Click here to switch to the map view.

The map label for this gene is secY [H]

Identifier: 74316443

GI number: 74316443

Start: 446492

End: 447805

Strand: Direct

Name: secY [H]

Synonym: Tbd_0425

Alternate gene names: 74316443

Gene position: 446492-447805 (Clockwise)

Preceding gene: 74316442

Following gene: 74316444

Centisome position: 15.34

GC content: 61.87

Gene sequence:

>1314_bases
GTGGCAACGCCCAAGACAGGCCTGAACAAATTCGGCGATCTCAAACGTCGCCTGCTGTTCCTGCTCGGCGCACTGATCGT
CTACCGTATCGGGACCTTCATCCCGGTTCCGGGTATCGATCCCCTCGTGCTCGACCAGCTGTTCAAGTCGCAGCAAGGCG
GCATCCTGGGCATGTTCAACATGTTCTCGGGTGGCGCGCTTTCCCGTTTCAGCGTCTTCGCGCTCGGGATCATGCCGTAT
ATCTCGGCGTCGATCATCGTGCAGCTCATGACGACGGTCTCGCCGCAGTTGGAGGCCTTGAAGAAGGAAGGCGAGGCCGG
GCGGCGCAAGATCACGCAGTACACGCGCTACGGGACGCTGTTCCTTGCGGTATTCCAGGCGCTGGGGATTGCGATCGCGC
TGGAAGCGCAGGCTGGGCTCGTGCTCGACCCGGGAATGGCCTTCCGTCTGATCACGGTCGTGACGCTGACCGCCGGCACG
ATGTTCCTGATGTGGCTCGGCGAGCAGATCACCGAACGCGGCCTCGGCAACGGCATTTCGATCATCATCTTCGCCGGTAT
CGCTGCCGGGCTTCCGTCCGCGATCGGCGGCACGCTCGAGCTGACTCGCACCGGCGCGTTCTCGATTCCGCTGGTGCTGA
TGCTGTTCGTCGGCGTGCTGCTCGTTACCGCCCTCGTGGTGTTCGTCGAACGCGGGCAGCGCAAAATCCTGGTCAACTAT
GCCAAGCGGCAGGTCGGCAAGATGGTCGTGGGCGGGCAGAGCTCGCACCTGCCGCTGAAGCTGAACATGGCCGGCGTGAT
TCCGCCGATCTTCGCGTCGAGCATCATCCTGTTCCCCGCGACCCTGGCCGGGTGGTTCGGCAGCGGCGAGAACATGGGAT
GGCTGAAGGATGTCGGGGCGACGTTGTCGCCCGGGCAGCCCGTATACGTGCTGTTGTACGCGCTCGCGATCATCTTCTTC
TGCTTTTTCTATACGGCGCTCGTGTTCAATCCCAAGGAAACGGCGGACAACCTCAAGAAGAGCGGCGCGTTCGTGCCGGG
AATCCGGCCCGGTGACCAGACCGCGCGCTACATCGACAAGATTCTGACGCGGCTGACCTTGGTCGGTGCGATTTACATCA
CGCTCGTCTGCCTGCTGCCCGAGTTTCTGATCCTGAAATGGAACGTCCCCTTCTATTTCGGCGGCACGTCCCTGCTGATC
ATCGTGGTGGTGACGATGGACTTCATGGCGCAGGTCCAGGCCTACGTGATGTCGCACCAGTACGAAGGACTGCTCAAGAA
GGCGAATTTCAAGAACGGTCTGGTGGGGCGGTGA

Upstream 100 bases:

>100_bases
GGCGATCAAGCTGAGCGGTGTCGCGGTGACCAAGGGTGCGCGTGCGGCCATCGAAGCGGCCGGCGGCAGCGTCGCCGAGT
AAGCGAGCGAGGATCGCGCG

Downstream 100 bases:

>100_bases
TGTCGAAGGAAGATGTCATTCAGATGCAGGGCGAAGTGATCGAAAACCTGCCGAACGCCACCTTTCGAGTCAAGCTGGAA
AACGGACACGTGCTACTGGG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MATPKTGLNKFGDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFNMFSGGALSRFSVFALGIMPY
ISASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTLFLAVFQALGIAIALEAQAGLVLDPGMAFRLITVVTLTAGT
MFLMWLGEQITERGLGNGISIIIFAGIAAGLPSAIGGTLELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNY
AKRQVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGATLSPGQPVYVLLYALAIIFF
CFFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARYIDKILTRLTLVGAIYITLVCLLPEFLILKWNVPFYFGGTSLLI
IVVVTMDFMAQVQAYVMSHQYEGLLKKANFKNGLVGR

Sequences:

>Translated_437_residues
MATPKTGLNKFGDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFNMFSGGALSRFSVFALGIMPY
ISASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTLFLAVFQALGIAIALEAQAGLVLDPGMAFRLITVVTLTAGT
MFLMWLGEQITERGLGNGISIIIFAGIAAGLPSAIGGTLELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNY
AKRQVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGATLSPGQPVYVLLYALAIIFF
CFFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARYIDKILTRLTLVGAIYITLVCLLPEFLILKWNVPFYFGGTSLLI
IVVVTMDFMAQVQAYVMSHQYEGLLKKANFKNGLVGR
>Mature_436_residues
ATPKTGLNKFGDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFNMFSGGALSRFSVFALGIMPYI
SASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTLFLAVFQALGIAIALEAQAGLVLDPGMAFRLITVVTLTAGTM
FLMWLGEQITERGLGNGISIIIFAGIAAGLPSAIGGTLELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNYA
KRQVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGATLSPGQPVYVLLYALAIIFFC
FFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARYIDKILTRLTLVGAIYITLVCLLPEFLILKWNVPFYFGGTSLLII
VVVTMDFMAQVQAYVMSHQYEGLLKKANFKNGLVGR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=69.9763593380615, Blast_Score=556, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47339; Mature: 47208

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPKTGLNKFGDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEHH
MFSGGALSRFSVFALGIMPYISASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
FLAVFQALGIAIALEAQAGLVLDPGMAFRLITVVTLTAGTMFLMWLGEQITERGLGNGIS
HHHHHHHHCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IIIFAGIAAGLPSAIGGTLELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNY
HHHHHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AKRQVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGA
HHHHHCCEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
TLSPGQPVYVLLYALAIIFFCFFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARYIDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ILTRLTLVGAIYITLVCLLPEFLILKWNVPFYFGGTSLLIIVVVTMDFMAQVQAYVMSHQ
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
YEGLLKKANFKNGLVGR
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ATPKTGLNKFGDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEHH
MFSGGALSRFSVFALGIMPYISASIIVQLMTTVSPQLEALKKEGEAGRRKITQYTRYGTL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
FLAVFQALGIAIALEAQAGLVLDPGMAFRLITVVTLTAGTMFLMWLGEQITERGLGNGIS
HHHHHHHHCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IIIFAGIAAGLPSAIGGTLELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNY
HHHHHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AKRQVGKMVVGGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGA
HHHHHCCEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
TLSPGQPVYVLLYALAIIFFCFFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARYIDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ILTRLTLVGAIYITLVCLLPEFLILKWNVPFYFGGTSLLIIVVVTMDFMAQVQAYVMSHQ
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
YEGLLKKANFKNGLVGR
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]