Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316955

Identifier: 74316955

GI number: 74316955

Start: 997285

End: 1000020

Strand: Direct

Name: 74316955

Synonym: Tbd_0937

Alternate gene names: NA

Gene position: 997285-1000020 (Clockwise)

Preceding gene: 74316954

Following gene: 74316956

Centisome position: 34.27

GC content: 62.5

Gene sequence:

>2736_bases
ATGAACGCCCGCGTCCTGCACGCCGTCACCGGTCGTCTGTCTCTTCGTCCGCCCCAGGCGGAGTCGCTCACCAAACTGGT
TCGCGCGCTTGATGCCGCGCCCGAACTATTGGGCCACGAGCAGGATGTCTCGGCCATTTTGTCGACGCTGAAGGCTGAGT
TCAGCACGCTGGAGGACTTCGAGCGCGAGTTCCCGTCGCTGTGCTTCGCGCTGGCCACGGGCGTGGGCAAGACCCGCCTG
ATGGGAGCCTTCATCGCCTACCTGCATCTGGCGCACGGCATCAAGAACTTCTTCGTGCTCGCTCCCAACCTGACGATCTA
CAACAAACTCATCACGGACTTCACGCGCAACACGCCAAAGTACGTGTTCAAGGGGATCGCCGAATTCGCGCAGCAACCGC
CGCTGATCATCACCGGCGACAACTACGACCAGACCGGTGCGGCGGTAGACGAGCAGTCAATGGGCTTCGCTCACGACGTG
CGTATCAACATCTTCAACATCTCCAAGATCAACTCCGAGGTGCGCGGCGGCAAGGAGCCGCGCATCAAGCGGATGAAGGA
AGTGCTGGGCGACAGCTACTTCAACCACCTGGCTAGTCTTTCTGACCTGGTGCTGCTGATGGACGAGTCGCACCGCTACC
GGGCCAGCGCCGGCGTGCGCGCCATCAACGAACTCAAGCCGCTATTCGGTCTGGAAGTGACGGCGACGCCGTTCGTCGAG
TCCAGCCGTGGGCCAGTCCCGTTCAAGAACGTGGTGATGGACTACCCGCTGGCGCGCGCGATGGAGGATGGCTTCGTCAA
GGAGCCTGCTGTGGTCACCCAGCGCAACTTCGACGCCAAAGCGCACACGCCCGAGGAGATCGAGAAGACCAAGCTTGAAG
ACGGTGTGCGCCTGCACGAGACGACCAAGGTCGAGCTGCTCACCTATGCCCGCGAGAACGGCGTCAAGCCGGTCAAGCCC
TTCATGCTCGTCATCGCTCGCGATACCACGCACGCGGGGCAACTCTTGGCACTTCTGGAGTCGGAAGCCTTCTACGAGGG
GCGTTACCAGGGCAAGGTGATCCAGGTCGATTCCAGCCGTACCGGCGCGGAGGAAGAAGAGATGATCACGCGCCTGCTAG
CCGTGGAGAGCGTGGACGAGCCGACCGAGATCGTGATTCACGTCAACATGCTCAAGGAGGGCTGGGACGTAACCAACCTC
TATACCATCGTGCCGCTGCGCGCCGCCAATGCCCGCACGTTGATCGAACAGTCCATCGGGCGTGGCCTGCGATTGCCCTA
CGGCAAACGCACGGGCGTCGCGTCGGTGGATCGCTTGAACATCGTCGCGCACGACAAGTTCCAGGAGATCATCGACGAGG
CCAACCGCGGCGACTCGCCGATTCGCCTGAAGCAGGTCATCCTCGATGCGCCGAGCGCCGACGACAAGAAGGTCAGCGTG
CAGGTCGAGTCCGGGGCGGCGGCGCGTCTCGGTTTGACGGACGCACCGGTCGTGATCACAGGGGCTTCAGCCACTGACAG
TGGAGCGGAAGTCCCCGCGCCCAAGCCGGTGTTCACCACGGAGGCGGAGAAGCAGGCCGCGCGTGTGGTCATGGACGTCA
TCGGCAAGTACGAGGTCAAGCGCGATCTAGTGCCCACCAGCAGCGCGCTGCTGAAACCAGAAGTGCAGAAGGAAATCCTC
GCGGAGGTGGCGGAGCGGTTGAAGCCGCTGCAAGGCGAATTGCTCGCGGGCGTGGATGAATCAGTCCCTGCACTTGACTT
GTCAGCCGTGGTGGCGAAGACCACCGAGATCGTGGTGCAGCAGACCATCGACATCCCGCGCATCGCAGTGGTGCCGACTG
GCGAGGTCACGACGGGCTTCCACGCCTTCAAGCTGGATGTGAGCCAGCTCCATCTCCAGCCGGGTGAGCGCGAGATCGTC
ATCCATAACCTGCGCACCAACGAGCAGGATACCCTGGCCGCCGAAGTTGGGCTCAAGGAGCAGCGCCCGGAGGACTACAT
CGTCCACGCGCTGGTGGACTTCGACGACATCGACTACTTCACCCACGCCGATCTGCTCTACGACCTCGCGGGCCAGATGG
TGCAACACCTGCGCGGCTACCTGTCCGAGGACGAAGCCATCAGCGTCCTCGATCGTGACCGCCGCCTGATCGCACGGGAA
ATCCACGCGCAGATGATGGCCCACTTCTGGGAAGAGGCGACCGACTACGAGGTGCAGGTCAGTCGCGGCTTCACCGAACT
CAAGCCGTGCAACTACACCGCCACGGCAGGTCAGACGGCCCACCACTTCCGGGAGACCGTGACCGAGACCAGCCGCATCA
AGCAGATGCTGTTCGGCGGATTCGCGCGCTGCTTGTATCCGCTGCAGAAGTTCGATTCGGACACGGAGCGGCGCTTCGCC
ATCATTCTGGAGCGCGATGCCCTGAAGTGGTTCAAGCCCGCGAAGGGGCAGTTCCAGATCTATTACAAGCTTGGCACCGA
GCAGCCGGAGTACATCCCCGACTTCGTGGCCGAGACGGACGCGACCGTCTTCATGGTTGAGACCAAGGCACGTGCCGAGG
TCAACTCCCCGGAGGTTCAGGCCAAGACCGCTGCTGCAACGCGCTGGTGCAGCCACGCTTCCGATTACGCCGCGAAGGTA
GGCGCCAAACCGTGGAAGTACTTGCTGGTGCCCCACGACGAAATCAATGAGTCGAAGCGGCTCACGGATTACCTGCGCTT
TGAGGGCATAACATGA

Upstream 100 bases:

>100_bases
CCGAGCCTGCGCCCCCTGGCAATAGCTTCAAGAACACTAAAAGCAGAAAAGCGGCCCTCGCTAACGCGGGACAGGGCGGC
CTGTTTGGGGAGAACGAATA

Downstream 100 bases:

>100_bases
TTTGGCTGCCGTTGCCCGAACAATTGGGTTCCAATGCGCGAGTCGGATAGGCAAGTGCAGGCGAACGCTAACTCTGCTGA
GATGGGGAAACATCCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Type III Restriction- Helicase Subunit; DNA Restriction- System Restriction; Type III Restriction; PstII Restriction- Res Subunit; Type III Restriction Res Subunit Family; Type III Restriction-; Type III Restriction- System R Subunit

Number of amino acids: Translated: 911; Mature: 911

Protein sequence:

>911_residues
MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDFEREFPSLCFALATGVGKTRL
MGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDV
RINIFNISKINSEVRGGKEPRIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE
SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHETTKVELLTYARENGVKPVKP
FMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSRTGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNL
YTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV
QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVKRDLVPTSSALLKPEVQKEIL
AEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQQTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIV
IHNLRTNEQDTLAAEVGLKEQRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE
IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGGFARCLYPLQKFDSDTERRFA
IILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETDATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKV
GAKPWKYLLVPHDEINESKRLTDYLRFEGIT

Sequences:

>Translated_911_residues
MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDFEREFPSLCFALATGVGKTRL
MGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDV
RINIFNISKINSEVRGGKEPRIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE
SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHETTKVELLTYARENGVKPVKP
FMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSRTGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNL
YTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV
QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVKRDLVPTSSALLKPEVQKEIL
AEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQQTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIV
IHNLRTNEQDTLAAEVGLKEQRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE
IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGGFARCLYPLQKFDSDTERRFA
IILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETDATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKV
GAKPWKYLLVPHDEINESKRLTDYLRFEGIT
>Mature_911_residues
MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDFEREFPSLCFALATGVGKTRL
MGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDV
RINIFNISKINSEVRGGKEPRIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE
SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHETTKVELLTYARENGVKPVKP
FMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSRTGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNL
YTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV
QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVKRDLVPTSSALLKPEVQKEIL
AEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQQTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIV
IHNLRTNEQDTLAAEVGLKEQRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE
IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGGFARCLYPLQKFDSDTERRFA
IILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETDATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKV
GAKPWKYLLVPHDEINESKRLTDYLRFEGIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101554; Mature: 101554

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDF
CCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EREFPSLCFALATGVGKTRLMGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCHH
YVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDVRINIFNISKINSEVRGGKEP
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEEEEEEEHHHCHHHCCCCCH
RIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC
SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHE
CCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEC
TTKVELLTYARENGVKPVKPFMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSR
CCEEEEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNLYTIVPLRAANARTLIEQSIG
CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCEEEEEEEEECCCHHHHHHHHHC
RGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV
CCCCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCEEEE
QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVK
EEECCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDLVPTSSALLKPEVQKEILAEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQ
HCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIVIHNLRTNEQDTLAAEVGLKE
HHCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCC
QRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGG
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FARCLYPLQKFDSDTERRFAIILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETD
HHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCC
ATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKVGAKPWKYLLVPHDEINESKR
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCHHH
LTDYLRFEGIT
HHHHHHHCCCC
>Mature Secondary Structure
MNARVLHAVTGRLSLRPPQAESLTKLVRALDAAPELLGHEQDVSAILSTLKAEFSTLEDF
CCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EREFPSLCFALATGVGKTRLMGAFIAYLHLAHGIKNFFVLAPNLTIYNKLITDFTRNTPK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCHH
YVFKGIAEFAQQPPLIITGDNYDQTGAAVDEQSMGFAHDVRINIFNISKINSEVRGGKEP
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEEEEEEEHHHCHHHCCCCCH
RIKRMKEVLGDSYFNHLASLSDLVLLMDESHRYRASAGVRAINELKPLFGLEVTATPFVE
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC
SSRGPVPFKNVVMDYPLARAMEDGFVKEPAVVTQRNFDAKAHTPEEIEKTKLEDGVRLHE
CCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEC
TTKVELLTYARENGVKPVKPFMLVIARDTTHAGQLLALLESEAFYEGRYQGKVIQVDSSR
CCEEEEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TGAEEEEMITRLLAVESVDEPTEIVIHVNMLKEGWDVTNLYTIVPLRAANARTLIEQSIG
CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCEEEEEEEEECCCHHHHHHHHHC
RGLRLPYGKRTGVASVDRLNIVAHDKFQEIIDEANRGDSPIRLKQVILDAPSADDKKVSV
CCCCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCEEEE
QVESGAAARLGLTDAPVVITGASATDSGAEVPAPKPVFTTEAEKQAARVVMDVIGKYEVK
EEECCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDLVPTSSALLKPEVQKEILAEVAERLKPLQGELLAGVDESVPALDLSAVVAKTTEIVVQ
HCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QTIDIPRIAVVPTGEVTTGFHAFKLDVSQLHLQPGEREIVIHNLRTNEQDTLAAEVGLKE
HHCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCC
QRPEDYIVHALVDFDDIDYFTHADLLYDLAGQMVQHLRGYLSEDEAISVLDRDRRLIARE
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IHAQMMAHFWEEATDYEVQVSRGFTELKPCNYTATAGQTAHHFRETVTETSRIKQMLFGG
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FARCLYPLQKFDSDTERRFAIILERDALKWFKPAKGQFQIYYKLGTEQPEYIPDFVAETD
HHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCC
ATVFMVETKARAEVNSPEVQAKTAAATRWCSHASDYAAKVGAKPWKYLLVPHDEINESKR
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCHHH
LTDYLRFEGIT
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA