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The map label for this gene is trfA [H]

Identifier: 74316948

GI number: 74316948

Start: 986128

End: 987105

Strand: Direct

Name: trfA [H]

Synonym: Tbd_0930

Alternate gene names: 74316948

Gene position: 986128-987105 (Clockwise)

Preceding gene: 74316947

Following gene: 74316950

Centisome position: 33.89

GC content: 61.45

Gene sequence:

>978_bases
ATGCCTGGGTTGCCCGCAGCCGATTCCCCGTGCGATTTTGTCAGCGTAGTAAAGAGGCTAGAGGAGCTAGCCAGAAAACG
TGGACGGCTAGCGGGTGCTCCCCCGGGAAACAACGTCGCGCAGTTGCCCATCTGGCCGGAGCCGACGCGAGGTGTACCAA
ACGTCGCGCTTCGGTCGGCCCTGTTCGGCGCGATCGCGAAGGGCAAGCGACGTTACGTGGAACGGGAGCAGCTCGCCGCC
CTCGGTGATATACAGATCCTTTACACCGGACAGCGGCTCGATCAAGGCGACCTCGACGCCTACCAGAGCGTGCTGCATGC
CGCCCGCCACCAAGCAATGGGTGAGCAGTGCCGGGTAACGTCCTATGCCTTGCTGAAACTGATGGGCAAGACAGATAGCG
GTAAGAACCGAGCGACGCTGCACAACCGGCTTACCCGATTACGGGCGAACGCTGTGGAGATCAAACACGGCCGGTACAAC
TACATCGGCGGCTTGATCAACGAGGCGTTCAGGTGCGAGAAGACCCAGGAATGGGTGATCGTGCTGACCCCCAAGCTGCG
GGTTCTGTTCGCGGCGGACGAGTTTACTCATATTGAATGGGCTGTGCGCCACGCGTTGGACGGCCAGCCGCTGGCCCAAT
GGCTGCACGGGTTCTACGCGAGCCATGCCAAGCCATATCCGATGAAGATCGAGACGTTGCACCGGCTCTGCGGTAGCGAG
ACCGCCGACCTCTGGAAATTCGCCCAGACACTGCGCAAGGCGCTGAACGCAGTGACCGAGGCCAGCGCAGTCCACGGCGA
AAGGTTCAACTACACTGTCCGGGGCGACGTCGTACATATCGAAAAGATAGCCAAGGGGACACAGCGGCGTCACTTGGCCA
AGAAGGCAGCCGGATCCTGGAAGGCGTGCGCGCCTACGCCGTTACAGCAGTTAGGCGATACCGTTCTAGCAGGTAGGCGC
TACCGTTCCGGCGGGTAG

Upstream 100 bases:

>100_bases
AGATCGGCAAGCGGAAATCAGGTCTACTGTTTTCGGAGCTGGAACGGTGGATCGAGGATCGCCACGCGAGCCACAAAATT
AGGCAGGGGGGAAGGTGAGC

Downstream 100 bases:

>100_bases
GCGATGCCGTTCTAGCCGGTAGGCTGTACCGTTCTGGCAGGTAGCCTACCCGCAGGTCGGGCAGCCCTCGAAGCCTTTAC
TGGCGCAGGTTTACGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MPGLPAADSPCDFVSVVKRLEELARKRGRLAGAPPGNNVAQLPIWPEPTRGVPNVALRSALFGAIAKGKRRYVEREQLAA
LGDIQILYTGQRLDQGDLDAYQSVLHAARHQAMGEQCRVTSYALLKLMGKTDSGKNRATLHNRLTRLRANAVEIKHGRYN
YIGGLINEAFRCEKTQEWVIVLTPKLRVLFAADEFTHIEWAVRHALDGQPLAQWLHGFYASHAKPYPMKIETLHRLCGSE
TADLWKFAQTLRKALNAVTEASAVHGERFNYTVRGDVVHIEKIAKGTQRRHLAKKAAGSWKACAPTPLQQLGDTVLAGRR
YRSGG

Sequences:

>Translated_325_residues
MPGLPAADSPCDFVSVVKRLEELARKRGRLAGAPPGNNVAQLPIWPEPTRGVPNVALRSALFGAIAKGKRRYVEREQLAA
LGDIQILYTGQRLDQGDLDAYQSVLHAARHQAMGEQCRVTSYALLKLMGKTDSGKNRATLHNRLTRLRANAVEIKHGRYN
YIGGLINEAFRCEKTQEWVIVLTPKLRVLFAADEFTHIEWAVRHALDGQPLAQWLHGFYASHAKPYPMKIETLHRLCGSE
TADLWKFAQTLRKALNAVTEASAVHGERFNYTVRGDVVHIEKIAKGTQRRHLAKKAAGSWKACAPTPLQQLGDTVLAGRR
YRSGG
>Mature_324_residues
PGLPAADSPCDFVSVVKRLEELARKRGRLAGAPPGNNVAQLPIWPEPTRGVPNVALRSALFGAIAKGKRRYVEREQLAAL
GDIQILYTGQRLDQGDLDAYQSVLHAARHQAMGEQCRVTSYALLKLMGKTDSGKNRATLHNRLTRLRANAVEIKHGRYNY
IGGLINEAFRCEKTQEWVIVLTPKLRVLFAADEFTHIEWAVRHALDGQPLAQWLHGFYASHAKPYPMKIETLHRLCGSET
ADLWKFAQTLRKALNAVTEASAVHGERFNYTVRGDVVHIEKIAKGTQRRHLAKKAAGSWKACAPTPLQQLGDTVLAGRRY
RSGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010751 [H]

Pfam domain/function: PF07042 TrfA [H]

EC number: NA

Molecular weight: Translated: 36124; Mature: 35993

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLPAADSPCDFVSVVKRLEELARKRGRLAGAPPGNNVAQLPIWPEPTRGVPNVALRSA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHH
LFGAIAKGKRRYVEREQLAALGDIQILYTGQRLDQGDLDAYQSVLHAARHQAMGEQCRVT
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SYALLKLMGKTDSGKNRATLHNRLTRLRANAVEIKHGRYNYIGGLINEAFRCEKTQEWVI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCEEE
VLTPKLRVLFAADEFTHIEWAVRHALDGQPLAQWLHGFYASHAKPYPMKIETLHRLCGSE
EECCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
TADLWKFAQTLRKALNAVTEASAVHGERFNYTVRGDVVHIEKIAKGTQRRHLAKKAAGSW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCC
KACAPTPLQQLGDTVLAGRRYRSGG
CCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PGLPAADSPCDFVSVVKRLEELARKRGRLAGAPPGNNVAQLPIWPEPTRGVPNVALRSA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHH
LFGAIAKGKRRYVEREQLAALGDIQILYTGQRLDQGDLDAYQSVLHAARHQAMGEQCRVT
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SYALLKLMGKTDSGKNRATLHNRLTRLRANAVEIKHGRYNYIGGLINEAFRCEKTQEWVI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCEEE
VLTPKLRVLFAADEFTHIEWAVRHALDGQPLAQWLHGFYASHAKPYPMKIETLHRLCGSE
EECCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
TADLWKFAQTLRKALNAVTEASAVHGERFNYTVRGDVVHIEKIAKGTQRRHLAKKAAGSW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCC
KACAPTPLQQLGDTVLAGRRYRSGG
CCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6374158 [H]