| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316545
Identifier: 74316545
GI number: 74316545
Start: 554151
End: 554699
Strand: Reverse
Name: 74316545
Synonym: Tbd_0527
Alternate gene names: NA
Gene position: 554699-554151 (Counterclockwise)
Preceding gene: 74316546
Following gene: 74316544
Centisome position: 19.06
GC content: 71.77
Gene sequence:
>549_bases ATGACACGCTCGGTTATTGAGCTCCCCGTCACCGCCGACGACCGCAGGATCGCGCGGCTCGCGGCGGTGGCGATCGGCAT CACGCTCGCCGAAGCGGCGATCCCGAGTCCGGTGCCCGGGATCAAGCCCGGCCTTGCCAACATCGTCGTGCTGCTCGTGC TGCTGCAATACGGCTGGCGGACTGCGGCCTGGGTCTCGGCGATGCGCGTGCTGGCCGGCAGTCTGCTCCTGGGCAGTCTG TTCGCGCCCGGCTTCTGGTTGTCCGCGGCGGGGGCGACGGTCAGCCTGCTCGTTCTCGGACTCGCGCGCCATCTGCCCGC ACGCTATTTCGGACCGGTCAGCCTCTCGATACTTGCGGCTTTCGGACACATCGGAGGACAGCTCGCGCTCGCCGGCTGGT GGCTCCTGCCGGGCGCGGCGCTGATCGGCCTCATCCCGGTATTCGCCGCCGCCGCGCTGATCTTCGGCACCGTAAACGGC GTCGTCGTCGCGCGCCTGCGCGCAGCCCCCGACGCCGGCGGGCCGCCCGCCGCGGGCGCCGCGCAGTAG
Upstream 100 bases:
>100_bases CAGCTCTGCGTCAAGCAAGGCTGGCTCTCGCTCTCGGGCCAGGCGGCGCTATGCCTGCCGAACCAGGTCAGCGTGGAGAT CCGCGGCCGCAAGCCGGCCT
Downstream 100 bases:
>100_bases ATTATTGACCGCATCCGGGCGACAATCCGCGCCATGCACACCGCCCCCAAGACCGTCACACTCGCGCTGTCCGGCGCCTC GGGCATGGCCTACGGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWRTAAWVSAMRVLAGSLLLGSL FAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAAFGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNG VVVARLRAAPDAGGPPAAGAAQ
Sequences:
>Translated_182_residues MTRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWRTAAWVSAMRVLAGSLLLGSL FAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAAFGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNG VVVARLRAAPDAGGPPAAGAAQ >Mature_181_residues TRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWRTAAWVSAMRVLAGSLLLGSLF APGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAAFGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNGV VVARLRAAPDAGGPPAAGAAQ
Specific function: Unknown
COG id: COG4769
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18407; Mature: 18276
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWR CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCH TAAWVSAMRVLAGSLLLGSLFAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH FGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNGVVVARLRAAPDAGGPPAAGA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AQ CC >Mature Secondary Structure TRSVIELPVTADDRRIARLAAVAIGITLAEAAIPSPVPGIKPGLANIVVLLVLLQYGWR CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCH TAAWVSAMRVLAGSLLLGSLFAPGFWLSAAGATVSLLVLGLARHLPARYFGPVSLSILAA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH FGHIGGQLALAGWWLLPGAALIGLIPVFAAAALIFGTVNGVVVARLRAAPDAGGPPAAGA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA