| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316321
Identifier: 74316321
GI number: 74316321
Start: 325204
End: 326067
Strand: Direct
Name: 74316321
Synonym: Tbd_0303
Alternate gene names: NA
Gene position: 325204-326067 (Clockwise)
Preceding gene: 74316320
Following gene: 74316322
Centisome position: 11.18
GC content: 68.17
Gene sequence:
>864_bases ATGAGTGAACCGAAGCCCGCGTGGCCGGTCGCGGTGTTCGCGCACAACGAGGCGCGCAACATCGTCGCCTGTCTCGACAG CCTGCAGGGCGCCAGCCATCCGATCGACTGCCACGTGCTCGCCAACGCGTGCAGCGACGACACCGAAGCGCTGGTGCGCG ACTATGCCGAGCGGCACCCGAACGTCCACCTCGCGTCGATCGCGCTCGGTGACAAGGCCAACGCCTGGAACGTCTTCGTG CACGAGCTTGCGCCGGCCGGTGCGCCGTACTATTTTTTCATCGACGGCGACGTTCGCGCGACGCCCGGTTCGCTCGATGC GCTGGCGCACCAGCTCGCACGCCATGCCGATGCGAACGGCGCGTCGGCGCTGCCGTGCAGCGGACGCGGCGTCGAGGCCT TCCGCCGCGACATGCTGAAAGACCGGGGTGTCGCAGGCAACCTCTATGCGCTGCGCGGCAGCTTCGTCGATCGCATCCGC GAGCGCGGCATCGCGATGCCGGTCGGAACCATCGGCGAGGATGCCCTGATGGGCGCGATGCTGAAATGGGATTTGCGCGG CGACACGCGCTGGGATGACAGCAAGGTCGTCGTCGCCGAGGCGGCGGGGTTCACCTTCGATTCGGTCTCGCCCTGGCGCT CGCGCGAATGGCGCAAGTATTTCCGCCGCCGCGTGCGCTACAGTGTGCGGGCTTACCAGAACCGCATGCTCGGGCGCGCG ATCCAGCCGGCCGGGTTCGAGGCGTTGCCGCGCCACGTACGCGAGCTGTACCGCCGCTATCCCGAACTGCTGAGCGTCGG CTGGCGCGGCGTCGACACCGTGTTCGACTGGTTTGCCGTCCGTGAAATCAAGGCCTCGCGCTGA
Upstream 100 bases:
>100_bases CATCGCCTCGCGCTCGGACGCGCCGCCCTGCAGCGCGTGCAGCGCGAATTCGCCTGGGAGCGCGTCGCAGAAAAGACCCG CGCATTGGACAGAGGACAGC
Downstream 100 bases:
>100_bases GCGGCGCCGCATTCGAACCGAGGAGAAGAAGTCGTCATGATCCGCGCCGAGAAGATTCTTCTGACCGCACTGGCGGCATG GCTCCCGTTGCCTGCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSEPKPAWPVAVFAHNEARNIVACLDSLQGASHPIDCHVLANACSDDTEALVRDYAERHPNVHLASIALGDKANAWNVFV HELAPAGAPYYFFIDGDVRATPGSLDALAHQLARHADANGASALPCSGRGVEAFRRDMLKDRGVAGNLYALRGSFVDRIR ERGIAMPVGTIGEDALMGAMLKWDLRGDTRWDDSKVVVAEAAGFTFDSVSPWRSREWRKYFRRRVRYSVRAYQNRMLGRA IQPAGFEALPRHVRELYRRYPELLSVGWRGVDTVFDWFAVREIKASR
Sequences:
>Translated_287_residues MSEPKPAWPVAVFAHNEARNIVACLDSLQGASHPIDCHVLANACSDDTEALVRDYAERHPNVHLASIALGDKANAWNVFV HELAPAGAPYYFFIDGDVRATPGSLDALAHQLARHADANGASALPCSGRGVEAFRRDMLKDRGVAGNLYALRGSFVDRIR ERGIAMPVGTIGEDALMGAMLKWDLRGDTRWDDSKVVVAEAAGFTFDSVSPWRSREWRKYFRRRVRYSVRAYQNRMLGRA IQPAGFEALPRHVRELYRRYPELLSVGWRGVDTVFDWFAVREIKASR >Mature_286_residues SEPKPAWPVAVFAHNEARNIVACLDSLQGASHPIDCHVLANACSDDTEALVRDYAERHPNVHLASIALGDKANAWNVFVH ELAPAGAPYYFFIDGDVRATPGSLDALAHQLARHADANGASALPCSGRGVEAFRRDMLKDRGVAGNLYALRGSFVDRIRE RGIAMPVGTIGEDALMGAMLKWDLRGDTRWDDSKVVVAEAAGFTFDSVSPWRSREWRKYFRRRVRYSVRAYQNRMLGRAI QPAGFEALPRHVRELYRRYPELLSVGWRGVDTVFDWFAVREIKASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32124; Mature: 31992
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPKPAWPVAVFAHNEARNIVACLDSLQGASHPIDCHVLANACSDDTEALVRDYAERHP CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC NVHLASIALGDKANAWNVFVHELAPAGAPYYFFIDGDVRATPGSLDALAHQLARHADANG CEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC ASALPCSGRGVEAFRRDMLKDRGVAGNLYALRGSFVDRIRERGIAMPVGTIGEDALMGAM CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LKWDLRGDTRWDDSKVVVAEAAGFTFDSVSPWRSREWRKYFRRRVRYSVRAYQNRMLGRA HEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC IQPAGFEALPRHVRELYRRYPELLSVGWRGVDTVFDWFAVREIKASR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEPKPAWPVAVFAHNEARNIVACLDSLQGASHPIDCHVLANACSDDTEALVRDYAERHP CCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC NVHLASIALGDKANAWNVFVHELAPAGAPYYFFIDGDVRATPGSLDALAHQLARHADANG CEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC ASALPCSGRGVEAFRRDMLKDRGVAGNLYALRGSFVDRIRERGIAMPVGTIGEDALMGAM CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LKWDLRGDTRWDDSKVVVAEAAGFTFDSVSPWRSREWRKYFRRRVRYSVRAYQNRMLGRA HEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC IQPAGFEALPRHVRELYRRYPELLSVGWRGVDTVFDWFAVREIKASR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA