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The map label for this gene is yfdZ [C]

Identifier: 74316786

GI number: 74316786

Start: 811618

End: 812787

Strand: Reverse

Name: yfdZ [C]

Synonym: Tbd_0768

Alternate gene names: 74316786

Gene position: 812787-811618 (Counterclockwise)

Preceding gene: 74316787

Following gene: 74316785

Centisome position: 27.93

GC content: 70.51

Gene sequence:

>1170_bases
ATGACGGCGCGGCGACCGCGGACCGCGACCCGGGCCGACGCCATCGCGCCCTTCCACGTCATGGACATCCTCGCCCGGGC
GCAGGCGCTCGAGGCCGCCGGACGCGACATCATCCACCTCGAAATCGGCGAGCCCGACTTCGCCACGCCGGGGCCGATCG
TCGAAGCCGGCATCGCCGCTTTACGCGCAGGCCATACCCGCTACACCGGCGCGCTCGGCCTGCCTGCGCTGCGCCGGGCC
ATCGCGGAATTCCATCGCACCTACTGGGGCACACCGGTCGAGGCCGAGCGCGTCGTCGTCACGCCGGGCGCCTCGGGCGC
GCTCCTGCTCGTGCTCGGGCTTCTAGCCGGCCCCGGCGACGAGGTACTGATGGCCGACCCCGGCTACCCCTGCAATCGCA
ACTTCGCGCAATTCTGCGATGCGCGCGCGGTCGAAATCCCGGTCGACGCCGCGAGCGGCTTCCAGCTCACGCGCGAAGCG
ATCGAGCGCCACGCAACCCCGGCGACACGGGCCGTGCTGATCGCCAACCCGTCGAATCCCACCGGCACGACGATCGACCC
CGAGGCCCTCGCGGACATCCATGCCTGGTGCGCGGCGCGCGGCATCGCGCTGATCGTCGACGAGATCTATCTGGCACTCA
CCTACGACGGCGACACGCACAGCGCCGCGCGCTGGGACGACGTGTTCGTGATCAACAGCTTTTCGAAGTGTTTCCTGATG
ACGGGCTGGCGACTTGGCTGGCTGGTCGCGCCAGCCTGGGCGCTGGCCGCACTCGAACGGCTCGCGCAGAATCTTTTCCT
CGCGCCCCCCACGCCCGCCCAGCACGCCGCGCTCGCCGGCTTCGAACCCGCGACGCTTGCCATCCTCGAGACGCACAAGG
CCGAACTGCGTGCGCGCCGCGACTTTCTGCTGCCGGCGCTCCGTGCACGCGGCTTCGCGATTCCGGTGATCCCCCACGGC
GCGTTCTATCTCTACGCCGATTGCAGCGCGCTGGCCGCCGACAGCCAAGTGCTCGCCGGTCTGCTGCTCGAGCAGGCCGG
CGTCGCGACGACGCCGGGCGTGGATTTCGGCCGCCACGACCCCGCGCGCTATCTTCGGATCGCCTACACCCAGCCTAAAC
CGCGGCTCGACGAGGCCCTCGCGCGCATCGACCGTTTCTTGCGCCCATGA

Upstream 100 bases:

>100_bases
TCGAGCTGCCGCACCTGCTGCACGCCGAGTATCCGGCGGTGTACCGGCAAATGGCGCTGTTCTATCGTCAGGATCCGCGC
GCGCGCACGAGGTCCGGTGC

Downstream 100 bases:

>100_bases
AAAAACCGGCCCGAAGGCCGGTTTTTTCGTGTTCCTGACCCGGAATTACTGGGCGGGAGCGGGTTCTGCAGGAGCAGCTT
CGCCAGCCGGTGCTTCGGCA

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTARRPRTATRADAIAPFHVMDILARAQALEAAGRDIIHLEIGEPDFATPGPIVEAGIAALRAGHTRYTGALGLPALRRA
IAEFHRTYWGTPVEAERVVVTPGASGALLLVLGLLAGPGDEVLMADPGYPCNRNFAQFCDARAVEIPVDAASGFQLTREA
IERHATPATRAVLIANPSNPTGTTIDPEALADIHAWCAARGIALIVDEIYLALTYDGDTHSAARWDDVFVINSFSKCFLM
TGWRLGWLVAPAWALAALERLAQNLFLAPPTPAQHAALAGFEPATLAILETHKAELRARRDFLLPALRARGFAIPVIPHG
AFYLYADCSALAADSQVLAGLLLEQAGVATTPGVDFGRHDPARYLRIAYTQPKPRLDEALARIDRFLRP

Sequences:

>Translated_389_residues
MTARRPRTATRADAIAPFHVMDILARAQALEAAGRDIIHLEIGEPDFATPGPIVEAGIAALRAGHTRYTGALGLPALRRA
IAEFHRTYWGTPVEAERVVVTPGASGALLLVLGLLAGPGDEVLMADPGYPCNRNFAQFCDARAVEIPVDAASGFQLTREA
IERHATPATRAVLIANPSNPTGTTIDPEALADIHAWCAARGIALIVDEIYLALTYDGDTHSAARWDDVFVINSFSKCFLM
TGWRLGWLVAPAWALAALERLAQNLFLAPPTPAQHAALAGFEPATLAILETHKAELRARRDFLLPALRARGFAIPVIPHG
AFYLYADCSALAADSQVLAGLLLEQAGVATTPGVDFGRHDPARYLRIAYTQPKPRLDEALARIDRFLRP
>Mature_388_residues
TARRPRTATRADAIAPFHVMDILARAQALEAAGRDIIHLEIGEPDFATPGPIVEAGIAALRAGHTRYTGALGLPALRRAI
AEFHRTYWGTPVEAERVVVTPGASGALLLVLGLLAGPGDEVLMADPGYPCNRNFAQFCDARAVEIPVDAASGFQLTREAI
ERHATPATRAVLIANPSNPTGTTIDPEALADIHAWCAARGIALIVDEIYLALTYDGDTHSAARWDDVFVINSFSKCFLMT
GWRLGWLVAPAWALAALERLAQNLFLAPPTPAQHAALAGFEPATLAILETHKAELRARRDFLLPALRARGFAIPVIPHGA
FYLYADCSALAADSQVLAGLLLEQAGVATTPGVDFGRHDPARYLRIAYTQPKPRLDEALARIDRFLRP

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=322, Percent_Identity=27.9503105590062, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI169881279, Length=322, Percent_Identity=27.9503105590062, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI56713254, Length=328, Percent_Identity=27.7439024390244, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI56713256, Length=328, Percent_Identity=27.7439024390244, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI4507369, Length=410, Percent_Identity=24.8780487804878, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI169881281, Length=244, Percent_Identity=25, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1788722, Length=399, Percent_Identity=28.3208020050125, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1788627, Length=388, Percent_Identity=27.5773195876289, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1786816, Length=388, Percent_Identity=28.6082474226804, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1787710, Length=208, Percent_Identity=28.8461538461538, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71994472, Length=391, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71994476, Length=391, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17567369, Length=319, Percent_Identity=25.0783699059561, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17567663, Length=381, Percent_Identity=25.4593175853018, Blast_Score=89, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322401, Length=386, Percent_Identity=23.3160621761658, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6320317, Length=356, Percent_Identity=24.438202247191, Blast_Score=83, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6323118, Length=359, Percent_Identity=23.9554317548747, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573069, Length=356, Percent_Identity=24.1573033707865, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24646114, Length=356, Percent_Identity=24.1573033707865, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28573067, Length=356, Percent_Identity=24.1573033707865, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28573065, Length=356, Percent_Identity=24.1573033707865, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI18859735, Length=380, Percent_Identity=25.7894736842105, Blast_Score=92, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41875; Mature: 41744

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRPRTATRADAIAPFHVMDILARAQALEAAGRDIIHLEIGEPDFATPGPIVEAGIAA
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHH
LRAGHTRYTGALGLPALRRAIAEFHRTYWGTPVEAERVVVTPGASGALLLVLGLLAGPGD
HHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCC
EVLMADPGYPCNRNFAQFCDARAVEIPVDAASGFQLTREAIERHATPATRAVLIANPSNP
CEEEECCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCC
TGTTIDPEALADIHAWCAARGIALIVDEIYLALTYDGDTHSAARWDDVFVINSFSKCFLM
CCCCCCHHHHHHHHHHHHHCCHHEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCHHHHH
TGWRLGWLVAPAWALAALERLAQNLFLAPPTPAQHAALAGFEPATLAILETHKAELRARR
CCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHH
DFLLPALRARGFAIPVIPHGAFYLYADCSALAADSQVLAGLLLEQAGVATTPGVDFGRHD
HHHHHHHHHCCCEEEEECCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PARYLRIAYTQPKPRLDEALARIDRFLRP
CCCEEEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TARRPRTATRADAIAPFHVMDILARAQALEAAGRDIIHLEIGEPDFATPGPIVEAGIAA
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHH
LRAGHTRYTGALGLPALRRAIAEFHRTYWGTPVEAERVVVTPGASGALLLVLGLLAGPGD
HHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCC
EVLMADPGYPCNRNFAQFCDARAVEIPVDAASGFQLTREAIERHATPATRAVLIANPSNP
CEEEECCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCC
TGTTIDPEALADIHAWCAARGIALIVDEIYLALTYDGDTHSAARWDDVFVINSFSKCFLM
CCCCCCHHHHHHHHHHHHHCCHHEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCHHHHH
TGWRLGWLVAPAWALAALERLAQNLFLAPPTPAQHAALAGFEPATLAILETHKAELRARR
CCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHH
DFLLPALRARGFAIPVIPHGAFYLYADCSALAADSQVLAGLLLEQAGVATTPGVDFGRHD
HHHHHHHHHCCCEEEEECCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PARYLRIAYTQPKPRLDEALARIDRFLRP
CCCEEEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]