| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316682
Identifier: 74316682
GI number: 74316682
Start: 704678
End: 705328
Strand: Reverse
Name: 74316682
Synonym: Tbd_0664
Alternate gene names: NA
Gene position: 705328-704678 (Counterclockwise)
Preceding gene: 74316683
Following gene: 74316681
Centisome position: 24.24
GC content: 67.13
Gene sequence:
>651_bases ATGGTCTCGACCCTGCACGCCGCGGGTGTCGGAACCCAAGAAAACCGAACGAGGAGACGATTCATGACCTATACCCGACT GCCCGCCCGCAGCCTCGACCAGAACGCCGGCCTGCTGCGCCCGGCCTGCATCCTTCCCGAGCGTGTCGGGCTCGAAAATC CGGCCCTCGACGTGATGACCGATTTCCGCCGCCTGACCGCCTTCATCGCGACGCCCGGCGACACGATTACCCAGGCCGAA GAGCGGATGATCCGCCGCAAGGTGCGCCTGCTCTTCGTGATGGACACGCTCGACCGCGTCGCCGGGCTCATCACGAGCAC CGACATCCAGGGCGAGAAGCCGCTGAAGATCGTGCAAAGCCGCGGCATCCGCCGGGACGAAGTGCTCGTCGCCGACATCA TGACCCCGGTCGACCGGCTCGAGGCGGTCGACTTCGACGACATCGCCCACGCACGCGTCGGCCATGTGCTCGAGACGCTC AAGGCCCGCGGGCGCCAGCACGCGCTCGTGATCGAGCACACCGAGGGCCGGCAGATGGTGCGCGGCCTGCTCTCGCTGTC GCAGCTGTGCAAGCAGCTCGGCGTGACCGTCGAGACGACCGAAGTCGCCGACACCTTCCTCGAAATCGAGCAGCAGCTCG CCCACGTCTGA
Upstream 100 bases:
>100_bases AGCGATTCGCTTTAGGCCCGGCATGACCTGATATCCAACAAGAACTATTTATGTTGCGAAAAAAAAACTTGAATGGACAG GTCCCGGGACGAGGAACACG
Downstream 100 bases:
>100_bases GCCGGTCGCGGCGGCGCGTCGCATGGAAATCCTTCTCGACGAGCTCGCTGCGGGATTTCCCGACGCGTCGCAGATCGTCC GCCTGCTTGCGCGGCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain Containing Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; CBS Domain Protein; CBS Domain Containing Membrane Protein; Signal Transduction Protein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MVSTLHAAGVGTQENRTRRRFMTYTRLPARSLDQNAGLLRPACILPERVGLENPALDVMTDFRRLTAFIATPGDTITQAE ERMIRRKVRLLFVMDTLDRVAGLITSTDIQGEKPLKIVQSRGIRRDEVLVADIMTPVDRLEAVDFDDIAHARVGHVLETL KARGRQHALVIEHTEGRQMVRGLLSLSQLCKQLGVTVETTEVADTFLEIEQQLAHV
Sequences:
>Translated_216_residues MVSTLHAAGVGTQENRTRRRFMTYTRLPARSLDQNAGLLRPACILPERVGLENPALDVMTDFRRLTAFIATPGDTITQAE ERMIRRKVRLLFVMDTLDRVAGLITSTDIQGEKPLKIVQSRGIRRDEVLVADIMTPVDRLEAVDFDDIAHARVGHVLETL KARGRQHALVIEHTEGRQMVRGLLSLSQLCKQLGVTVETTEVADTFLEIEQQLAHV >Mature_216_residues MVSTLHAAGVGTQENRTRRRFMTYTRLPARSLDQNAGLLRPACILPERVGLENPALDVMTDFRRLTAFIATPGDTITQAE ERMIRRKVRLLFVMDTLDRVAGLITSTDIQGEKPLKIVQSRGIRRDEVLVADIMTPVDRLEAVDFDDIAHARVGHVLETL KARGRQHALVIEHTEGRQMVRGLLSLSQLCKQLGVTVETTEVADTFLEIEQQLAHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24229; Mature: 24229
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTLHAAGVGTQENRTRRRFMTYTRLPARSLDQNAGLLRPACILPERVGLENPALDVMT CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCHHHCCCCCCHHHHHH DFRRLTAFIATPGDTITQAEERMIRRKVRLLFVMDTLDRVAGLITSTDIQGEKPLKIVQS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RGIRRDEVLVADIMTPVDRLEAVDFDDIAHARVGHVLETLKARGRQHALVIEHTEGRQMV CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH RGLLSLSQLCKQLGVTVETTEVADTFLEIEQQLAHV HHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSTLHAAGVGTQENRTRRRFMTYTRLPARSLDQNAGLLRPACILPERVGLENPALDVMT CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCHHHCCCCCCHHHHHH DFRRLTAFIATPGDTITQAEERMIRRKVRLLFVMDTLDRVAGLITSTDIQGEKPLKIVQS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RGIRRDEVLVADIMTPVDRLEAVDFDDIAHARVGHVLETLKARGRQHALVIEHTEGRQMV CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH RGLLSLSQLCKQLGVTVETTEVADTFLEIEQQLAHV HHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA