| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316728
Identifier: 74316728
GI number: 74316728
Start: 748980
End: 749927
Strand: Reverse
Name: 74316728
Synonym: Tbd_0710
Alternate gene names: NA
Gene position: 749927-748980 (Counterclockwise)
Preceding gene: 74316729
Following gene: 74316727
Centisome position: 25.77
GC content: 65.08
Gene sequence:
>948_bases ATGAAATCACGTATCGCGATGCTCGCTTCGCTTCCTTTCGTCCTCGCATTGACCCCCTCCGTCGCCCAGGCCGACGAACA CCTGCTCGGCTACGTCAGCGGCGCCGAGACGCTGCCCCAGGGCGCGAACGACGCCTATCTGTTCGTGACGCGCCGCTGGG ACAAGGGACGCGGCGACTACACGGCTCACGACTACTCGCTCGAATACGAGCGCGGCCTGACCCATCGCCTGACCGGCGGC ATCGAGCTCAAGGGCCAGTCGATCGACACCAGCGGTCTGGTCATCGACGGCTACATGCCGGGCGCGGAGGAATACGGCAT CAAGGCGTCGGGCATCGAGGCCAAGCTCAAGTACGCCTTCCTGTCGGTGGCGAAGGATGAAGTCGGCCTATCGGGCACCT TCTCGCTCCAGCAAAGCTGGCTCGACCCGCATTCCGGCCGCGACAAGGACGTGACCAAGTTCGAGCTGGGCCTGCAGCTG CAGAAGCTGCTGGTCGACGACCAGCTCTCGCTCATGTTCAACACCGGCTTCGAGGGCACCTACGCCAAGCGCGCCGCCCT CGACGCCGCGACCCAGGCTGCCGCCGACGCCGAAATCCAGACGCTGACCGGCGACCCCGGCGCGAGCTTCGAATGGCCGA CCGATCCCGAAATGGAAATCGAGTTCAAGCTCGGCGCGGGCGCCGCGTACCGCATCGCGCCCAACTGGTACATCGGCGCC GAAACCCTGTACGAGACCGAGTTCGAAACCGAGGTCGGGCAGGAGCGCTGGTCGGTGTTCGCGGGACCGTCGATCCACTA CGGCAGCAAGCAGTGGTGGGCGACGCTGACCTGGTTCGAGCAGCTCGCGGGCGGCAAGGAGCAGTACATCAGCCAGGCCG ACGACGACCTGCACCTGATCGAAAAAACCAAGCACGAGCTGCGCCTGAAGCTCGGCTACAACTTCTGA
Upstream 100 bases:
>100_bases GTCACCGAACCGCGCACCACCTCCTGACGCCTCTCCACTCCGCCAGCCACTCCGCATGGAACAGCCAGCCAAGCCTTCAA CGCTCCTCTGGGAACTAACC
Downstream 100 bases:
>100_bases GGCCCGCCATGTCGATCCGGCCCGACTGGTTAATCGTTCCCGCCGTGTGCGCCCCGCTGTTGGCGGCGGCGCCGGCTTTC GCCGTGCAGTACATGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKSRIAMLASLPFVLALTPSVAQADEHLLGYVSGAETLPQGANDAYLFVTRRWDKGRGDYTAHDYSLEYERGLTHRLTGG IELKGQSIDTSGLVIDGYMPGAEEYGIKASGIEAKLKYAFLSVAKDEVGLSGTFSLQQSWLDPHSGRDKDVTKFELGLQL QKLLVDDQLSLMFNTGFEGTYAKRAALDAATQAAADAEIQTLTGDPGASFEWPTDPEMEIEFKLGAGAAYRIAPNWYIGA ETLYETEFETEVGQERWSVFAGPSIHYGSKQWWATLTWFEQLAGGKEQYISQADDDLHLIEKTKHELRLKLGYNF
Sequences:
>Translated_315_residues MKSRIAMLASLPFVLALTPSVAQADEHLLGYVSGAETLPQGANDAYLFVTRRWDKGRGDYTAHDYSLEYERGLTHRLTGG IELKGQSIDTSGLVIDGYMPGAEEYGIKASGIEAKLKYAFLSVAKDEVGLSGTFSLQQSWLDPHSGRDKDVTKFELGLQL QKLLVDDQLSLMFNTGFEGTYAKRAALDAATQAAADAEIQTLTGDPGASFEWPTDPEMEIEFKLGAGAAYRIAPNWYIGA ETLYETEFETEVGQERWSVFAGPSIHYGSKQWWATLTWFEQLAGGKEQYISQADDDLHLIEKTKHELRLKLGYNF >Mature_315_residues MKSRIAMLASLPFVLALTPSVAQADEHLLGYVSGAETLPQGANDAYLFVTRRWDKGRGDYTAHDYSLEYERGLTHRLTGG IELKGQSIDTSGLVIDGYMPGAEEYGIKASGIEAKLKYAFLSVAKDEVGLSGTFSLQQSWLDPHSGRDKDVTKFELGLQL QKLLVDDQLSLMFNTGFEGTYAKRAALDAATQAAADAEIQTLTGDPGASFEWPTDPEMEIEFKLGAGAAYRIAPNWYIGA ETLYETEFETEVGQERWSVFAGPSIHYGSKQWWATLTWFEQLAGGKEQYISQADDDLHLIEKTKHELRLKLGYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34917; Mature: 34917
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRIAMLASLPFVLALTPSVAQADEHLLGYVSGAETLPQGANDAYLFVTRRWDKGRGDY CCCHHHHHHHCCEEEEECCCHHHHHHHHEEEECCHHHCCCCCCCEEEEEEEECCCCCCCC TAHDYSLEYERGLTHRLTGGIELKGQSIDTSGLVIDGYMPGAEEYGIKASGIEAKLKYAF EEECEEEHHHCCCCEEECCCEEEECCEECCCCEEEECCCCCHHHCCEEECCCHHHHHHHH LSVAKDEVGLSGTFSLQQSWLDPHSGRDKDVTKFELGLQLQKLLVDDQLSLMFNTGFEGT HHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCC YAKRAALDAATQAAADAEIQTLTGDPGASFEWPTDPEMEIEFKLGAGAAYRIAPNWYIGA HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEECC ETLYETEFETEVGQERWSVFAGPSIHYGSKQWWATLTWFEQLAGGKEQYISQADDDLHLI HHEECCHHHHHHHHHHHEEEECCEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHH EKTKHELRLKLGYNF HHCCCEEEEEECCCC >Mature Secondary Structure MKSRIAMLASLPFVLALTPSVAQADEHLLGYVSGAETLPQGANDAYLFVTRRWDKGRGDY CCCHHHHHHHCCEEEEECCCHHHHHHHHEEEECCHHHCCCCCCCEEEEEEEECCCCCCCC TAHDYSLEYERGLTHRLTGGIELKGQSIDTSGLVIDGYMPGAEEYGIKASGIEAKLKYAF EEECEEEHHHCCCCEEECCCEEEECCEECCCCEEEECCCCCHHHCCEEECCCHHHHHHHH LSVAKDEVGLSGTFSLQQSWLDPHSGRDKDVTKFELGLQLQKLLVDDQLSLMFNTGFEGT HHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCC YAKRAALDAATQAAADAEIQTLTGDPGASFEWPTDPEMEIEFKLGAGAAYRIAPNWYIGA HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEECC ETLYETEFETEVGQERWSVFAGPSIHYGSKQWWATLTWFEQLAGGKEQYISQADDDLHLI HHEECCHHHHHHHHHHHEEEECCEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHH EKTKHELRLKLGYNF HHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA