| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is zipA [C]
Identifier: 74316641
GI number: 74316641
Start: 654770
End: 655939
Strand: Direct
Name: zipA [C]
Synonym: Tbd_0623
Alternate gene names: 74316641
Gene position: 654770-655939 (Clockwise)
Preceding gene: 74316640
Following gene: 74316642
Centisome position: 22.5
GC content: 69.32
Gene sequence:
>1170_bases ATGAGTGATCTGCAAATCGGCTTGTTGGTGATCGGTGCCGCCGTCGTCATCGGCGTGCTGCTGTTCAACTGGCTGCAGGA ACGCCGCTTCCGCAAGCAGATCGGCGCCGCTTTCCAGGCGCCGGTCGCCGACCCTCTGATGCAGCCGGCCGCCGCGCCGC ACGAGTCCCAGGAGCGAATCGAGCCCGCGCTACGTGAGCCGGTCTTCGACGCCGCCGAGGAGGCCGTCGTGGTTCACATT CAGCGCCCGGTCGAACCCTCCGCGGCCGCCGCGCTGCATCCGGATCGTGCCGAGGCCGCCTTCCGCGACGTCACGGCGAC GGCCGCGCCGTCGCCGGTGACCCACGCTGCCCCCGCGCCGTACGACGAACTGATCGAATACCGGGTCCGCGTTGCGGCGG ACGGTGTCGCCGCGGCTGCCTTCGTCGACGCATTCAACAAGACGCGCACGCTCGGCAAGCCCGTGCGCTGGCTGGGCCTG CCGACCGGCGCGGCGGCGTGGGAAGACATGCAGCCCTGGCGTGACGTGCGCTACCAGGAGATCGTCGTCACGCTCCAGCT CGCCGACCGCAACGGCGCCGCGCAGGAAGACCAGTTGCTCGCGCTGTGCGAGCTCGTCAAGGCCGCGGCGCAGAGCCACA ATCTGCGCGTCGCCTGCGACGACCTCGGCGAGGCGCTCGAGCGTGCGCAGGCGATCGACCGTTTCTGCGTCGATGTCGAC GTCCTGATCGGTCTGAACGTCGTCGCGCGCGGCGAGGGCGCCGTCAACCTCGCCCGCATCGTGCGGCAGGCCGAGTCGAG TGGGATGGTGCTCGGCGAGGATGGCGTGTTCCAGTTGCTCGACAGTCGCGGCGAGCCACTCTACGCGCTGTGCAATCACG ACGCCGAACCCTTCGGCGGCGAGCCCGTCGAGGGGCGCAATTCGCAGGGCGTCACCTTGCAATTCGACGTCCCGCGCGTG CCCGACGGCCTCAAGGTCTTCGACGGCATGGTCGCCTTCGGCCGCAGGCTCGCCAACGAGGTCGGCGGTGTTCTCGTCGA CGACAACCTGCGTCCGCTGACCGACAGCGGTATCGAAAAAATCCGCAGCCAGCTCACCGAGATTTACGCGCGCATGGAGG CGCGCGGCGTCCCTTCCGGGTCCCGGCGTTCGCTGCGTCTGTTCTCCTGA
Upstream 100 bases:
>100_bases GCGGTCGAGGAACGCGCGCGCAGCGAGCTCGGCATGATCGCGCCCGACGAATGGTTCGTTCGCATCGTGCCTACCCACTC CGTACGGTCGGGAAAAACGC
Downstream 100 bases:
>100_bases TGGCCGACCGCGATGTGCAGGCGCGCGCCGCCGCGCTGCGCCGCGAGATCGAGCGCCACAACTACGCCTACTATGTCCTC GACGCGCCGACCATTCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSDLQIGLLVIGAAVVIGVLLFNWLQERRFRKQIGAAFQAPVADPLMQPAAAPHESQERIEPALREPVFDAAEEAVVVHI QRPVEPSAAAALHPDRAEAAFRDVTATAAPSPVTHAAPAPYDELIEYRVRVAADGVAAAAFVDAFNKTRTLGKPVRWLGL PTGAAAWEDMQPWRDVRYQEIVVTLQLADRNGAAQEDQLLALCELVKAAAQSHNLRVACDDLGEALERAQAIDRFCVDVD VLIGLNVVARGEGAVNLARIVRQAESSGMVLGEDGVFQLLDSRGEPLYALCNHDAEPFGGEPVEGRNSQGVTLQFDVPRV PDGLKVFDGMVAFGRRLANEVGGVLVDDNLRPLTDSGIEKIRSQLTEIYARMEARGVPSGSRRSLRLFS
Sequences:
>Translated_389_residues MSDLQIGLLVIGAAVVIGVLLFNWLQERRFRKQIGAAFQAPVADPLMQPAAAPHESQERIEPALREPVFDAAEEAVVVHI QRPVEPSAAAALHPDRAEAAFRDVTATAAPSPVTHAAPAPYDELIEYRVRVAADGVAAAAFVDAFNKTRTLGKPVRWLGL PTGAAAWEDMQPWRDVRYQEIVVTLQLADRNGAAQEDQLLALCELVKAAAQSHNLRVACDDLGEALERAQAIDRFCVDVD VLIGLNVVARGEGAVNLARIVRQAESSGMVLGEDGVFQLLDSRGEPLYALCNHDAEPFGGEPVEGRNSQGVTLQFDVPRV PDGLKVFDGMVAFGRRLANEVGGVLVDDNLRPLTDSGIEKIRSQLTEIYARMEARGVPSGSRRSLRLFS >Mature_388_residues SDLQIGLLVIGAAVVIGVLLFNWLQERRFRKQIGAAFQAPVADPLMQPAAAPHESQERIEPALREPVFDAAEEAVVVHIQ RPVEPSAAAALHPDRAEAAFRDVTATAAPSPVTHAAPAPYDELIEYRVRVAADGVAAAAFVDAFNKTRTLGKPVRWLGLP TGAAAWEDMQPWRDVRYQEIVVTLQLADRNGAAQEDQLLALCELVKAAAQSHNLRVACDDLGEALERAQAIDRFCVDVDV LIGLNVVARGEGAVNLARIVRQAESSGMVLGEDGVFQLLDSRGEPLYALCNHDAEPFGGEPVEGRNSQGVTLQFDVPRVP DGLKVFDGMVAFGRRLANEVGGVLVDDNLRPLTDSGIEKIRSQLTEIYARMEARGVPSGSRRSLRLFS
Specific function: Interacts Directly With The Cell Division Protein Ftsz. Probable Receptor For The Septal Ring Structure, May Anchor It To The Inner-Membrane. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Type Ib Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42087; Mature: 41956
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLQIGLLVIGAAVVIGVLLFNWLQERRFRKQIGAAFQAPVADPLMQPAAAPHESQERI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCCCCCCCHHHHH EPALREPVFDAAEEAVVVHIQRPVEPSAAAALHPDRAEAAFRDVTATAAPSPVTHAAPAP HHHHHCHHHHCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC YDELIEYRVRVAADGVAAAAFVDAFNKTRTLGKPVRWLGLPTGAAAWEDMQPWRDVRYQE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHCCHHHHCCCEE IVVTLQLADRNGAAQEDQLLALCELVKAAAQSHNLRVACDDLGEALERAQAIDRFCVDVD EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH VLIGLNVVARGEGAVNLARIVRQAESSGMVLGEDGVFQLLDSRGEPLYALCNHDAEPFGG HHHCCEEEECCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEEEECCCCCCCCC EPVEGRNSQGVTLQFDVPRVPDGLKVFDGMVAFGRRLANEVGGVLVDDNLRPLTDSGIEK CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHH IRSQLTEIYARMEARGVPSGSRRSLRLFS HHHHHHHHHHHHHHCCCCCCCCCCEECCC >Mature Secondary Structure SDLQIGLLVIGAAVVIGVLLFNWLQERRFRKQIGAAFQAPVADPLMQPAAAPHESQERI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCCCCCCCHHHHH EPALREPVFDAAEEAVVVHIQRPVEPSAAAALHPDRAEAAFRDVTATAAPSPVTHAAPAP HHHHHCHHHHCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC YDELIEYRVRVAADGVAAAAFVDAFNKTRTLGKPVRWLGLPTGAAAWEDMQPWRDVRYQE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHCCHHHHCCCEE IVVTLQLADRNGAAQEDQLLALCELVKAAAQSHNLRVACDDLGEALERAQAIDRFCVDVD EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH VLIGLNVVARGEGAVNLARIVRQAESSGMVLGEDGVFQLLDSRGEPLYALCNHDAEPFGG HHHCCEEEECCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEEEECCCCCCCCC EPVEGRNSQGVTLQFDVPRVPDGLKVFDGMVAFGRRLANEVGGVLVDDNLRPLTDSGIEK CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHH IRSQLTEIYARMEARGVPSGSRRSLRLFS HHHHHHHHHHHHHHCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA