| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316893
Identifier: 74316893
GI number: 74316893
Start: 925677
End: 926090
Strand: Reverse
Name: 74316893
Synonym: Tbd_0875
Alternate gene names: NA
Gene position: 926090-925677 (Counterclockwise)
Preceding gene: 74316894
Following gene: 74316892
Centisome position: 31.83
GC content: 59.9
Gene sequence:
>414_bases ATGCAAAACGTCGACTACGCCAATTTCGATTTCGGTGAACGCCTCAACGGCTTCGTCCGCGAGTTGATGAACTACGGCGG CGCGCCGCGTACCGAAGCCGACCTGACCGAAGGTCAGAAAGTCTTCGTCCGCGCCGTCAAGCGCGAGATGGTCAAATACG CGGATCCGAACCGCCAGGGCTACCCGCATAACCTGCTCGAGCAGATGGAATCCTTCACCCGCACCGTCGGCGACCTGCAC AATTCCTACTTCGATTCGGGGATGCGCAAGGTAAGCGATTGCCTCTACAACCGCTGGAAAACGCTGTACGAGGACACGAA AAAACTGGCCGCTGCGGGCGCCGCGAACAGGCCCGCCTGGGTCGACGTCATCAAGACCGAGCCGACGGACATGCCCGCGT TCTTCGACGCATAA
Upstream 100 bases:
>100_bases GTGCGGCCGGCTCGAGGAGACGCTGGACAGCGGCACGGCGCGGCGTAGGATAGGCATCGGAAGCACATCCAGTCTGAGCA CCATCTGAAACGGAGGAGTT
Downstream 100 bases:
>100_bases GCCATTGTTTCAGAATAAAAAAGCCCGGACTATCCGGGCTTTTTTATCGCCTCGACTAAATCAAACCCGCTTATCCTCAA ATAAAAATAAAGCATTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MQNVDYANFDFGERLNGFVRELMNYGGAPRTEADLTEGQKVFVRAVKREMVKYADPNRQGYPHNLLEQMESFTRTVGDLH NSYFDSGMRKVSDCLYNRWKTLYEDTKKLAAAGAANRPAWVDVIKTEPTDMPAFFDA
Sequences:
>Translated_137_residues MQNVDYANFDFGERLNGFVRELMNYGGAPRTEADLTEGQKVFVRAVKREMVKYADPNRQGYPHNLLEQMESFTRTVGDLH NSYFDSGMRKVSDCLYNRWKTLYEDTKKLAAAGAANRPAWVDVIKTEPTDMPAFFDA >Mature_137_residues MQNVDYANFDFGERLNGFVRELMNYGGAPRTEADLTEGQKVFVRAVKREMVKYADPNRQGYPHNLLEQMESFTRTVGDLH NSYFDSGMRKVSDCLYNRWKTLYEDTKKLAAAGAANRPAWVDVIKTEPTDMPAFFDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15730; Mature: 15730
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNVDYANFDFGERLNGFVRELMNYGGAPRTEADLTEGQKVFVRAVKREMVKYADPNRQG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC YPHNLLEQMESFTRTVGDLHNSYFDSGMRKVSDCLYNRWKTLYEDTKKLAAAGAANRPAW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VDVIKTEPTDMPAFFDA EEEECCCCCCCCCCCCC >Mature Secondary Structure MQNVDYANFDFGERLNGFVRELMNYGGAPRTEADLTEGQKVFVRAVKREMVKYADPNRQG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC YPHNLLEQMESFTRTVGDLHNSYFDSGMRKVSDCLYNRWKTLYEDTKKLAAAGAANRPAW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VDVIKTEPTDMPAFFDA EEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA