| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316390
Identifier: 74316390
GI number: 74316390
Start: 400920
End: 401489
Strand: Reverse
Name: 74316390
Synonym: Tbd_0372
Alternate gene names: NA
Gene position: 401489-400920 (Counterclockwise)
Preceding gene: 74316392
Following gene: 74316384
Centisome position: 13.8
GC content: 57.72
Gene sequence:
>570_bases ATGATCAGCTTGGGCATCAAAGCTGCACGGCGAGGTTCGGAAAGTACGACTCCGGTACCCATTGATCTAACGCCTAGGGC AATTACCTTGTTGGGCGGCGCCAGCTCCTTGCAGATGAAGCGATTCAATCCGTTTGACTGGGTCTCCGCAATCCGTCGGG GCTTCCCTTCAAAGACGCTTGATGCGTTTGCTACCAACGTAGGCGCATCAAATTCCGAGCTTGCGGCGATGTTGGGTCTT TCCGCGCGCGCCTGGGCCGGACGCAGGTGCAAACAGCGCTTGTCGCCCGCCGACTCAGAACGTCTGCTCCGCCTGGCAAA GGCTGTCGCACGGGCCGAGGACGTTTTTGGTGATCTGTCCAATGGCCTTGCTTGGTTGAATAACAGCAATAGGTCGCTAG TGGCGAGACGCCCGCTTCTCTGGTGGATACGGAAGTCGGCTCTGAATTGGTGGCTGATGTCCTCGGCAGAATCGAATACG GGATTGTCGCCTGACCACTCACGAGTTCGGTCAGCAGCAGGGTCTTCTCGCTCTGCCAGCTTGGCGGAGGACGTTCAGAC GCGTTATTGA
Upstream 100 bases:
>100_bases TCAACAGAGGAAGAATGCCATCGAGAGTGATGAAAGACCGAAATTGATCGTGTTGTAGCGCTATGCGTATGAACACTGTG ATGCAGGAATCGGAAACGCA
Downstream 100 bases:
>100_bases AATGGTCGCGGCAGATGCGTCAAGGTTCGGATTGGCGGTGCCACAGTGTGGGCAACGTTCTAGCTTTAGATTTTCAGAGA GTGAGAGCATAGGTGTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTLDAFATNVGASNSELAAMLGL SARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLSNGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNT GLSPDHSRVRSAAGSSRSASLAEDVQTRY
Sequences:
>Translated_189_residues MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTLDAFATNVGASNSELAAMLGL SARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLSNGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNT GLSPDHSRVRSAAGSSRSASLAEDVQTRY >Mature_189_residues MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTLDAFATNVGASNSELAAMLGL SARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLSNGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNT GLSPDHSRVRSAAGSSRSASLAEDVQTRY
Specific function: Unknown
COG id: COG5642
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20599; Mature: 20599
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTL CCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH DAFATNVGASNSELAAMLGLSARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLS HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNTGLSPDHSRVRSAAGSSRSAS CCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHH LAEDVQTRY HHHHHHHCC >Mature Secondary Structure MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTL CCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH DAFATNVGASNSELAAMLGLSARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLS HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNTGLSPDHSRVRSAAGSSRSAS CCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHH LAEDVQTRY HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA