| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316755
Identifier: 74316755
GI number: 74316755
Start: 779857
End: 780969
Strand: Direct
Name: 74316755
Synonym: Tbd_0737
Alternate gene names: NA
Gene position: 779857-780969 (Clockwise)
Preceding gene: 74316754
Following gene: 74316757
Centisome position: 26.8
GC content: 74.48
Gene sequence:
>1113_bases GTGGCGTGCGGGCCTTACGCCGGCGTGCGCCGCATCGTCGTGCTGCGGCCCTGCGCGCTGGGCGATCTGATGTTCGCGTT GCCGGCGCTCGGCGCCCTGCGGGAAACCTATTCCGACGCGTCGATCACCCTGCTCGGCTTGCCGTGGCAGGCGGATTTTC TCGCCGGCCGGCCCGGCGCGATCGACGAAGTCCGCGTCGTGCCGACGATTCCGGGCGTCGGCGCGCCGCCCGACGCGGCC GAGGACGGCGCTGCCGTCGCAGCCTTGCTGGCCGGATTGAACGAGGGCGAACACGGCGGCGTCGATCTCGCGATCCAGCT CTACGGCGGCGGGCGCTATTCCAATCCCTTCCTGCAGCGCATCGGCGCGCGCCATACGATCGGCATGCGCGCGCCGGACG CGCCGCCGCTCGAGCGCACGCTGCGCTACGTCTATCTGCAGAACGAGCGCCTGCGCCTGCTCGAGGTCGTCGGCCTTGCC GGTGCGCGAACCGCCGCGCTCGAGCCGCGCCTCGCGGTGCTGCCGCGCGACCGCGCCGAGGCCGCGGCCTGGCTCGGCGC CGACGACGGCGCGCCGTGGGTCGTCGTCCAGCCGGGGGCGACCGACCCGCGGCGGCGCTGGCGACCCGAGCGTTTCGCCG CGGTGGCCGATGCGCTCGCCGCGGCCGGTGCGCGCATCGCGGTCAACGGCGGCCCCGACGAGCGCGCGGTCGGGGCCGCG GTGATCGCTGCGATGCGTTACCCCGCGGTCGATCTCGCCGCCGCCGGCCTCTCGCGCTCGGGGCTCGTCGGCGCGATCGC GCGTGCCGCGCTCGTGCTGTCGAACGACACCGGTCCGCTGCATCTCGCGCAGGCGGTCGGCACGGCAAGCGTCGGCATCT ACTGGTTCAGCAACCTGCTGATCTCGGGTCCGCTCTTCACCGGCCGCCATCGTCACGCGGTCGCGCTCGACCCCCGCTGC CCGGTGTGCGGGCAGGACAACGTCGGCGCGCGCTGCGCACACGACGTGAGCTTCGTCGACGCCGTATCGGTCGACGCGGT GCGCGATCAGGCGCTCGCGCTGCTCGCCGAGGTGCTGACGAGCAGGTCGAGCGCCTCGTCGAGCACGGCCTGA
Upstream 100 bases:
>100_bases CCCGCGCTCTATTCGCGGGCGCACGCCGGCGCCCGCGGCACCAAGGCCGCGGCCGGGCAGTGAGGGCGGCGCAGGCGCGT CGGCGGCCGGGCTGAGCGCC
Downstream 100 bases:
>100_bases GCGCGGATTCCGAGCGGGTCCCAGACGGCACGGTGGCACGACGGGTCGAGCGGCGCCCAGCGGCTCATCTCGGAAGCCCG GAAGATCACGACGCTCGGCA
Product: glycosyl transferase ADP-heptose:LPS heptosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase; Glycosyl Transferase; Heptosyltransferase Family Protein; Transferase; ADP-Heptose-LPS Heptosyltransferase; Heptosyltransferase
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MACGPYAGVRRIVVLRPCALGDLMFALPALGALRETYSDASITLLGLPWQADFLAGRPGAIDEVRVVPTIPGVGAPPDAA EDGAAVAALLAGLNEGEHGGVDLAIQLYGGGRYSNPFLQRIGARHTIGMRAPDAPPLERTLRYVYLQNERLRLLEVVGLA GARTAALEPRLAVLPRDRAEAAAWLGADDGAPWVVVQPGATDPRRRWRPERFAAVADALAAAGARIAVNGGPDERAVGAA VIAAMRYPAVDLAAAGLSRSGLVGAIARAALVLSNDTGPLHLAQAVGTASVGIYWFSNLLISGPLFTGRHRHAVALDPRC PVCGQDNVGARCAHDVSFVDAVSVDAVRDQALALLAEVLTSRSSASSSTA
Sequences:
>Translated_370_residues MACGPYAGVRRIVVLRPCALGDLMFALPALGALRETYSDASITLLGLPWQADFLAGRPGAIDEVRVVPTIPGVGAPPDAA EDGAAVAALLAGLNEGEHGGVDLAIQLYGGGRYSNPFLQRIGARHTIGMRAPDAPPLERTLRYVYLQNERLRLLEVVGLA GARTAALEPRLAVLPRDRAEAAAWLGADDGAPWVVVQPGATDPRRRWRPERFAAVADALAAAGARIAVNGGPDERAVGAA VIAAMRYPAVDLAAAGLSRSGLVGAIARAALVLSNDTGPLHLAQAVGTASVGIYWFSNLLISGPLFTGRHRHAVALDPRC PVCGQDNVGARCAHDVSFVDAVSVDAVRDQALALLAEVLTSRSSASSSTA >Mature_369_residues ACGPYAGVRRIVVLRPCALGDLMFALPALGALRETYSDASITLLGLPWQADFLAGRPGAIDEVRVVPTIPGVGAPPDAAE DGAAVAALLAGLNEGEHGGVDLAIQLYGGGRYSNPFLQRIGARHTIGMRAPDAPPLERTLRYVYLQNERLRLLEVVGLAG ARTAALEPRLAVLPRDRAEAAAWLGADDGAPWVVVQPGATDPRRRWRPERFAAVADALAAAGARIAVNGGPDERAVGAAV IAAMRYPAVDLAAAGLSRSGLVGAIARAALVLSNDTGPLHLAQAVGTASVGIYWFSNLLISGPLFTGRHRHAVALDPRCP VCGQDNVGARCAHDVSFVDAVSVDAVRDQALALLAEVLTSRSSASSSTA
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38352; Mature: 38221
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGPYAGVRRIVVLRPCALGDLMFALPALGALRETYSDASITLLGLPWQADFLAGRPGA CCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCC IDEVRVVPTIPGVGAPPDAAEDGAAVAALLAGLNEGEHGGVDLAIQLYGGGRYSNPFLQR CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHH IGARHTIGMRAPDAPPLERTLRYVYLQNERLRLLEVVGLAGARTAALEPRLAVLPRDRAE CCCCCCCCCCCCCCCCHHHHEEEEEECCCCEEEHHHHHCCCCCHHHCCCCEEECCCCHHH AAAWLGADDGAPWVVVQPGATDPRRRWRPERFAAVADALAAAGARIAVNGGPDERAVGAA HHEEECCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH VIAAMRYPAVDLAAAGLSRSGLVGAIARAALVLSNDTGPLHLAQAVGTASVGIYWFSNLL HHHHHHCCCHHHHHHCCCCCCHHHHHHHHEEEEECCCCCCHHHHHHCCHHHHHHHHHHHH ISGPLFTGRHRHAVALDPRCPVCGQDNVGARCAHDVSFVDAVSVDAVRDQALALLAEVLT HCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SRSSASSSTA CCCCCCCCCC >Mature Secondary Structure ACGPYAGVRRIVVLRPCALGDLMFALPALGALRETYSDASITLLGLPWQADFLAGRPGA CCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCC IDEVRVVPTIPGVGAPPDAAEDGAAVAALLAGLNEGEHGGVDLAIQLYGGGRYSNPFLQR CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHH IGARHTIGMRAPDAPPLERTLRYVYLQNERLRLLEVVGLAGARTAALEPRLAVLPRDRAE CCCCCCCCCCCCCCCCHHHHEEEEEECCCCEEEHHHHHCCCCCHHHCCCCEEECCCCHHH AAAWLGADDGAPWVVVQPGATDPRRRWRPERFAAVADALAAAGARIAVNGGPDERAVGAA HHEEECCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH VIAAMRYPAVDLAAAGLSRSGLVGAIARAALVLSNDTGPLHLAQAVGTASVGIYWFSNLL HHHHHHCCCHHHHHHCCCCCCHHHHHHHHEEEEECCCCCCHHHHHHCCHHHHHHHHHHHH ISGPLFTGRHRHAVALDPRCPVCGQDNVGARCAHDVSFVDAVSVDAVRDQALALLAEVLT HCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SRSSASSSTA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA