAQP
HHCCC
>Mature Secondary Structure
MKTLFSLVESPFHPDFAALYRKLGIAAQRFDSARNLHRALQKQPPDFFVGEFIYGWGNNY
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
AGANVSNLDVTIRTLQRFAPQAKVIVFMHPREEDHIGKLLELFPLHAVLSYPVDARRLEA
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLAQP
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA