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The map label for this gene is yxkH [H]

Identifier: 74316328

GI number: 74316328

Start: 333994

End: 334806

Strand: Reverse

Name: yxkH [H]

Synonym: Tbd_0310

Alternate gene names: 74316328

Gene position: 334806-333994 (Counterclockwise)

Preceding gene: 74316329

Following gene: 74316327

Centisome position: 11.51

GC content: 69.37

Gene sequence:

>813_bases
GTGCCGCGCCGCCGCATGAGCTGGATCGACCCCGTCTCGCGCGCACTTCACGACCAGGCCGGCCAGCACGGCCCTGTCAT
GCTCATGTATCACGCGGTCGCGCCCGGCAAGGGCACGCCGGCGTGGCCCTGGGCCGTCTCGATGCGTCGGTTCTGCGAAC
AGCTCGATTTTCTCGCGGCCGAGGGCTACGCCACACCGACCATGGGCGAACTCGTCGCCTCGCCGCCCAGTCGGCCCGGG
CGCACCGCGGTCATCACCTTCGACGACGGCTATGTCGACAACCTCGGGGCCTGCGAAGAACTCAAGAAACGCGGCATGCG
CGCCAGCTTTTTCATCGTCTCGGGCTCGGTCGGCACGACGCCCGCCTGGCGCGACGACGGACGGCCCGCGGCGCGCCTGC
TCAACGGCGACGAACTGCGCGAGATGCGCGCCGAGGGCATGGAAATCGGGTCACACACGGTCAACCACAGCCGCTTGACC
GATCTCGACGATGTCAGCCTGACGCACGAACTGGCGGACTCGAAGCGCGCGCTCGAAGATCTGTTGGGCGAACGTGTCGG
CAGTTTCGCCTACCCCTACGGCGCCTGGGACGCACGCTGCGCCGACGCCGTCGAAGCGGCCGGCTACACCGCCGCATGCA
CGACGCGGACCGGCTGGGCCTTGCGCGACAACGCGCCCCATCGGTTGCGGCGCCTGACCGTATTCAACACCGACACCGTC
GGCCGCTTCGCGCGCAAGCTCTATTTCGCGAGCCACGACGTCGGCTGGCCCGACCTCGCACGCTACGCGCTGCGCCGTCT
GAGGGGCGTCTGA

Upstream 100 bases:

>100_bases
TGGCCGGCGTCGGCGGGTCGGTCTACGCGGTCTCCTTCCTCTACCTGCCGATTCCGGCGCTCGCCACAGAGACGAGCCGC
TGGAAAAGCAAACTCAAACT

Downstream 100 bases:

>100_bases
GGTGGCCGCCAAGCCGCTCGTCTCGATCGTCATGCCGTGCTACGACGCCGCGGCGCATTTGCCGGCAAGCGTAGGCAGCG
TACTCGCGCAGACCTTCGCG

Product: putative polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPRRRMSWIDPVSRALHDQAGQHGPVMLMYHAVAPGKGTPAWPWAVSMRRFCEQLDFLAAEGYATPTMGELVASPPSRPG
RTAVITFDDGYVDNLGACEELKKRGMRASFFIVSGSVGTTPAWRDDGRPAARLLNGDELREMRAEGMEIGSHTVNHSRLT
DLDDVSLTHELADSKRALEDLLGERVGSFAYPYGAWDARCADAVEAAGYTAACTTRTGWALRDNAPHRLRRLTVFNTDTV
GRFARKLYFASHDVGWPDLARYALRRLRGV

Sequences:

>Translated_270_residues
MPRRRMSWIDPVSRALHDQAGQHGPVMLMYHAVAPGKGTPAWPWAVSMRRFCEQLDFLAAEGYATPTMGELVASPPSRPG
RTAVITFDDGYVDNLGACEELKKRGMRASFFIVSGSVGTTPAWRDDGRPAARLLNGDELREMRAEGMEIGSHTVNHSRLT
DLDDVSLTHELADSKRALEDLLGERVGSFAYPYGAWDARCADAVEAAGYTAACTTRTGWALRDNAPHRLRRLTVFNTDTV
GRFARKLYFASHDVGWPDLARYALRRLRGV
>Mature_269_residues
PRRRMSWIDPVSRALHDQAGQHGPVMLMYHAVAPGKGTPAWPWAVSMRRFCEQLDFLAAEGYATPTMGELVASPPSRPGR
TAVITFDDGYVDNLGACEELKKRGMRASFFIVSGSVGTTPAWRDDGRPAARLLNGDELREMRAEGMEIGSHTVNHSRLTD
LDDVSLTHELADSKRALEDLLGERVGSFAYPYGAWDARCADAVEAAGYTAACTTRTGWALRDNAPHRLRRLTVFNTDTVG
RFARKLYFASHDVGWPDLARYALRRLRGV

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=212, Percent_Identity=30.188679245283, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 29938; Mature: 29807

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRRMSWIDPVSRALHDQAGQHGPVMLMYHAVAPGKGTPAWPWAVSMRRFCEQLDFLAA
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
EGYATPTMGELVASPPSRPGRTAVITFDDGYVDNLGACEELKKRGMRASFFIVSGSVGTT
CCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCC
PAWRDDGRPAARLLNGDELREMRAEGMEIGSHTVNHSRLTDLDDVSLTHELADSKRALED
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLGERVGSFAYPYGAWDARCADAVEAAGYTAACTTRTGWALRDNAPHRLRRLTVFNTDTV
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEECCCCHHHHHEEEEECCHHH
GRFARKLYFASHDVGWPDLARYALRRLRGV
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRRRMSWIDPVSRALHDQAGQHGPVMLMYHAVAPGKGTPAWPWAVSMRRFCEQLDFLAA
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
EGYATPTMGELVASPPSRPGRTAVITFDDGYVDNLGACEELKKRGMRASFFIVSGSVGTT
CCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCC
PAWRDDGRPAARLLNGDELREMRAEGMEIGSHTVNHSRLTDLDDVSLTHELADSKRALED
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLGERVGSFAYPYGAWDARCADAVEAAGYTAACTTRTGWALRDNAPHRLRRLTVFNTDTV
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEECCCCHHHHHEEEEECCHHH
GRFARKLYFASHDVGWPDLARYALRRLRGV
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]