Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is rhbC [H]

Identifier: 74316736

GI number: 74316736

Start: 757508

End: 759349

Strand: Reverse

Name: rhbC [H]

Synonym: Tbd_0718

Alternate gene names: 74316736

Gene position: 759349-757508 (Counterclockwise)

Preceding gene: 74316737

Following gene: 74316735

Centisome position: 26.1

GC content: 69.11

Gene sequence:

>1842_bases
ATGCACTCACACCATCTCGCAAGTGCGATCGACGCCGCGACGCTGGCGCAGCAGGAAGCCGGCCGCCGCAGCATGGAAAC
GCTGCTCAACTGCTATTGCCGCGAGGTCGCGGCGCCCGAGGGCCAGCTCAGCGTCGGTCCGCTGTTCGGCCAGAGCGACA
GCCCGGCAGCGGTACACCTCGCCCTGCGCGGCAGCGGCGGACGCGCGCTGCATCTGCGCCTGCCGCTGACCGGCGAGCGC
GTGCTGACCGTGGTCGACGACGCCTGCGCCACCGGCAACTACCGCTACCGCTCGCCGATGTATTGCAAGGCACCCGGCCG
TCCCTGGGCGCTGCTCGACTGGCAGGCGCTCGCCGGCCGCCTGCTGCGCGAGCTCGCGCTCAAACACGAACAGCCGGCGA
ACGACGAGCTCATGCAGCAGATCGCCGACAGCGTCGCCGTCACCGCGAGCGTGCTGAACCACGCGCGCCGGGAGCGGTTT
TCGTCCGAGCCGCTGCAGGCCTTCGTCGAATCCGAGCAGTCGCTGATGTTCGGCCACCCCTTCCACCCCGCACCGAAAAG
CCGGCAGGGCCTGTCGGGCGAGGACATGCGGCGCTATTCGCCGGAAACGGGGGCGCGCTTCGCGCTGCATTATTTCGCCG
TGCGCCGCGAACATCTGCTGCAGCAGTCGGTGCTCGCCGAGCCCTGCGACCGCGTCGTCGCGGCGCACGCGCCGGACGGA
ATCGCCGCCGACGACGACTTCTTTCTCCTGCCGGTCCATCCCTGGCAGGCGCGCCATCTGCTCGACCAGCCCGCCGTGGC
GACGGCGCTCGCGGGCGACCGCATGCGCGACCTCGGCCCGCAGGGCGCGGATTTCTACCCGACCTCGTCGATCCGCACGC
TGTTCCATCCCGACACCCCCTATTTCTACAAGTGCTCGCTCAACGTGCGCATCACCAACTGCGTGCGCAAGAACGCGATC
TACGAGCTCGAAGGGGCGCTGCAGGTCACGCGCGTCCTGCGCGGTCTCGGGCCGCAGCTGCGTGCGCGCTTCCCGAACCT
CGCGGTCATGGAGGAGCCGGCCTTCCTCTCGGCCGACATGAAGACCGGCGACGCCCGCGCCGACAAAATGATCACCGAAG
GCTTCGGCCTGATCCTGCGACATGGCTTCGCCGGCCTGCTGCAGCCCGGCGTCACGCCGCTGCTGGCCGGCGCGCTGTTC
GGCAACCACGTCTACGGCGAAGCACGGCTCGCCGAACTGCTCGACGCGCTGCCGCGCCACGCAGGCACCTCGCGCGAGGA
CGCTGCCGAGTCCTGGTTCTCGCGCTACGTCGGCGAACTCATGCACCCGGTGCTGTACTGCTATTTCGCGCACGGCGTGA
TCTTCGAGCCGCACCTGCAGAACGTCGTGATCGGCGTCGCCGCCGGCGAGGTGCGTCAGGTCTTCCTGCGCGACTTCGAA
GGCGTGAAGCTGGTGCAGGAACGCTTCGGCGCCGAGCGATTGGACGCGATCAGCGCGCGTGCCCGCGAAGCGCTCTGGTA
TGACGCCGAGCAGGGCTGGAAGCGCATCGCCTATTGCCTCTTCGTCAACAACTTCTGCGAGGCGATCAGCCAGATCGGCG
CCGGCAATGCGGCACTGCAGCGTCGCCTGTGGGCGGTCGTGCGCGACCATCTGCACCGCTATCAGAACCAGCATGGCGAC
GACGCGTCGGCACGCCGCATCAACGCGCTGCTCGCCGGCGAAGCCTTTCCGGGCAAGGCCAATCTGATCAACCGCTTCTT
CAAGCGCGCCGACCGCGCCTCCGGCTACCTGCCGGTCAACAACCCCCTCGGCACGCTCGCGGAGCGCCGCGCATGGAACT
GA

Upstream 100 bases:

>100_bases
GCGCGCCGTTCTTCATCGGCGCCGCCGTCCTGCTCGCCGCCGGCGCCTATCTCGGCGCCGTGGCGGCTCAACCGAGAAAC
CCTTGACCCGAGGAGACAGC

Downstream 100 bases:

>100_bases
GGCTCGCCGAGGTGTTCGCCCACCTGCGCGAAGCCGAAGCCGAGGCCGGCGCGCCCCTGTGCGCCTACCTCTACGACCTC
GCCGCGCTCGACGCACACGC

Product: iron transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MHSHHLASAIDAATLAQQEAGRRSMETLLNCYCREVAAPEGQLSVGPLFGQSDSPAAVHLALRGSGGRALHLRLPLTGER
VLTVVDDACATGNYRYRSPMYCKAPGRPWALLDWQALAGRLLRELALKHEQPANDELMQQIADSVAVTASVLNHARRERF
SSEPLQAFVESEQSLMFGHPFHPAPKSRQGLSGEDMRRYSPETGARFALHYFAVRREHLLQQSVLAEPCDRVVAAHAPDG
IAADDDFFLLPVHPWQARHLLDQPAVATALAGDRMRDLGPQGADFYPTSSIRTLFHPDTPYFYKCSLNVRITNCVRKNAI
YELEGALQVTRVLRGLGPQLRARFPNLAVMEEPAFLSADMKTGDARADKMITEGFGLILRHGFAGLLQPGVTPLLAGALF
GNHVYGEARLAELLDALPRHAGTSREDAAESWFSRYVGELMHPVLYCYFAHGVIFEPHLQNVVIGVAAGEVRQVFLRDFE
GVKLVQERFGAERLDAISARAREALWYDAEQGWKRIAYCLFVNNFCEAISQIGAGNAALQRRLWAVVRDHLHRYQNQHGD
DASARRINALLAGEAFPGKANLINRFFKRADRASGYLPVNNPLGTLAERRAWN

Sequences:

>Translated_613_residues
MHSHHLASAIDAATLAQQEAGRRSMETLLNCYCREVAAPEGQLSVGPLFGQSDSPAAVHLALRGSGGRALHLRLPLTGER
VLTVVDDACATGNYRYRSPMYCKAPGRPWALLDWQALAGRLLRELALKHEQPANDELMQQIADSVAVTASVLNHARRERF
SSEPLQAFVESEQSLMFGHPFHPAPKSRQGLSGEDMRRYSPETGARFALHYFAVRREHLLQQSVLAEPCDRVVAAHAPDG
IAADDDFFLLPVHPWQARHLLDQPAVATALAGDRMRDLGPQGADFYPTSSIRTLFHPDTPYFYKCSLNVRITNCVRKNAI
YELEGALQVTRVLRGLGPQLRARFPNLAVMEEPAFLSADMKTGDARADKMITEGFGLILRHGFAGLLQPGVTPLLAGALF
GNHVYGEARLAELLDALPRHAGTSREDAAESWFSRYVGELMHPVLYCYFAHGVIFEPHLQNVVIGVAAGEVRQVFLRDFE
GVKLVQERFGAERLDAISARAREALWYDAEQGWKRIAYCLFVNNFCEAISQIGAGNAALQRRLWAVVRDHLHRYQNQHGD
DASARRINALLAGEAFPGKANLINRFFKRADRASGYLPVNNPLGTLAERRAWN
>Mature_613_residues
MHSHHLASAIDAATLAQQEAGRRSMETLLNCYCREVAAPEGQLSVGPLFGQSDSPAAVHLALRGSGGRALHLRLPLTGER
VLTVVDDACATGNYRYRSPMYCKAPGRPWALLDWQALAGRLLRELALKHEQPANDELMQQIADSVAVTASVLNHARRERF
SSEPLQAFVESEQSLMFGHPFHPAPKSRQGLSGEDMRRYSPETGARFALHYFAVRREHLLQQSVLAEPCDRVVAAHAPDG
IAADDDFFLLPVHPWQARHLLDQPAVATALAGDRMRDLGPQGADFYPTSSIRTLFHPDTPYFYKCSLNVRITNCVRKNAI
YELEGALQVTRVLRGLGPQLRARFPNLAVMEEPAFLSADMKTGDARADKMITEGFGLILRHGFAGLLQPGVTPLLAGALF
GNHVYGEARLAELLDALPRHAGTSREDAAESWFSRYVGELMHPVLYCYFAHGVIFEPHLQNVVIGVAAGEVRQVFLRDFE
GVKLVQERFGAERLDAISARAREALWYDAEQGWKRIAYCLFVNNFCEAISQIGAGNAALQRRLWAVVRDHLHRYQNQHGD
DASARRINALLAGEAFPGKANLINRFFKRADRASGYLPVNNPLGTLAERRAWN

Specific function: Unknown

COG id: COG4264

COG function: function code Q; Siderophore synthetase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007310
- InterPro:   IPR022770 [H]

Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]

EC number: NA

Molecular weight: Translated: 68031; Mature: 68031

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHHLASAIDAATLAQQEAGRRSMETLLNCYCREVAAPEGQLSVGPLFGQSDSPAAVHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEE
ALRGSGGRALHLRLPLTGERVLTVVDDACATGNYRYRSPMYCKAPGRPWALLDWQALAGR
EEECCCCCEEEEECCCCCCHHEEEHHHHHCCCCCCCCCCEEECCCCCCEEEECHHHHHHH
LLRELALKHEQPANDELMQQIADSVAVTASVLNHARRERFSSEPLQAFVESEQSLMFGHP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCC
FHPAPKSRQGLSGEDMRRYSPETGARFALHYFAVRREHLLQQSVLAEPCDRVVAAHAPDG
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IAADDDFFLLPVHPWQARHLLDQPAVATALAGDRMRDLGPQGADFYPTSSIRTLFHPDTP
CCCCCCEEEEECCCHHHHHHHCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEECCCCC
YFYKCSLNVRITNCVRKNAIYELEGALQVTRVLRGLGPQLRARFPNLAVMEEPAFLSADM
EEEEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCEECCC
KTGDARADKMITEGFGLILRHGFAGLLQPGVTPLLAGALFGNHVYGEARLAELLDALPRH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
AGTSREDAAESWFSRYVGELMHPVLYCYFAHGVIFEPHLQNVVIGVAAGEVRQVFLRDFE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHEEEEECHHHHHHHHHHCCC
GVKLVQERFGAERLDAISARAREALWYDAEQGWKRIAYCLFVNNFCEAISQIGAGNAALQ
HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RRLWAVVRDHLHRYQNQHGDDASARRINALLAGEAFPGKANLINRFFKRADRASGYLPVN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
NPLGTLAERRAWN
CCHHHHHHHCCCC
>Mature Secondary Structure
MHSHHLASAIDAATLAQQEAGRRSMETLLNCYCREVAAPEGQLSVGPLFGQSDSPAAVHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEE
ALRGSGGRALHLRLPLTGERVLTVVDDACATGNYRYRSPMYCKAPGRPWALLDWQALAGR
EEECCCCCEEEEECCCCCCHHEEEHHHHHCCCCCCCCCCEEECCCCCCEEEECHHHHHHH
LLRELALKHEQPANDELMQQIADSVAVTASVLNHARRERFSSEPLQAFVESEQSLMFGHP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCC
FHPAPKSRQGLSGEDMRRYSPETGARFALHYFAVRREHLLQQSVLAEPCDRVVAAHAPDG
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IAADDDFFLLPVHPWQARHLLDQPAVATALAGDRMRDLGPQGADFYPTSSIRTLFHPDTP
CCCCCCEEEEECCCHHHHHHHCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEECCCCC
YFYKCSLNVRITNCVRKNAIYELEGALQVTRVLRGLGPQLRARFPNLAVMEEPAFLSADM
EEEEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCEECCC
KTGDARADKMITEGFGLILRHGFAGLLQPGVTPLLAGALFGNHVYGEARLAELLDALPRH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
AGTSREDAAESWFSRYVGELMHPVLYCYFAHGVIFEPHLQNVVIGVAAGEVRQVFLRDFE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHEEEEECHHHHHHHHHHCCC
GVKLVQERFGAERLDAISARAREALWYDAEQGWKRIAYCLFVNNFCEAISQIGAGNAALQ
HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RRLWAVVRDHLHRYQNQHGDDASARRINALLAGEAFPGKANLINRFFKRADRASGYLPVN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
NPLGTLAERRAWN
CCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]