| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316955
Identifier: 74316955
GI number: 74316955
Start: 997285
End: 1000020
Strand: Direct
Name: 74316955
Synonym: Tbd_0937
Alternate gene names: NA
Gene position: 997285-1000020 (Clockwise)
Preceding gene: 74316954
Following gene: 74316956
Centisome position: 34.27
GC content: 62.5
Gene sequence:
>2736_bases ATGAACGCCCGCGTCCTGCACGCCGTCACCGGTCGTCTGTCTCTTCGTCCGCCCCAGGCGGAGTCGCTCACCAAACTGGT TCGCGCGCTTGATGCCGCGCCCGAACTATTGGGCCACGAGCAGGATGTCTCGGCCATTTTGTCGACGCTGAAGGCTGAGT TCAGCACGCTGGAGGACTTCGAGCGCGAGTTCCCGTCGCTGTGCTTCGCGCTGGCCACGGGCGTGGGCAAGACCCGCCTG ATGGGAGCCTTCATCGCCTACCTGCATCTGGCGCACGGCATCAAGAACTTCTTCGTGCTCGCTCCCAACCTGACGATCTA CAACAAACTCATCACGGACTTCACGCGCAACACGCCAAAGTACGTGTTCAAGGGGATCGCCGAATTCGCGCAGCAACCGC CGCTGATCATCACCGGCGACAACTACGACCAGACCGGTGCGGCGGTAGACGAGCAGTCAATGGGCTTCGCTCACGACGTG CGTATCAACATCTTCAACATCTCCAAGATCAACTCCGAGGTGCGCGGCGGCAAGGAGCCGCGCATCAAGCGGATGAAGGA AGTGCTGGGCGACAGCTACTTCAACCACCTGGCTAGTCTTTCTGACCTGGTGCTGCTGATGGACGAGTCGCACCGCTACC GGGCCAGCGCCGGCGTGCGCGCCATCAACGAACTCAAGCCGCTATTCGGTCTGGAAGTGACGGCGACGCCGTTCGTCGAG TCCAGCCGTGGGCCAGTCCCGTTCAAGAACGTGGTGATGGACTACCCGCTGGCGCGCGCGATGGAGGATGGCTTCGTCAA GGAGCCTGCTGTGGTCACCCAGCGCAACTTCGACGCCAAAGCGCACACGCCCGAGGAGATCGAGAAGACCAAGCTTGAAG ACGGTGTGCGCCTGCACGAGACGACCAAGGTCGAGCTGCTCACCTATGCCCGCGAGAACGGCGTCAAGCCGGTCAAGCCC TTCATGCTCGTCATCGCTCGCGATACCACGCACGCGGGGCAACTCTTGGCACTTCTGGAGTCGGAAGCCTTCTACGAGGG GCGTTACCAGGGCAAGGTGATCCAGGTCGATTCCAGCCGTACCGGCGCGGAGGAAGAAGAGATGATCACGCGCCTGCTAG CCGTGGAGAGCGTGGACGAGCCGACCGAGATCGTGATTCACGTCAACATGCTCAAGGAGGGCTGGGACGTAACCAACCTC TATACCATCGTGCCGCTGCGCGCCGCCAATGCCCGCACGTTGATCGAACAGTCCATCGGGCGTGGCCTGCGATTGCCCTA CGGCAAACGCACGGGCGTCGCGTCGGTGGATCGCTTGAACATCGTCGCGCACGACAAGTTCCAGGAGATCATCGACGAGG CCAACCGCGGCGACTCGCCGATTCGCCTGAAGCAGGTCATCCTCGATGCGCCGAGCGCCGACGACAAGAAGGTCAGCGTG CAGGTCGAGTCCGGGGCGGCGGCGCGTCTCGGTTTGACGGACGCACCGGTCGTGATCACAGGGGCTTCAGCCACTGACAG TGGAGCGGAAGTCCCCGCGCCCAAGCCGGTGTTCACCACGGAGGCGGAGAAGCAGGCCGCGCGTGTGGTCATGGACGTCA TCGGCAAGTACGAGGTCAAGCGCGATCTAGTGCCCACCAGCAGCGCGCTGCTGAAACCAGAAGTGCAGAAGGAAATCCTC GCGGAGGTGGCGGAGCGGTTGAAGCCGCTGCAAGGCGAATTGCTCGCGGGCGTGGATGAATCAGTCCCTGCACTTGACTT GTCAGCCGTGGTGGCGAAGACCACCGAGATCGTGGTGCAGCAGACCATCGACATCCCGCGCATCGCAGTGGTGCCGACTG GCGAGGTCACGACGGGCTTCCACGCCTTCAAGCTGGATGTGAGCCAGCTCCATCTCCAGCCGGGTGAGCGCGAGATCGTC ATCCATAACCTGCGCACCAACGAGCAGGATACCCTGGCCGCCGAAGTTGGGCTCAAGGAGCAGCGCCCGGAGGACTACAT CGTCCACGCGCTGGTGGACTTCGACGACATCGACTACTTCACCCACGCCGATCTGCTCTACGACCTCGCGGGCCAGATGG TGCAACACCTGCGCGGCTACCTGTCCGAGGACGAAGCCATCAGCGTCCTCGATCGTGACCGCCGCCTGATCGCACGGGAA ATCCACGCGCAGATGATGGCCCACTTCTGGGAAGAGGCGACCGACTACGAGGTGCAGGTCAGTCGCGGCTTCACCGAACT CAAGCCGTGCAACTACACCGCCACGGCAGGTCAGACGGCCCACCACTTCCGGGAGACCGTGACCGAGACCAGCCGCATCA AGCAGATGCTGTTCGGCGGATTCGCGCGCTGCTTGTATCCGCTGCAGAAGTTCGATTCGGACACGGAGCGGCGCTTCGCC ATCATTCTGGAGCGCGATGCCCTGAAGTGGTTCAAGCCCGCGAAGGGGCAGTTCCAGATCTATTACAAGCTTGGCACCGA GCAGCCGGAGTACATCCCCGACTTCGTGGCCGAGACGGACGCGACCGTCTTCATGGTTGAGACCAAGGCACGTGCCGAGG TCAACTCCCCGGAGGTTCAGGCCAAGACCGCTGCTGCAACGCGCTGGTGCAGCCACGCTTCCGATTACGCCGCGAAGGTA GGCGCCAAACCGTGGAAGTACTTGCTGGTGCCCCACGACGAAATCAATGAGTCGAAGCGGCTCACGGATTACCTGCGCTT TGAGGGCATAACATGA
Upstream 100 bases:
>100_bases CCGAGCCTGCGCCCCCTGGCAATAGCTTCAAGAACACTAAAAGCAGAAAAGCGGCCCTCGCTAACGCGGGACAGGGCGGC CTGTTTGGGGAGAACGAATA
Downstream 100 bases:
>100_bases TTTGGCTGCCGTTGCCCGAACAATTGGGTTCCAATGCGCGAGTCGGATAGGCAAGTGCAGGCGAACGCTAACTCTGCTGA GATGGGGAAACATCCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type III Restriction Res Subunit; Type III Restriction- Helicase Subunit; DNA Restriction- System Restriction; Type III Restriction; PstII Restriction- Res Subunit; Type III Restriction Res Subunit Family; Type III Restriction-; Type III Restriction- System R Subunit
Number of amino acids: Translated: 911; Mature: 911
Protein sequence:
>911_residues MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDFEREFPSLCFALATGVGKTRL MGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDV RINIFNISKINSEVRGGKEPRIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHETTKVELLTYARENGVKPVKP FMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSRTGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNL YTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVKRDLVPTSSALLKPEVQKEIL AEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQQTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIV IHNLRTNEQDTLAAEVGLKEQRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGGFARCLYPLQKFDSDTERRFA IILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETDATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKV GAKPWKYLLVPHDEINESKRLTDYLRFEGIT
Sequences:
>Translated_911_residues MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDFEREFPSLCFALATGVGKTRL MGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDV RINIFNISKINSEVRGGKEPRIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHETTKVELLTYARENGVKPVKP FMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSRTGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNL YTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVKRDLVPTSSALLKPEVQKEIL AEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQQTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIV IHNLRTNEQDTLAAEVGLKEQRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGGFARCLYPLQKFDSDTERRFA IILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETDATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKV GAKPWKYLLVPHDEINESKRLTDYLRFEGIT >Mature_911_residues MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDFEREFPSLCFALATGVGKTRL MGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDV RINIFNISKINSEVRGGKEPRIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHETTKVELLTYARENGVKPVKP FMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSRTGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNL YTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVKRDLVPTSSALLKPEVQKEIL AEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQQTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIV IHNLRTNEQDTLAAEVGLKEQRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGGFARCLYPLQKFDSDTERRFA IILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETDATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKV GAKPWKYLLVPHDEINESKRLTDYLRFEGIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101554; Mature: 101554
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDF CCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EREFPSLCFALATGVGKTRLMGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCHH YVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDVRINIFNISKINSEVRGGKEP HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEEEEEEEHHHCHHHCCCCCH RIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHE CCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEC TTKVELLTYARENGVKPVKPFMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSR CCEEEEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC TGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNLYTIVPLRAANARTLIEQSIG CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCEEEEEEEEECCCHHHHHHHHHC RGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV CCCCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCEEEE QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVK EEECCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RDLVPTSSALLKPEVQKEILAEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQ HCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH QTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIVIHNLRTNEQDTLAAEVGLKE HHCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCC QRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGG HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FARCLYPLQKFDSDTERRFAIILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETD HHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCC ATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKVGAKPWKYLLVPHDEINESKR CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCHHH LTDYLRFEGIT HHHHHHHCCCC >Mature Secondary Structure MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDF CCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EREFPSLCFALATGVGKTRLMGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCHH YVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDVRINIFNISKINSEVRGGKEP HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEEEEEEEHHHCHHHCCCCCH RIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHE CCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEC TTKVELLTYARENGVKPVKPFMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSR CCEEEEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC TGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNLYTIVPLRAANARTLIEQSIG CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCEEEEEEEEECCCHHHHHHHHHC RGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV CCCCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCEEEE QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVK EEECCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RDLVPTSSALLKPEVQKEILAEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQ HCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH QTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIVIHNLRTNEQDTLAAEVGLKE HHCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCC QRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGG HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FARCLYPLQKFDSDTERRFAIILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETD HHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCC ATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKVGAKPWKYLLVPHDEINESKR CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCHHH LTDYLRFEGIT HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA