Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317067

Identifier: 74317067

GI number: 74317067

Start: 1114012

End: 1114548

Strand: Reverse

Name: 74317067

Synonym: Tbd_1049

Alternate gene names: NA

Gene position: 1114548-1114012 (Counterclockwise)

Preceding gene: 74317068

Following gene: 74317060

Centisome position: 38.3

GC content: 63.31

Gene sequence:

>537_bases
ATGCCGCGGCGCCGACAGAGCAAGGAGCCTGCCATGCAACTCGCCCAAAAAATCACGCCGTGCCTGTGGTTTTCCGACCA
GGCCGAGGAGGCTGCGGCGTTCTACACCGGAATTTTCAAGAATTCGCGCATATTGCGCACCACCCGCTACGGCAAGGAAG
GATTCGAGGTGCACCGCCGGCCCGAGGGGTCGGTGATGCTCGTCGAATTCGAAATCGAGGGCCAGGTCTTCACCGCGCTC
AATGGCGGACCCGTCTTCCAGTTCAACGAGGCCGTCTCGTTTCAGGTGCTGTGCGAGAACCAGCAGGAGGTCGATTTCTA
CTGGGCGCACCTCGCCGCGGGCGGCGACGAGCAGGCACAGCAGTGCGGCTGGCTCAAGGACAGATTCGGGTTGTCCTGGC
AGGTGATCCCGCGCGCGCTGCCCGAATGGGTCGGCGACCCCGGCTCCGACCGCTGCCAACGGGCGATGCGGGCCATGCTG
CAAATGAAGAAAATCGACATGGACACCGTCTATCACGCCTACCACGGCAGCGCCTGA

Upstream 100 bases:

>100_bases
TGGCGCCGTGACGCACACCCGCGGCGCCGTCGACCGATTCCCACCGCCGCGCCCCTCATTTGCGCGGCGGACGGCTGCGC
GGCACCGGCACGCGCTGGCG

Downstream 100 bases:

>100_bases
GCGCGGTCGGCGTCACGGTTCCACGCCCGTCCCGTCTTCTCCCGCCAGCGGCTCGCCAATCGGCGCGGCGAGTTCCGCCG
GATATTTGCGGCCGTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; PhnB Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPRRRQSKEPAMQLAQKITPCLWFSDQAEEAAAFYTGIFKNSRILRTTRYGKEGFEVHRRPEGSVMLVEFEIEGQVFTAL
NGGPVFQFNEAVSFQVLCENQQEVDFYWAHLAAGGDEQAQQCGWLKDRFGLSWQVIPRALPEWVGDPGSDRCQRAMRAML
QMKKIDMDTVYHAYHGSA

Sequences:

>Translated_178_residues
MPRRRQSKEPAMQLAQKITPCLWFSDQAEEAAAFYTGIFKNSRILRTTRYGKEGFEVHRRPEGSVMLVEFEIEGQVFTAL
NGGPVFQFNEAVSFQVLCENQQEVDFYWAHLAAGGDEQAQQCGWLKDRFGLSWQVIPRALPEWVGDPGSDRCQRAMRAML
QMKKIDMDTVYHAYHGSA
>Mature_177_residues
PRRRQSKEPAMQLAQKITPCLWFSDQAEEAAAFYTGIFKNSRILRTTRYGKEGFEVHRRPEGSVMLVEFEIEGQVFTALN
GGPVFQFNEAVSFQVLCENQQEVDFYWAHLAAGGDEQAQQCGWLKDRFGLSWQVIPRALPEWVGDPGSDRCQRAMRAMLQ
MKKIDMDTVYHAYHGSA

Specific function: Unknown

COG id: COG3865

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20399; Mature: 20268

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRRQSKEPAMQLAQKITPCLWFSDQAEEAAAFYTGIFKNSRILRTTRYGKEGFEVHRR
CCCCCCCCCHHHHHHHHCCHHEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
PEGSVMLVEFEIEGQVFTALNGGPVFQFNEAVSFQVLCENQQEVDFYWAHLAAGGDEQAQ
CCCCEEEEEEEECCEEEEEECCCCEEEECCCEEEEEEECCCCCHHEEEEEHHCCCCHHHH
QCGWLKDRFGLSWQVIPRALPEWVGDPGSDRCQRAMRAMLQMKKIDMDTVYHAYHGSA
HCCCHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
PRRRQSKEPAMQLAQKITPCLWFSDQAEEAAAFYTGIFKNSRILRTTRYGKEGFEVHRR
CCCCCCCCHHHHHHHHCCHHEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
PEGSVMLVEFEIEGQVFTALNGGPVFQFNEAVSFQVLCENQQEVDFYWAHLAAGGDEQAQ
CCCCEEEEEEEECCEEEEEECCCCEEEECCCEEEEEEECCCCCHHEEEEEHHCCCCHHHH
QCGWLKDRFGLSWQVIPRALPEWVGDPGSDRCQRAMRAMLQMKKIDMDTVYHAYHGSA
HCCCHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA