| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316767
Identifier: 74316767
GI number: 74316767
Start: 793606
End: 794862
Strand: Direct
Name: 74316767
Synonym: Tbd_0749
Alternate gene names: NA
Gene position: 793606-794862 (Clockwise)
Preceding gene: 74316766
Following gene: 74316768
Centisome position: 27.27
GC content: 69.05
Gene sequence:
>1257_bases ATGGCTGACGCCGACGACGCCGCGCTCGCGCCGATCCTGACCAAGCTCGCCGCGGCGCGCACGCGGCTCATCATGGAGCG GCCCTTCCTCGGCGCGCTCGTCATGCATCTGCCGCTCAAGGTCGGCGGCGAGTGGTGCACGACGACCGGCACCGACGCGC AGGCGTTCTACTTCAACCCGAAGTTCATCGACAACCTCAACCTCGCGCAGACGCAATTCGTGCTTGCGCACGAGGCGATG CACTGCGCGATGGGCCATACCCATCGCCGCCAGCACCGCGTCAAGCGGCGCTGGGACGTCGCCTGCGACCACGCCGTCAA CCTGATCCTGATCGAGGAGGGGCTCAAGCCGCCGCTGCACGGCATCCTCGCCGACCAGAACTTCATGACGCTGTCGGCCG AGGAAATCTATCCGCTGATCCCCGAGGACACGCCCGAGGAATCCTTCGACCAGCACATCTTCGACGACGACAACGAAGCC GGGGCGAGTCCCGACGACAGCCAGCGCCAGGACAACCCCGACGCCGGCGATGCGGGCGGGCAGGGCAAGGAGGGCCAGAG CGAGGCGGAGCAGACGCAGGGCAGCGGCAGCCAGCCGTCGCAAAAGCCGAACGAGCTTTCGCCGTCCGAGCGCGAGGAGC TCGCCGAGCAATGGAAGAACCGCCTCGCCGCGGCCGCGCAGGCGGCGCGCCAGGCCGGCAAGCTGTCGCAGTCGATGATG CGCTGGGTCGACGGCATGCTCGCCCCCAACCTGCCGTGGCGGGCACTGCTCGCGCGCTTCTTCGCGGTCAACCAGCGCGA CGATTACTCCTGGCGCCGGCCCTCGCGCCGCGAAGGCGACGCGCTGCTGCCGCGTCTGTCGAGCGAGGGGCTCGACGTCG TCGCGGCGATCGACACGAGCGGCTCGATCAGCGACGAGGAGCTGCGCGAGTTCGTCAGCGAGCTCGACGCGCTCAAAGGC CAGGTGCGCGCCAAGGTCACGCTGCTCGCCTGTGACAACCACGTCGCCGACGCGGCACCCTGGGAGTTCGAGCCCTGGGA TACGATGCAGCTGCCGGTCGAGATCGCGGGCGGCGGCGGCACCGACTTCCGGCCGGTCTTCGACTGGGTCGAGAACGAAA ACCGCAACCCCGCCATGCTCGTGTATTTCACCGACGCCGAGGGCGACTTCCCCGCGCTGCCGCCGAACTACCCCGTGATC TGGCTCGTCAAGGGCAAAGGCGCCGTGCCCTGGGGCGAGCGGGTGCAACTGAACTGA
Upstream 100 bases:
>100_bases CCTCCACCGCGCGGTCGGGCGGCCGCTCTTCGCGGTGCCGGCCTTCGCCGAGTGGGCCAACAGCATCACCGACCTCGTCC TGTACGAACATTGATCCGCC
Downstream 100 bases:
>100_bases GCATGACGACCGATCCCGACCCACGCCCCGACACGCCCGCCGCGCAGCCCAATCGCGTGCGCAGCTTCCTGTTCGAGCAG CTCGACATCCGCGGCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MADADDAALAPILTKLAAARTRLIMERPFLGALVMHLPLKVGGEWCTTTGTDAQAFYFNPKFIDNLNLAQTQFVLAHEAM HCAMGHTHRRQHRVKRRWDVACDHAVNLILIEEGLKPPLHGILADQNFMTLSAEEIYPLIPEDTPEESFDQHIFDDDNEA GASPDDSQRQDNPDAGDAGGQGKEGQSEAEQTQGSGSQPSQKPNELSPSEREELAEQWKNRLAAAAQAARQAGKLSQSMM RWVDGMLAPNLPWRALLARFFAVNQRDDYSWRRPSRREGDALLPRLSSEGLDVVAAIDTSGSISDEELREFVSELDALKG QVRAKVTLLACDNHVADAAPWEFEPWDTMQLPVEIAGGGGTDFRPVFDWVENENRNPAMLVYFTDAEGDFPALPPNYPVI WLVKGKGAVPWGERVQLN
Sequences:
>Translated_418_residues MADADDAALAPILTKLAAARTRLIMERPFLGALVMHLPLKVGGEWCTTTGTDAQAFYFNPKFIDNLNLAQTQFVLAHEAM HCAMGHTHRRQHRVKRRWDVACDHAVNLILIEEGLKPPLHGILADQNFMTLSAEEIYPLIPEDTPEESFDQHIFDDDNEA GASPDDSQRQDNPDAGDAGGQGKEGQSEAEQTQGSGSQPSQKPNELSPSEREELAEQWKNRLAAAAQAARQAGKLSQSMM RWVDGMLAPNLPWRALLARFFAVNQRDDYSWRRPSRREGDALLPRLSSEGLDVVAAIDTSGSISDEELREFVSELDALKG QVRAKVTLLACDNHVADAAPWEFEPWDTMQLPVEIAGGGGTDFRPVFDWVENENRNPAMLVYFTDAEGDFPALPPNYPVI WLVKGKGAVPWGERVQLN >Mature_417_residues ADADDAALAPILTKLAAARTRLIMERPFLGALVMHLPLKVGGEWCTTTGTDAQAFYFNPKFIDNLNLAQTQFVLAHEAMH CAMGHTHRRQHRVKRRWDVACDHAVNLILIEEGLKPPLHGILADQNFMTLSAEEIYPLIPEDTPEESFDQHIFDDDNEAG ASPDDSQRQDNPDAGDAGGQGKEGQSEAEQTQGSGSQPSQKPNELSPSEREELAEQWKNRLAAAAQAARQAGKLSQSMMR WVDGMLAPNLPWRALLARFFAVNQRDDYSWRRPSRREGDALLPRLSSEGLDVVAAIDTSGSISDEELREFVSELDALKGQ VRAKVTLLACDNHVADAAPWEFEPWDTMQLPVEIAGGGGTDFRPVFDWVENENRNPAMLVYFTDAEGDFPALPPNYPVIW LVKGKGAVPWGERVQLN
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 46345; Mature: 46214
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADDAALAPILTKLAAARTRLIMERPFLGALVMHLPLKVGGEWCTTTGTDAQAFYFNP CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCCCCCEEEEECC KFIDNLNLAQTQFVLAHEAMHCAMGHTHRRQHRVKRRWDVACDHAVNLILIEEGLKPPLH HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHH GILADQNFMTLSAEEIYPLIPEDTPEESFDQHIFDDDNEAGASPDDSQRQDNPDAGDAGG HHCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGKEGQSEAEQTQGSGSQPSQKPNELSPSEREELAEQWKNRLAAAAQAARQAGKLSQSMM CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWVDGMLAPNLPWRALLARFFAVNQRDDYSWRRPSRREGDALLPRLSSEGLDVVAAIDTS HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCC GSISDEELREFVSELDALKGQVRAKVTLLACDNHVADAAPWEFEPWDTMQLPVEIAGGGG CCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCC TDFRPVFDWVENENRNPAMLVYFTDAEGDFPALPPNYPVIWLVKGKGAVPWGERVQLN CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECC >Mature Secondary Structure ADADDAALAPILTKLAAARTRLIMERPFLGALVMHLPLKVGGEWCTTTGTDAQAFYFNP CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCCCCCEEEEECC KFIDNLNLAQTQFVLAHEAMHCAMGHTHRRQHRVKRRWDVACDHAVNLILIEEGLKPPLH HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHH GILADQNFMTLSAEEIYPLIPEDTPEESFDQHIFDDDNEAGASPDDSQRQDNPDAGDAGG HHCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGKEGQSEAEQTQGSGSQPSQKPNELSPSEREELAEQWKNRLAAAAQAARQAGKLSQSMM CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWVDGMLAPNLPWRALLARFFAVNQRDDYSWRRPSRREGDALLPRLSSEGLDVVAAIDTS HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCC GSISDEELREFVSELDALKGQVRAKVTLLACDNHVADAAPWEFEPWDTMQLPVEIAGGGG CCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCC TDFRPVFDWVENENRNPAMLVYFTDAEGDFPALPPNYPVIWLVKGKGAVPWGERVQLN CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]