| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316326
Identifier: 74316326
GI number: 74316326
Start: 331980
End: 332909
Strand: Reverse
Name: 74316326
Synonym: Tbd_0308
Alternate gene names: NA
Gene position: 332909-331980 (Counterclockwise)
Preceding gene: 74316327
Following gene: 74316324
Centisome position: 11.44
GC content: 68.6
Gene sequence:
>930_bases ATGTTCGCCGTCACCGTCGCCTTCTGCACCTACCGCCGACCCGAGCGCCTCGAAAAACTGGTCGCGGCGCTGCGTTCGCA GACCTGCCCGCTGCCTTTCGAAATCCTCGCCGTCAACAACAACAGCCCCGACGACACGCTCGCCGTCCTAGAGCGCCTGC GTGCGGCCCCGGGTGCCCCGCTCCACGTCGTCACCGAAACCGCGCCCGGCATCGTCCCGGCGCGCAACCGCGCGCTTGCC GAAACACGCGAGCGCGACATCCTGGTTTTCATCGACGACGACGAACTGCCCCAGCCCGGCTTTCTCGCCGCGGCGTGCGC GGCGATCGTCGACGAAGGCGCGCACTGCGTCGGCGGGCGCATCGACATCGACTTCAGTCCCCACCGGCGTCCGCCCTGGC TCGACGACGAGGTCGCGGGGTTTCTCGGCCGCCTCGACCATGGCCCGGCCGACTTCTGGGTCACCGACAGCGCGACGCCG CTGTGGAGCGGCAACATCGCATACGCGATGGCGTTCTTTCGCGCCCACCCCGAGCTCAACTTCGACCCGCGCTACAACCG CGAAGGCACCGACGTCGGCGGCGGCGAAGACGCGATGATGCTGCGCGCGCTGCTCGCCCTCAGCGCAAAAATCCGCTACC GCCCGGACATGGCGGTATGGCACGCGGTCGACCCGTGGAAGCTCAAGCGCCGTTATTTCGTGAAGCTGCATTACCGCGCG GGCCTGCGCCACGGCCAGTTCCGCCTGCCGGATTTTCCGCGCACCGTGCTTGGCGTGCCGCCTTTTCTGCTCGGCCAGTT CGTCAGCCATTGCCTCAAAACGCTCTGGCACCTGTTGCCGGGCGCCCCCAACCCGGTCCGGCAGGCGATGAACGCGTCGC ACGCCTTCGGCCTGATCGTCGGCTACCAGCGCCGCACCGAGCCCTCATGA
Upstream 100 bases:
>100_bases CTACGTGCGGCGCAGCCTCCGCCGGGCGCCGGGCTTCGCGCGAAGCCGAGCGCGCGGCGGAGGCTGCGCCGCCGGGCGTC GCCCTGCCGCAGGCCTGAAC
Downstream 100 bases:
>100_bases ATACCACGCCCCTAACGTCGGACAACGACGGCCCCGTCTTCATCGTCGGCGCGCCGCGCTCGGGCACGACGATGCTGCAA TACCGGCTGCGCAACCTGCC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Family 2 Glycosyl Transferase; Glycosyltransferase; Succinoglycan Biosynthesis Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Arylsulfatase; Glycosyl Transferase
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MFAVTVAFCTYRRPERLEKLVAALRSQTCPLPFEILAVNNNSPDDTLAVLERLRAAPGAPLHVVTETAPGIVPARNRALA ETRERDILVFIDDDELPQPGFLAAACAAIVDEGAHCVGGRIDIDFSPHRRPPWLDDEVAGFLGRLDHGPADFWVTDSATP LWSGNIAYAMAFFRAHPELNFDPRYNREGTDVGGGEDAMMLRALLALSAKIRYRPDMAVWHAVDPWKLKRRYFVKLHYRA GLRHGQFRLPDFPRTVLGVPPFLLGQFVSHCLKTLWHLLPGAPNPVRQAMNASHAFGLIVGYQRRTEPS
Sequences:
>Translated_309_residues MFAVTVAFCTYRRPERLEKLVAALRSQTCPLPFEILAVNNNSPDDTLAVLERLRAAPGAPLHVVTETAPGIVPARNRALA ETRERDILVFIDDDELPQPGFLAAACAAIVDEGAHCVGGRIDIDFSPHRRPPWLDDEVAGFLGRLDHGPADFWVTDSATP LWSGNIAYAMAFFRAHPELNFDPRYNREGTDVGGGEDAMMLRALLALSAKIRYRPDMAVWHAVDPWKLKRRYFVKLHYRA GLRHGQFRLPDFPRTVLGVPPFLLGQFVSHCLKTLWHLLPGAPNPVRQAMNASHAFGLIVGYQRRTEPS >Mature_309_residues MFAVTVAFCTYRRPERLEKLVAALRSQTCPLPFEILAVNNNSPDDTLAVLERLRAAPGAPLHVVTETAPGIVPARNRALA ETRERDILVFIDDDELPQPGFLAAACAAIVDEGAHCVGGRIDIDFSPHRRPPWLDDEVAGFLGRLDHGPADFWVTDSATP LWSGNIAYAMAFFRAHPELNFDPRYNREGTDVGGGEDAMMLRALLALSAKIRYRPDMAVWHAVDPWKLKRRYFVKLHYRA GLRHGQFRLPDFPRTVLGVPPFLLGQFVSHCLKTLWHLLPGAPNPVRQAMNASHAFGLIVGYQRRTEPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34503; Mature: 34503
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAVTVAFCTYRRPERLEKLVAALRSQTCPLPFEILAVNNNSPDDTLAVLERLRAAPGAP CEEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC LHVVTETAPGIVPARNRALAETRERDILVFIDDDELPQPGFLAAACAAIVDEGAHCVGGR EEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCE IDIDFSPHRRPPWLDDEVAGFLGRLDHGPADFWVTDSATPLWSGNIAYAMAFFRAHPELN EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCC FDPRYNREGTDVGGGEDAMMLRALLALSAKIRYRPDMAVWHAVDPWKLKRRYFVKLHYRA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHCCEEEEEEEEHH GLRHGQFRLPDFPRTVLGVPPFLLGQFVSHCLKTLWHLLPGAPNPVRQAMNASHAFGLIV CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEE GYQRRTEPS ECCCCCCCC >Mature Secondary Structure MFAVTVAFCTYRRPERLEKLVAALRSQTCPLPFEILAVNNNSPDDTLAVLERLRAAPGAP CEEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC LHVVTETAPGIVPARNRALAETRERDILVFIDDDELPQPGFLAAACAAIVDEGAHCVGGR EEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCE IDIDFSPHRRPPWLDDEVAGFLGRLDHGPADFWVTDSATPLWSGNIAYAMAFFRAHPELN EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCC FDPRYNREGTDVGGGEDAMMLRALLALSAKIRYRPDMAVWHAVDPWKLKRRYFVKLHYRA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHCCEEEEEEEEHH GLRHGQFRLPDFPRTVLGVPPFLLGQFVSHCLKTLWHLLPGAPNPVRQAMNASHAFGLIV CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEE GYQRRTEPS ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA