Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316545

Identifier: 74316545

GI number: 74316545

Start: 554151

End: 554699

Strand: Reverse

Name: 74316545

Synonym: Tbd_0527

Alternate gene names: NA

Gene position: 554699-554151 (Counterclockwise)

Preceding gene: 74316546

Following gene: 74316544

Centisome position: 19.06

GC content: 71.77

Gene sequence:

>549_bases
ATGACACGCTCGGTTATTGAGCTCCCCGTCACCGCCGACGACCGCAGGATCGCGCGGCTCGCGGCGGTGGCGATCGGCAT
CACGCTCGCCGAAGCGGCGATCCCGAGTCCGGTGCCCGGGATCAAGCCCGGCCTTGCCAACATCGTCGTGCTGCTCGTGC
TGCTGCAATACGGCTGGCGGACTGCGGCCTGGGTCTCGGCGATGCGCGTGCTGGCCGGCAGTCTGCTCCTGGGCAGTCTG
TTCGCGCCCGGCTTCTGGTTGTCCGCGGCGGGGGCGACGGTCAGCCTGCTCGTTCTCGGACTCGCGCGCCATCTGCCCGC
ACGCTATTTCGGACCGGTCAGCCTCTCGATACTTGCGGCTTTCGGACACATCGGAGGACAGCTCGCGCTCGCCGGCTGGT
GGCTCCTGCCGGGCGCGGCGCTGATCGGCCTCATCCCGGTATTCGCCGCCGCCGCGCTGATCTTCGGCACCGTAAACGGC
GTCGTCGTCGCGCGCCTGCGCGCAGCCCCCGACGCCGGCGGGCCGCCCGCCGCGGGCGCCGCGCAGTAG

Upstream 100 bases:

>100_bases
CAGCTCTGCGTCAAGCAAGGCTGGCTCTCGCTCTCGGGCCAGGCGGCGCTATGCCTGCCGAACCAGGTCAGCGTGGAGAT
CCGCGGCCGCAAGCCGGCCT

Downstream 100 bases:

>100_bases
ATTATTGACCGCATCCGGGCGACAATCCGCGCCATGCACACCGCCCCCAAGACCGTCACACTCGCGCTGTCCGGCGCCTC
GGGCATGGCCTACGGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWRTAAWVSAMRVLAGSLLLGSL
FAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAAFGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNG
VVVARLRAAPDAGGPPAAGAAQ

Sequences:

>Translated_182_residues
MTRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWRTAAWVSAMRVLAGSLLLGSL
FAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAAFGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNG
VVVARLRAAPDAGGPPAAGAAQ
>Mature_181_residues
TRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWRTAAWVSAMRVLAGSLLLGSLF
APGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAAFGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNGV
VVARLRAAPDAGGPPAAGAAQ

Specific function: Unknown

COG id: COG4769

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18407; Mature: 18276

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWR
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCH
TAAWVSAMRVLAGSLLLGSLFAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
FGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNGVVVARLRAAPDAGGPPAAGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AQ
CC
>Mature Secondary Structure 
TRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWR
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCH
TAAWVSAMRVLAGSLLLGSLFAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
FGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNGVVVARLRAAPDAGGPPAAGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA