| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is accC [H]
Identifier: 74316199
GI number: 74316199
Start: 193851
End: 195200
Strand: Reverse
Name: accC [H]
Synonym: Tbd_0181
Alternate gene names: 74316199
Gene position: 195200-193851 (Counterclockwise)
Preceding gene: 74316200
Following gene: 74316198
Centisome position: 6.71
GC content: 65.11
Gene sequence:
>1350_bases ATGTTTGAAAAGATTCTGATCGCCAACCGCGGCGAGATAGCCCTGAGAATCCAGCGCGCCTGCCGCGAAATGGGGATCAA GACGGTCGCGGTCTACTCGGAGGCCGACCGCGACGCCAAATACGTCAAGCTCGCCGACGAATCGGTGTGCATCGGACCCG CCCCGTCCGCGCAAAGCTATCTGCACGTGCCGTCGATCATCGCTGCCGCCGAAGTCACCGACGCCGCCGCCATCCATCCC GGCTACGGCTTCCTTTCCGAGAACGCCGACTTCGCCGAACGCGTCGAATCGTCGGGTTTCACGTTCATCGGCCCGCGCCC CGACAACATCCGCCTGATGGGCGACAAAGTCGCGGCCAAGCAGGCCATGATCGACGCCAAGGTGCCCTGCGTGCCCGGCT CGGACGGCGCACTCGCCGATGACCCGCAGGAGATCCTCAAGACCGCGCGCGCGATCGGCTACCCGGTCATCATCAAGGCC GCGGGCGGCGGCGGCGGACGCGGGATGCGCGTCGTCCACACCGAAGCCGCGCTGCTCAACGCCGTCACGATGACCAAGAC CGAAGCCGGCGCCGCCTTCGGCAATCCGATGGTCTACATGGAAAAGTTTCTCGAGACGCCGCGCCATATCGAGATCCAGA TCCTTGCCGACGAACACGGCAATGCCGTCCATCTCGGCGAGCGCGACTGCTCGATGCAGCGCCGCCACCAGAAGGTTCTC GAGGAAGCGCCGGCGCCCGGACTCGACCCGAAGCTGCGCGACAAGATCGGCGAGCGCTGCGCCGAAGCCTGCCGCAAGAT CGGCTACCGCGGCGCGGGCACCTTCGAATTCCTGTACGAGAACGGCGAGTTCTACTTCATCGAGATGAACACGCGCGTCC AGGTCGAGCATCCGGTCACCGAACTCATTACCGGCATCGACATCGTGCAGACGCAGATCCGCGTCGCCGCCGGCGAGAAG CTGCCCTTCCAGCAGAAGGACATCCGCTTTCGCGGGCACGCGGTCGAGTGCCGCATCAATGCCGAGCACCCGACGACCTT CGTGCCGAGCCCGGGCAAACTCACCAATTACCACGCCGCGGGCGGCCCCGGCATCCGCGTCGACTCGCACGTCTACCACG GCTATTACGTGCCGCCGCATTACGACTCGATGATCGGCAAGCTCATCGCCTACGGCGACACCCGCGACCAGGCCATCGCC CGCATGCGCGGGGCGCTCATGGAAATGGTCGTCGAAGGCATCCAGAGCAATATTCCGCTGCATCAGGAGCTGATGAATGA CGCGGCGTTCATCGCCGGCGGGACGAGCATCCACTACCTCGAGCACAAGCTCGCGGGGGAGAAAGGGTGA
Upstream 100 bases:
>100_bases GGCGAACCCCTGTTTGTCATCGCGTGAAGCAGCGGCCATGAGGCGTCAGGCGTAGCCGTCGTCACTTCCCGTCCCTCATC CTCACCGAGCCTCATCCAAC
Downstream 100 bases:
>100_bases GGGGGAGGGTTCAGGATTTAGGGGCTAGGATCTAGGGACTAGGGGGGTGCGGCCGGAGGCCGCGCCCCATCAAACTAGGC GCGAAGCACAAAGCCCCCTG
Product: acetyl-CoA carboxylase biotin carboxylase subunit
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MFEKILIANRGEIALRIQRACREMGIKTVAVYSEADRDAKYVKLADESVCIGPAPSAQSYLHVPSIIAAAEVTDAAAIHP GYGFLSENADFAERVESSGFTFIGPRPDNIRLMGDKVAAKQAMIDAKVPCVPGSDGALADDPQEILKTARAIGYPVIIKA AGGGGGRGMRVVHTEAALLNAVTMTKTEAGAAFGNPMVYMEKFLETPRHIEIQILADEHGNAVHLGERDCSMQRRHQKVL EEAPAPGLDPKLRDKIGERCAEACRKIGYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVTELITGIDIVQTQIRVAAGEK LPFQQKDIRFRGHAVECRINAEHPTTFVPSPGKLTNYHAAGGPGIRVDSHVYHGYYVPPHYDSMIGKLIAYGDTRDQAIA RMRGALMEMVVEGIQSNIPLHQELMNDAAFIAGGTSIHYLEHKLAGEKG
Sequences:
>Translated_449_residues MFEKILIANRGEIALRIQRACREMGIKTVAVYSEADRDAKYVKLADESVCIGPAPSAQSYLHVPSIIAAAEVTDAAAIHP GYGFLSENADFAERVESSGFTFIGPRPDNIRLMGDKVAAKQAMIDAKVPCVPGSDGALADDPQEILKTARAIGYPVIIKA AGGGGGRGMRVVHTEAALLNAVTMTKTEAGAAFGNPMVYMEKFLETPRHIEIQILADEHGNAVHLGERDCSMQRRHQKVL EEAPAPGLDPKLRDKIGERCAEACRKIGYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVTELITGIDIVQTQIRVAAGEK LPFQQKDIRFRGHAVECRINAEHPTTFVPSPGKLTNYHAAGGPGIRVDSHVYHGYYVPPHYDSMIGKLIAYGDTRDQAIA RMRGALMEMVVEGIQSNIPLHQELMNDAAFIAGGTSIHYLEHKLAGEKG >Mature_449_residues MFEKILIANRGEIALRIQRACREMGIKTVAVYSEADRDAKYVKLADESVCIGPAPSAQSYLHVPSIIAAAEVTDAAAIHP GYGFLSENADFAERVESSGFTFIGPRPDNIRLMGDKVAAKQAMIDAKVPCVPGSDGALADDPQEILKTARAIGYPVIIKA AGGGGGRGMRVVHTEAALLNAVTMTKTEAGAAFGNPMVYMEKFLETPRHIEIQILADEHGNAVHLGERDCSMQRRHQKVL EEAPAPGLDPKLRDKIGERCAEACRKIGYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVTELITGIDIVQTQIRVAAGEK LPFQQKDIRFRGHAVECRINAEHPTTFVPSPGKLTNYHAAGGPGIRVDSHVYHGYYVPPHYDSMIGKLIAYGDTRDQAIA RMRGALMEMVVEGIQSNIPLHQELMNDAAFIAGGTSIHYLEHKLAGEKG
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=443, Percent_Identity=48.7584650112867, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI65506442, Length=443, Percent_Identity=48.7584650112867, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI295821183, Length=443, Percent_Identity=48.7584650112867, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI116805327, Length=440, Percent_Identity=47.7272727272727, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=47.2035794183445, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=47.2035794183445, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=47.2035794183445, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI38679960, Length=517, Percent_Identity=31.1411992263056, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI38679974, Length=517, Percent_Identity=31.1411992263056, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI38679977, Length=517, Percent_Identity=31.1411992263056, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI38679967, Length=517, Percent_Identity=31.1411992263056, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI38679971, Length=517, Percent_Identity=31.1411992263056, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI134142062, Length=516, Percent_Identity=31.0077519379845, Blast_Score=225, Evalue=7e-59, Organism=Escherichia coli, GI1789654, Length=444, Percent_Identity=68.6936936936937, Blast_Score=627, Evalue=0.0, Organism=Escherichia coli, GI1786216, Length=248, Percent_Identity=25, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567343, Length=443, Percent_Identity=47.8555304740406, Blast_Score=412, Evalue=1e-115, Organism=Caenorhabditis elegans, GI71987519, Length=441, Percent_Identity=48.2993197278912, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17562816, Length=447, Percent_Identity=44.2953020134228, Blast_Score=357, Evalue=6e-99, Organism=Caenorhabditis elegans, GI133931226, Length=499, Percent_Identity=28.2565130260521, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71997168, Length=513, Percent_Identity=28.0701754385965, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71997163, Length=513, Percent_Identity=28.0701754385965, Blast_Score=190, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319685, Length=443, Percent_Identity=42.2121896162528, Blast_Score=350, Evalue=3e-97, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=45.8612975391499, Blast_Score=348, Evalue=1e-96, Organism=Saccharomyces cerevisiae, GI6321376, Length=448, Percent_Identity=46.4285714285714, Blast_Score=343, Evalue=4e-95, Organism=Saccharomyces cerevisiae, GI6323863, Length=463, Percent_Identity=31.7494600431965, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6324343, Length=528, Percent_Identity=29.9242424242424, Blast_Score=224, Evalue=2e-59, Organism=Drosophila melanogaster, GI281363050, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652224, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652222, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652220, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652218, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652212, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652210, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652214, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI19921944, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24652216, Length=444, Percent_Identity=47.972972972973, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24651757, Length=447, Percent_Identity=45.1901565995526, Blast_Score=385, Evalue=1e-107, Organism=Drosophila melanogaster, GI24651759, Length=410, Percent_Identity=44.390243902439, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI161076407, Length=509, Percent_Identity=29.2730844793713, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24586460, Length=509, Percent_Identity=29.2730844793713, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI161076409, Length=509, Percent_Identity=29.2730844793713, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24586458, Length=509, Percent_Identity=29.2730844793713, Blast_Score=215, Evalue=6e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 49006; Mature: 49006
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKILIANRGEIALRIQRACREMGIKTVAVYSEADRDAKYVKLADESVCIGPAPSAQSY CCCEEEEECCCCEEHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCE LHVPSIIAAAEVTDAAAIHPGYGFLSENADFAERVESSGFTFIGPRPDNIRLMGDKVAAK EECCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEECCHHHHH QAMIDAKVPCVPGSDGALADDPQEILKTARAIGYPVIIKAAGGGGGRGMRVVHTEAALLN HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEHHHHHH AVTMTKTEAGAAFGNPMVYMEKFLETPRHIEIQILADEHGNAVHLGERDCSMQRRHQKVL HHHEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHH EEAPAPGLDPKLRDKIGERCAEACRKIGYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVT HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH ELITGIDIVQTQIRVAAGEKLPFQQKDIRFRGHAVECRINAEHPTTFVPSPGKLTNYHAA HHHHHHHHHHHHHHEECCCCCCCCCCCEEECCEEEEEEEECCCCEEECCCCCCCCEEECC GGPGIRVDSHVYHGYYVPPHYDSMIGKLIAYGDTRDQAIARMRGALMEMVVEGIQSNIPL CCCCCEECCEEEECEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH HQELMNDAAFIAGGTSIHYLEHKLAGEKG HHHHHCCCEEEECCCEEEHHHHHHCCCCC >Mature Secondary Structure MFEKILIANRGEIALRIQRACREMGIKTVAVYSEADRDAKYVKLADESVCIGPAPSAQSY CCCEEEEECCCCEEHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCE LHVPSIIAAAEVTDAAAIHPGYGFLSENADFAERVESSGFTFIGPRPDNIRLMGDKVAAK EECCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEECCHHHHH QAMIDAKVPCVPGSDGALADDPQEILKTARAIGYPVIIKAAGGGGGRGMRVVHTEAALLN HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEHHHHHH AVTMTKTEAGAAFGNPMVYMEKFLETPRHIEIQILADEHGNAVHLGERDCSMQRRHQKVL HHHEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHH EEAPAPGLDPKLRDKIGERCAEACRKIGYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVT HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH ELITGIDIVQTQIRVAAGEKLPFQQKDIRFRGHAVECRINAEHPTTFVPSPGKLTNYHAA HHHHHHHHHHHHHHEECCCCCCCCCCCEEECCEEEEEEEECCCCEEECCCCCCCCEEECC GGPGIRVDSHVYHGYYVPPHYDSMIGKLIAYGDTRDQAIARMRGALMEMVVEGIQSNIPL CCCCCEECCEEEECEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH HQELMNDAAFIAGGTSIHYLEHKLAGEKG HHHHHCCCEEEECCCEEEHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9560425 [H]