| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316197
Identifier: 74316197
GI number: 74316197
Start: 191716
End: 192795
Strand: Reverse
Name: 74316197
Synonym: Tbd_0179
Alternate gene names: NA
Gene position: 192795-191716 (Counterclockwise)
Preceding gene: 74316198
Following gene: 74316196
Centisome position: 6.63
GC content: 73.7
Gene sequence:
>1080_bases GTGAGCTACCGCACCACCTGTCCGCAGTGCGCGAGCATATTCCGCCTCGGCGACGCGCAACTCGCCGCCGCGGCGGGCTG GGCGCAATGCAGCGTATGCGGTGCCAAGTTCGACGTGCGCCCGAGCCTGCGCATGGAAGACGGCTCGCCGCTGCCGAGCA CGAGCGCCGCCGCGCCGACGCCATCGGCAGCCGCGCCTCGCAGCGAAGCGCCGGCCGACGTCCCCGCTGCGCCAGCCGAG CCCGCGGACGCCGCCGCGTCGGCTCCCGCGCAAGCTGCGCCCGAGCAAGCACCTTCCGAGCTGGCGGCGGCCGAGACGCT GGCGGGCGACGAGGATCTCGCGCAAGGCATCGTCCAGCGCGAGCACGGGCACGAACTCGATTCGATCATCCTGATCGACC CCGACGCGGCGCCGCCCGACGACCCCGGTCCGCTTCCGCAGATTCCGCCTGCCGGCGCCAGCTATCCGCCGCCAGCGGCT GCGACGGCGCGCCCGGCGACGCCGACGGTAACGCGGCCGGCGACAATCGAGCCCGCGAATCCGCCCCTGCGAGCGCCGGC AGATGCCCAGCCGCCGGCTCCGCCACGCCGTCGTGCCGGAGCCCGCGCGAGAAGCCGCCGCGGGCTCCGGGCTGCGGCGA GCCTCGTGCTGTTGGCAGGCCTGCTGGCGCAAAGCGCCTTTTTTCTGCGCGACACCGTGGTCAGCCAGCTGCCGCAGACG CGTCCCGTTTTCGAACGAGTCTGCGCGACGCTCGGCTGCACGCTGGCCCTGCCGCGAAAGCTCGCGCTGCTGCAGATCGT CGGCTCGGATCTTCAGACCGAAGCGGGCGGCGGCCACCGGCTCGTGCTCACGCTCGGCAACCGCGCGGATCACGTACAGG CGTGGCCGCTTCTGGTCCTGACGCTGACCGACCAGCGCGACCGGCCGCTGTCGCGGCGAAGTTTCGCGCCGAGCGAGTAC CTCGGCGACCCCGCGCGGATCGCTGCCGGCCTCGCGCCGCGCAGCGAAGAGGCGCTGAGCCTGCCGCTTGACGTCTCCGG CCCGGCCCCGATGGGCTTCGACCTCAAGCTCGCGTACTGA
Upstream 100 bases:
>100_bases CCGAGCAGGCCGAGGATGTCATGGCGGTCTACCGGCCCTGGTTCGTTTTCGACGCGCCGGCGAGCGACGAGGGATGGGTC CGTCTGGTCGGAGTCAAGCG
Downstream 100 bases:
>100_bases AGCAGCGGCCGGGCGCTGGCTGCCGCGGCGCTTCTTCGGTATAGTGCGCGTTCCCGTTGCGGGAGAGCGCAGCCCAGCCT GCCGCCGAAGGCGTAATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc Finger/Thioredoxin
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSYRTTCPQCASIFRLGDAQLAAAAGWAQCSVCGAKFDVRPSLRMEDGSPLPSTSAAAPTPSAAAPRSEAPADVPAAPAE PADAAASAPAQAAPEQAPSELAAAETLAGDEDLAQGIVQREHGHELDSIILIDPDAAPPDDPGPLPQIPPAGASYPPPAA ATARPATPTVTRPATIEPANPPLRAPADAQPPAPPRRRAGARARSRRGLRAAASLVLLAGLLAQSAFFLRDTVVSQLPQT RPVFERVCATLGCTLALPRKLALLQIVGSDLQTEAGGGHRLVLTLGNRADHVQAWPLLVLTLTDQRDRPLSRRSFAPSEY LGDPARIAAGLAPRSEEALSLPLDVSGPAPMGFDLKLAY
Sequences:
>Translated_359_residues MSYRTTCPQCASIFRLGDAQLAAAAGWAQCSVCGAKFDVRPSLRMEDGSPLPSTSAAAPTPSAAAPRSEAPADVPAAPAE PADAAASAPAQAAPEQAPSELAAAETLAGDEDLAQGIVQREHGHELDSIILIDPDAAPPDDPGPLPQIPPAGASYPPPAA ATARPATPTVTRPATIEPANPPLRAPADAQPPAPPRRRAGARARSRRGLRAAASLVLLAGLLAQSAFFLRDTVVSQLPQT RPVFERVCATLGCTLALPRKLALLQIVGSDLQTEAGGGHRLVLTLGNRADHVQAWPLLVLTLTDQRDRPLSRRSFAPSEY LGDPARIAAGLAPRSEEALSLPLDVSGPAPMGFDLKLAY >Mature_358_residues SYRTTCPQCASIFRLGDAQLAAAAGWAQCSVCGAKFDVRPSLRMEDGSPLPSTSAAAPTPSAAAPRSEAPADVPAAPAEP ADAAASAPAQAAPEQAPSELAAAETLAGDEDLAQGIVQREHGHELDSIILIDPDAAPPDDPGPLPQIPPAGASYPPPAAA TARPATPTVTRPATIEPANPPLRAPADAQPPAPPRRRAGARARSRRGLRAAASLVLLAGLLAQSAFFLRDTVVSQLPQTR PVFERVCATLGCTLALPRKLALLQIVGSDLQTEAGGGHRLVLTLGNRADHVQAWPLLVLTLTDQRDRPLSRRSFAPSEYL GDPARIAAGLAPRSEEALSLPLDVSGPAPMGFDLKLAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37101; Mature: 36970
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRTTCPQCASIFRLGDAQLAAAAGWAQCSVCGAKFDVRPSLRMEDGSPLPSTSAAAPT CCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSAAAPRSEAPADVPAAPAEPADAAASAPAQAAPEQAPSELAAAETLAGDEDLAQGIVQR CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH EHGHELDSIILIDPDAAPPDDPGPLPQIPPAGASYPPPAAATARPATPTVTRPATIEPAN HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPLRAPADAQPPAPPRRRAGARARSRRGLRAAASLVLLAGLLAQSAFFLRDTVVSQLPQT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPVFERVCATLGCTLALPRKLALLQIVGSDLQTEAGGGHRLVLTLGNRADHVQAWPLLVL CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEECCCCCCCEECEEEEE TLTDQRDRPLSRRSFAPSEYLGDPARIAAGLAPRSEEALSLPLDVSGPAPMGFDLKLAY EECCCCCCCCHHHCCCCHHHCCCHHHHHHCCCCCCCCCEECCEECCCCCCCCCEEEECC >Mature Secondary Structure SYRTTCPQCASIFRLGDAQLAAAAGWAQCSVCGAKFDVRPSLRMEDGSPLPSTSAAAPT CCCCCCHHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSAAAPRSEAPADVPAAPAEPADAAASAPAQAAPEQAPSELAAAETLAGDEDLAQGIVQR CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH EHGHELDSIILIDPDAAPPDDPGPLPQIPPAGASYPPPAAATARPATPTVTRPATIEPAN HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPLRAPADAQPPAPPRRRAGARARSRRGLRAAASLVLLAGLLAQSAFFLRDTVVSQLPQT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPVFERVCATLGCTLALPRKLALLQIVGSDLQTEAGGGHRLVLTLGNRADHVQAWPLLVL CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEECCCCCCCEECEEEEE TLTDQRDRPLSRRSFAPSEYLGDPARIAAGLAPRSEEALSLPLDVSGPAPMGFDLKLAY EECCCCCCCCHHHCCCCHHHCCCHHHHHHCCCCCCCCCEECCEECCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA