| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316944
Identifier: 74316944
GI number: 74316944
Start: 983107
End: 983757
Strand: Reverse
Name: 74316944
Synonym: Tbd_0926
Alternate gene names: NA
Gene position: 983757-983107 (Counterclockwise)
Preceding gene: 74316945
Following gene: 74316943
Centisome position: 33.81
GC content: 50.23
Gene sequence:
>651_bases ATGCAGGACGATGACGAAATAGTTCGCAGCCACTGCAATACCTGTGGGAGGGTCACGAAACATCTTGTTCTCCACGTTAA GGAGACCCGCGATAGCGAGGAGTTAGAAGACTATGGCCCTATATTTTGGGATAACACTTACGAGCTGTTGGAGTGCCGCG GCTGCGAGTCAATTAGCCTGAAGCACACGACCATCTTTGAGCCGACGGAAGAAGTTGACGTAACAATTTATCCGCCTCGC GTGACGAGACGAAAACCGCACTGGTTTTATCAAATCCCCACCTCAGCTCGCACACTCCTTCAGCAGATTTACCAAGCTCT GGACGCAAACAGCCGTGGGCTAGCATTGATGGGCGCTAGAGCCGTTCTCGACATGGTTCTGGTTGAGACTGTAGGGGATC AAGGTTCATTCAGCGCCAAACTGGATGCTCTGGAAAAACATGGGGCAATTGGCGCAAAGAGTAAGGAAATCCTTCACGCC GCGTTAGATGCAGGCAACGCTGCATCGCACCGAGGGTATCAACCAACTACAGACGACATCAATGCCGTGATGGACATTGT TGAGAACCTACTTCAAGCGGTTTATCACCTTAAGACCCTAGCTGAAAGCCTGAAAAAGGCTACACCGACACGTTCACAAA AAAAGAAATAG
Upstream 100 bases:
>100_bases TCCAAAGATTCCCCCAGGCAGGCATTTAATCCGCATTATCATTACGAAGCGCAACGGTACCCCTTAACTTCAATGTCGTG AAAACATTCCGGGCCATTAC
Downstream 100 bases:
>100_bases ATACACGCTGCATGACCATCATGCGGTCACTCTGAAAAACTAATGCTAACGATAAAGAAGTATTCCAATGACCATAATCA GTGACTTTCTTTCCAGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MQDDDEIVRSHCNTCGRVTKHLVLHVKETRDSEELEDYGPIFWDNTYELLECRGCESISLKHTTIFEPTEEVDVTIYPPR VTRRKPHWFYQIPTSARTLLQQIYQALDANSRGLALMGARAVLDMVLVETVGDQGSFSAKLDALEKHGAIGAKSKEILHA ALDAGNAASHRGYQPTTDDINAVMDIVENLLQAVYHLKTLAESLKKATPTRSQKKK
Sequences:
>Translated_216_residues MQDDDEIVRSHCNTCGRVTKHLVLHVKETRDSEELEDYGPIFWDNTYELLECRGCESISLKHTTIFEPTEEVDVTIYPPR VTRRKPHWFYQIPTSARTLLQQIYQALDANSRGLALMGARAVLDMVLVETVGDQGSFSAKLDALEKHGAIGAKSKEILHA ALDAGNAASHRGYQPTTDDINAVMDIVENLLQAVYHLKTLAESLKKATPTRSQKKK >Mature_216_residues MQDDDEIVRSHCNTCGRVTKHLVLHVKETRDSEELEDYGPIFWDNTYELLECRGCESISLKHTTIFEPTEEVDVTIYPPR VTRRKPHWFYQIPTSARTLLQQIYQALDANSRGLALMGARAVLDMVLVETVGDQGSFSAKLDALEKHGAIGAKSKEILHA ALDAGNAASHRGYQPTTDDINAVMDIVENLLQAVYHLKTLAESLKKATPTRSQKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24233; Mature: 24233
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDDDEIVRSHCNTCGRVTKHLVLHVKETRDSEELEDYGPIFWDNTYELLECRGCESISL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCC KHTTIFEPTEEVDVTIYPPRVTRRKPHWFYQIPTSARTLLQQIYQALDANSRGLALMGAR CCCEEECCCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEHHHHH AVLDMVLVETVGDQGSFSAKLDALEKHGAIGAKSKEILHAALDAGNAASHRGYQPTTDDI HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH NAVMDIVENLLQAVYHLKTLAESLKKATPTRSQKKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQDDDEIVRSHCNTCGRVTKHLVLHVKETRDSEELEDYGPIFWDNTYELLECRGCESISL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCC KHTTIFEPTEEVDVTIYPPRVTRRKPHWFYQIPTSARTLLQQIYQALDANSRGLALMGAR CCCEEECCCCCCCEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEHHHHH AVLDMVLVETVGDQGSFSAKLDALEKHGAIGAKSKEILHAALDAGNAASHRGYQPTTDDI HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH NAVMDIVENLLQAVYHLKTLAESLKKATPTRSQKKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA