Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316268

Identifier: 74316268

GI number: 74316268

Start: 272687

End: 273364

Strand: Direct

Name: 74316268

Synonym: Tbd_0250

Alternate gene names: NA

Gene position: 272687-273364 (Clockwise)

Preceding gene: 74316267

Following gene: 74316269

Centisome position: 9.37

GC content: 68.14

Gene sequence:

>678_bases
ATGAAAAAAATACTCGGCGTCACGGCGCTCGCGCTGGCGCTCACCGGTTGCATCAGTTTCGACGGCCGCGGTAGCGCGGC
GCCGACGATCCACTACGTCCTCGACGATGTCGTGCCGGCGGACACGGCGGCACCGCCCGCGGGCAGGGCTGCCGACGCCG
GCGTCACGCCACGCACGCTTCTCGTGCTCGACACGACGAGCAGCGGTTTCTATAACAACGACCAGCTCGTCTTCAGCCGC
ACGCCGGGCACGCGCGGCTACTACCAGTTCGCACGCTGGACCGAGCGCCCGGGCAAGCGCTTCGCCGATCTCCTGCGCAG
CAGACTCGACCGGCTCGGAGGCTACCGCGTGGCGGCGGCGAGCGGGCAGGTCCGCGGCGACCTCCTGCTCGATACCGAAT
TGATCGAGTTCTATCACGATGCGCGCAGCCAGCCGGGGGAGGTCCATCTGTTGCTGCGCGCGGACCTGCTCGACCTCAAG
CGGCGCACGCTGCTCGACCGACGCGTGTTCGAGCAGCGCGTTCCGGTCGCCACCTACGATGCCGCGGGGGCCGCTGCGGC
GTCGGGCGTCGCGGTCGGCCACACGCTAGACCAACTCGCCGCCTGGCTCGCGAGCTTCGGTCAAACTGCCTACAATCCAG
AACGTAACGCCCCAACGATAAGAGGAGAGTCGCCATGA

Upstream 100 bases:

>100_bases
GTGCCGACACGCTGACGACGACCGGCCAGCGCCTGTCGAACCCGCGCGGCATCCTGTTCGGCCCGAGCGTCGAGCAGCTC
GGTCCCGGAGAAGAATTGCC

Downstream 100 bases:

>100_bases
AACGCCTGCTAGCCGCCCTCAGCCTTTCTTTCTTCGCCGCAGCCGCACACGCCGAAATCTCGCAGAAGTTCGGCTCCCTC
GAGATCCATTACAACGCCCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKKILGVTALALALTGCISFDGRGSAAPTIHYVLDDVVPADTAAPPAGRAADAGVTPRTLLVLDTTSSGFYNNDQLVFSR
TPGTRGYYQFARWTERPGKRFADLLRSRLDRLGGYRVAAASGQVRGDLLLDTELIEFYHDARSQPGEVHLLLRADLLDLK
RRTLLDRRVFEQRVPVATYDAAGAAAASGVAVGHTLDQLAAWLASFGQTAYNPERNAPTIRGESP

Sequences:

>Translated_225_residues
MKKILGVTALALALTGCISFDGRGSAAPTIHYVLDDVVPADTAAPPAGRAADAGVTPRTLLVLDTTSSGFYNNDQLVFSR
TPGTRGYYQFARWTERPGKRFADLLRSRLDRLGGYRVAAASGQVRGDLLLDTELIEFYHDARSQPGEVHLLLRADLLDLK
RRTLLDRRVFEQRVPVATYDAAGAAAASGVAVGHTLDQLAAWLASFGQTAYNPERNAPTIRGESP
>Mature_225_residues
MKKILGVTALALALTGCISFDGRGSAAPTIHYVLDDVVPADTAAPPAGRAADAGVTPRTLLVLDTTSSGFYNNDQLVFSR
TPGTRGYYQFARWTERPGKRFADLLRSRLDRLGGYRVAAASGQVRGDLLLDTELIEFYHDARSQPGEVHLLLRADLLDLK
RRTLLDRRVFEQRVPVATYDAAGAAAASGVAVGHTLDQLAAWLASFGQTAYNPERNAPTIRGESP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24298; Mature: 24298

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILGVTALALALTGCISFDGRGSAAPTIHYVLDDVVPADTAAPPAGRAADAGVTPRTL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LVLDTTSSGFYNNDQLVFSRTPGTRGYYQFARWTERPGKRFADLLRSRLDRLGGYRVAAA
EEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEC
SGQVRGDLLLDTELIEFYHDARSQPGEVHLLLRADLLDLKRRTLLDRRVFEQRVPVATYD
CCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
AAGAAAASGVAVGHTLDQLAAWLASFGQTAYNPERNAPTIRGESP
CCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKILGVTALALALTGCISFDGRGSAAPTIHYVLDDVVPADTAAPPAGRAADAGVTPRTL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LVLDTTSSGFYNNDQLVFSRTPGTRGYYQFARWTERPGKRFADLLRSRLDRLGGYRVAAA
EEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEC
SGQVRGDLLLDTELIEFYHDARSQPGEVHLLLRADLLDLKRRTLLDRRVFEQRVPVATYD
CCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC
AAGAAAASGVAVGHTLDQLAAWLASFGQTAYNPERNAPTIRGESP
CCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA