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The map label for this gene is pqqE [H]

Identifier: 74316089

GI number: 74316089

Start: 73747

End: 74946

Strand: Reverse

Name: pqqE [H]

Synonym: Tbd_0071

Alternate gene names: 74316089

Gene position: 74946-73747 (Counterclockwise)

Preceding gene: 74316090

Following gene: 74316088

Centisome position: 2.58

GC content: 67.58

Gene sequence:

>1200_bases
ATGTTCCGCATCTCCCGATACCTGCAGGAGCTCGCCCAGCCGACCCCGCTCGGCCCCGAACGCACGCCGCCCGGCCCGGT
GGTGATCTGGAATCTGGTGCGGCGCTGCAACCTCACCTGCAAGCATTGCTATTCGATTTCCGCCGACAAGGACTTCCCGG
GCGAGCTCGGCACCGACGAGGTGTTCGCGGTGATGGACGACCTCAAGCGCTTCCGCGTGCCGGTGCTCATCCTCTCCGGC
GGCGAGCCGCTGTTGCGCCCCGACATCTACGCCATCGCGCAGCGCGCCAAGGACATGGGCTTCTACGTCGGGCTGTCGTC
GAACGGCACCCTCATCGACGAGCACAACATCGAGCGCATCGCCGCGATCGGCTTCGACTACGTCGGGGTTTCGCTCGACG
GCATCGCCGCGACCCACGACCGCTTCCGCCGCATGGACGGCGCCTTCGACGCCTCGCTGCGCGGCATCCGCCTGTGCCGC
GACCGCGGCATCAAGGTCGGCATCCGCTTCACCCTGACCCAGGACAATGCGCAGGACCTGCCCGCGCTGCTGCAGCTGAT
GGAGGACGAGCGGCTCGACAAGTTCTACCTCTCGCACCTCAACTACGCCGGCCGCGGCAACACCAACCGCAAGCACGACG
TGGTGCACCAGGCCACCCGCCAGGCCATGGACCTCTTGTTCGACACTTGCTGGCGCTACCAGCAGGCCGGGCTGCACAAG
GAGTTCGTCACCGGCAACAACGACGCCGACGGCGTCTACCTGCTGTTCTGGATCCGCCGCCACTTCCCCGCGATGGAAGG
CCACATGCGCGCCAAGCTCGCGCAGTGGGGCGGCAATTCCAGCGGGGTCAACATCGCCAACATCGACAACCTCGGCAACG
TGCACCCGGACACCTTCTGGTGGAACTACAGCCTCGGCAACGTCAAGGAGCGGCCGTTCTCGGAAATCTGGCCCGATACC
AGCGATCCGCTGATGGCCGGGCTCAAGGCCAGCCCGCGCGCGGTCAAGGGGCGCTGCGGCGAATGCGCCTACTTCGACAT
CTGCGGCGGCAACACCCGGGTGCGCGCCTACCAGCTCACCGGCGACCCCTGGCAGGAGGACCCCGCCTGCTACCTCGACG
ACGAGGAGATCGGGGTCACCACACCGCACGAGCGGCTGACCGTGACGCCCTATGTGCCGCTGCGGCGGGTGGCGCGCTGA

Upstream 100 bases:

>100_bases
GCCGACGCGTTGGGTACGGCGAGCCGCGCGCGCGACATCCTGTACAGTACGCGCATCCTCAAGAAAACCGGCCTGCGCAT
CGGCGCATAGGAGAAAAGAC

Downstream 100 bases:

>100_bases
TGCAGCACTTTTCCCGCCTCTGCATGCTTGCCGCCGCCCTGCTGGCAAGCTCGCCCGCGTCCGCCGCCGAACCGGTGCCC
GCGGTCTACGCCCGACACTG

Product: Elongator protein 3/MiaB/NifB

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MFRISRYLQELAQPTPLGPERTPPGPVVIWNLVRRCNLTCKHCYSISADKDFPGELGTDEVFAVMDDLKRFRVPVLILSG
GEPLLRPDIYAIAQRAKDMGFYVGLSSNGTLIDEHNIERIAAIGFDYVGVSLDGIAATHDRFRRMDGAFDASLRGIRLCR
DRGIKVGIRFTLTQDNAQDLPALLQLMEDERLDKFYLSHLNYAGRGNTNRKHDVVHQATRQAMDLLFDTCWRYQQAGLHK
EFVTGNNDADGVYLLFWIRRHFPAMEGHMRAKLAQWGGNSSGVNIANIDNLGNVHPDTFWWNYSLGNVKERPFSEIWPDT
SDPLMAGLKASPRAVKGRCGECAYFDICGGNTRVRAYQLTGDPWQEDPACYLDDEEIGVTTPHERLTVTPYVPLRRVAR

Sequences:

>Translated_399_residues
MFRISRYLQELAQPTPLGPERTPPGPVVIWNLVRRCNLTCKHCYSISADKDFPGELGTDEVFAVMDDLKRFRVPVLILSG
GEPLLRPDIYAIAQRAKDMGFYVGLSSNGTLIDEHNIERIAAIGFDYVGVSLDGIAATHDRFRRMDGAFDASLRGIRLCR
DRGIKVGIRFTLTQDNAQDLPALLQLMEDERLDKFYLSHLNYAGRGNTNRKHDVVHQATRQAMDLLFDTCWRYQQAGLHK
EFVTGNNDADGVYLLFWIRRHFPAMEGHMRAKLAQWGGNSSGVNIANIDNLGNVHPDTFWWNYSLGNVKERPFSEIWPDT
SDPLMAGLKASPRAVKGRCGECAYFDICGGNTRVRAYQLTGDPWQEDPACYLDDEEIGVTTPHERLTVTPYVPLRRVAR
>Mature_399_residues
MFRISRYLQELAQPTPLGPERTPPGPVVIWNLVRRCNLTCKHCYSISADKDFPGELGTDEVFAVMDDLKRFRVPVLILSG
GEPLLRPDIYAIAQRAKDMGFYVGLSSNGTLIDEHNIERIAAIGFDYVGVSLDGIAATHDRFRRMDGAFDASLRGIRLCR
DRGIKVGIRFTLTQDNAQDLPALLQLMEDERLDKFYLSHLNYAGRGNTNRKHDVVHQATRQAMDLLFDTCWRYQQAGLHK
EFVTGNNDADGVYLLFWIRRHFPAMEGHMRAKLAQWGGNSSGVNIANIDNLGNVHPDTFWWNYSLGNVKERPFSEIWPDT
SDPLMAGLKASPRAVKGRCGECAYFDICGGNTRVRAYQLTGDPWQEDPACYLDDEEIGVTTPHERLTVTPYVPLRRVAR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45123; Mature: 45123

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00126 PDEASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRISRYLQELAQPTPLGPERTPPGPVVIWNLVRRCNLTCKHCYSISADKDFPGELGTDE
CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHH
VFAVMDDLKRFRVPVLILSGGEPLLRPDIYAIAQRAKDMGFYVGLSSNGTLIDEHNIERI
HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCCCHHH
AAIGFDYVGVSLDGIAATHDRFRRMDGAFDASLRGIRLCRDRGIKVGIRFTLTQDNAQDL
HHHCCCEECEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHH
PALLQLMEDERLDKFYLSHLNYAGRGNTNRKHDVVHQATRQAMDLLFDTCWRYQQAGLHK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EFVTGNNDADGVYLLFWIRRHFPAMEGHMRAKLAQWGGNSSGVNIANIDNLGNVHPDTFW
HHCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEE
WNYSLGNVKERPFSEIWPDTSDPLMAGLKASPRAVKGRCGECAYFDICGGNTRVRAYQLT
EECCCCCCCCCCHHHHCCCCCCHHHHCCCCCCHHHCCCCCCEEEEEEECCCCEEEEEEEC
GDPWQEDPACYLDDEEIGVTTPHERLTVTPYVPLRRVAR
CCCCCCCCCEEECCCCCCCCCCCCCEEECCCHHHHHHCC
>Mature Secondary Structure
MFRISRYLQELAQPTPLGPERTPPGPVVIWNLVRRCNLTCKHCYSISADKDFPGELGTDE
CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHH
VFAVMDDLKRFRVPVLILSGGEPLLRPDIYAIAQRAKDMGFYVGLSSNGTLIDEHNIERI
HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCCCHHH
AAIGFDYVGVSLDGIAATHDRFRRMDGAFDASLRGIRLCRDRGIKVGIRFTLTQDNAQDL
HHHCCCEECEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHH
PALLQLMEDERLDKFYLSHLNYAGRGNTNRKHDVVHQATRQAMDLLFDTCWRYQQAGLHK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EFVTGNNDADGVYLLFWIRRHFPAMEGHMRAKLAQWGGNSSGVNIANIDNLGNVHPDTFW
HHCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEE
WNYSLGNVKERPFSEIWPDTSDPLMAGLKASPRAVKGRCGECAYFDICGGNTRVRAYQLT
EECCCCCCCCCCHHHHCCCCCCHHHHCCCCCCHHHCCCCCCEEEEEEECCCCEEEEEEEC
GDPWQEDPACYLDDEEIGVTTPHERLTVTPYVPLRRVAR
CCCCCCCCCEEECCCCCCCCCCCCCEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11111029 [H]