Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317071

Identifier: 74317071

GI number: 74317071

Start: 1117726

End: 1118268

Strand: Direct

Name: 74317071

Synonym: Tbd_1053

Alternate gene names: NA

Gene position: 1117726-1118268 (Clockwise)

Preceding gene: 74317070

Following gene: 74317074

Centisome position: 38.41

GC content: 60.22

Gene sequence:

>543_bases
ATGGAGAAACGATTCGTGAAAGTCCCGCCCAAGATTGCCGCGCTGGCCTTGTTCCTCGCGCTCCCCGTTCCGTTGCATGC
ATTTGCCGAAGAATTCGCGCCCTACGGCACCGCCAAGGTCGACATGCACGCGATGCCCGTGACCGACGTCGTGTTCGACG
TCAACTACGAGGACCCGCAGCAGTTGAACATCCTCTACAACTTCATCCGCAACACGCAGGCAGTCACCAAGGGCAAGGTC
GCGGTGGTGACCCATGGCCCCGAGTTGCGCGCCTTCGCCAAGGAGAATTACGCGAAATATCAGGGCATCGTCGACAAGAT
GGCGGAGCTCGCGCAGGACGGCGTCGAATTCAAGATGTGCAGCAACGCGATGAAAGCGGCCGGTTTCCGCGCCGAGGACA
TGCACGGCTTCATCACGGTCGTTCCCGCGGGCTTCCCGGAGATCGCCTACTACCAGGCCAAGGGCTACCAGTACATCAAC
CCGATTCCGCTGCCGGTCAAGGACGTGCGCTATCTCGACCAGTCGCAGCTCAAGAAACAGTAG

Upstream 100 bases:

>100_bases
CCTGCGCCCGTCGCCCCTGCAGGCGTTGACCCGCTTGCGCGCGGCCCCACGCAAAGCGGCCCTGTCCCCCAACATGCGGC
CGTAACGGCCCGTTCGACTT

Downstream 100 bases:

>100_bases
TTCCGTCCCGGCGCGTCCACGCCGCTGCGCGCGCTGTTTTCACCAAAGCGCCGGCCCGGATAGCTCGGACGGCAAGAACG
GGCAACAGGCCGCGCCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MEKRFVKVPPKIAALALFLALPVPLHAFAEEFAPYGTAKVDMHAMPVTDVVFDVNYEDPQQLNILYNFIRNTQAVTKGKV
AVVTHGPELRAFAKENYAKYQGIVDKMAELAQDGVEFKMCSNAMKAAGFRAEDMHGFITVVPAGFPEIAYYQAKGYQYIN
PIPLPVKDVRYLDQSQLKKQ

Sequences:

>Translated_180_residues
MEKRFVKVPPKIAALALFLALPVPLHAFAEEFAPYGTAKVDMHAMPVTDVVFDVNYEDPQQLNILYNFIRNTQAVTKGKV
AVVTHGPELRAFAKENYAKYQGIVDKMAELAQDGVEFKMCSNAMKAAGFRAEDMHGFITVVPAGFPEIAYYQAKGYQYIN
PIPLPVKDVRYLDQSQLKKQ
>Mature_180_residues
MEKRFVKVPPKIAALALFLALPVPLHAFAEEFAPYGTAKVDMHAMPVTDVVFDVNYEDPQQLNILYNFIRNTQAVTKGKV
AVVTHGPELRAFAKENYAKYQGIVDKMAELAQDGVEFKMCSNAMKAAGFRAEDMHGFITVVPAGFPEIAYYQAKGYQYIN
PIPLPVKDVRYLDQSQLKKQ

Specific function: Unknown

COG id: COG1416

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20189; Mature: 20189

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRFVKVPPKIAALALFLALPVPLHAFAEEFAPYGTAKVDMHAMPVTDVVFDVNYEDPQ
CCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCHHHEEEECCCCCHH
QLNILYNFIRNTQAVTKGKVAVVTHGPELRAFAKENYAKYQGIVDKMAELAQDGVEFKMC
HHHHHHHHHHCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SNAMKAAGFRAEDMHGFITVVPAGFPEIAYYQAKGYQYINPIPLPVKDVRYLDQSQLKKQ
HHHHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHHHCCHHHHCCC
>Mature Secondary Structure
MEKRFVKVPPKIAALALFLALPVPLHAFAEEFAPYGTAKVDMHAMPVTDVVFDVNYEDPQ
CCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCHHHEEEECCCCCHH
QLNILYNFIRNTQAVTKGKVAVVTHGPELRAFAKENYAKYQGIVDKMAELAQDGVEFKMC
HHHHHHHHHHCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SNAMKAAGFRAEDMHGFITVVPAGFPEIAYYQAKGYQYINPIPLPVKDVRYLDQSQLKKQ
HHHHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA