Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316390

Identifier: 74316390

GI number: 74316390

Start: 400920

End: 401489

Strand: Reverse

Name: 74316390

Synonym: Tbd_0372

Alternate gene names: NA

Gene position: 401489-400920 (Counterclockwise)

Preceding gene: 74316392

Following gene: 74316384

Centisome position: 13.8

GC content: 57.72

Gene sequence:

>570_bases
ATGATCAGCTTGGGCATCAAAGCTGCACGGCGAGGTTCGGAAAGTACGACTCCGGTACCCATTGATCTAACGCCTAGGGC
AATTACCTTGTTGGGCGGCGCCAGCTCCTTGCAGATGAAGCGATTCAATCCGTTTGACTGGGTCTCCGCAATCCGTCGGG
GCTTCCCTTCAAAGACGCTTGATGCGTTTGCTACCAACGTAGGCGCATCAAATTCCGAGCTTGCGGCGATGTTGGGTCTT
TCCGCGCGCGCCTGGGCCGGACGCAGGTGCAAACAGCGCTTGTCGCCCGCCGACTCAGAACGTCTGCTCCGCCTGGCAAA
GGCTGTCGCACGGGCCGAGGACGTTTTTGGTGATCTGTCCAATGGCCTTGCTTGGTTGAATAACAGCAATAGGTCGCTAG
TGGCGAGACGCCCGCTTCTCTGGTGGATACGGAAGTCGGCTCTGAATTGGTGGCTGATGTCCTCGGCAGAATCGAATACG
GGATTGTCGCCTGACCACTCACGAGTTCGGTCAGCAGCAGGGTCTTCTCGCTCTGCCAGCTTGGCGGAGGACGTTCAGAC
GCGTTATTGA

Upstream 100 bases:

>100_bases
TCAACAGAGGAAGAATGCCATCGAGAGTGATGAAAGACCGAAATTGATCGTGTTGTAGCGCTATGCGTATGAACACTGTG
ATGCAGGAATCGGAAACGCA

Downstream 100 bases:

>100_bases
AATGGTCGCGGCAGATGCGTCAAGGTTCGGATTGGCGGTGCCACAGTGTGGGCAACGTTCTAGCTTTAGATTTTCAGAGA
GTGAGAGCATAGGTGTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTLDAFATNVGASNSELAAMLGL
SARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLSNGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNT
GLSPDHSRVRSAAGSSRSASLAEDVQTRY

Sequences:

>Translated_189_residues
MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTLDAFATNVGASNSELAAMLGL
SARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLSNGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNT
GLSPDHSRVRSAAGSSRSASLAEDVQTRY
>Mature_189_residues
MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTLDAFATNVGASNSELAAMLGL
SARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLSNGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNT
GLSPDHSRVRSAAGSSRSASLAEDVQTRY

Specific function: Unknown

COG id: COG5642

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20599; Mature: 20599

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTL
CCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH
DAFATNVGASNSELAAMLGLSARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLS
HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
NGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNTGLSPDHSRVRSAAGSSRSAS
CCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHH
LAEDVQTRY
HHHHHHHCC
>Mature Secondary Structure
MISLGIKAARRGSESTTPVPIDLTPRAITLLGGASSLQMKRFNPFDWVSAIRRGFPSKTL
CCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH
DAFATNVGASNSELAAMLGLSARAWAGRRCKQRLSPADSERLLRLAKAVARAEDVFGDLS
HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
NGLAWLNNSNRSLVARRPLLWWIRKSALNWWLMSSAESNTGLSPDHSRVRSAAGSSRSAS
CCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHH
LAEDVQTRY
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA