Click here to switch to the map view.

The map label for this gene is smg

Identifier: 74316029

GI number: 74316029

Start: 11542

End: 11988

Strand: Reverse

Name: smg

Synonym: Tbd_0011

Alternate gene names: 74316029

Gene position: 11988-11542 (Counterclockwise)

Preceding gene: 74316030

Following gene: 74316028

Centisome position: 0.41

GC content: 64.65

Gene sequence:

>447_bases
ATGCTCGACATCCTCGTCTACCTCTACGAAAGCTTCCGCATGGCGGAGCTCGCGCCCGACCGCGACGCTCTCGAAAAGCG
CCTGTTCGCCGCGGGGTTCGAGGAGGCGCACATCAACGCCACGCTCGACTGGTTCGCCAACCTCACGAGCAGCGCGGCGC
ACGACCGGCTGGCCTACGCCCAGTATCGGCACTACGCGCCCGAGGAGCTCGAAAGCCTCAACGACGCCTGCCGCGAGGAA
ATCAGCTATCTGGTCGGCGCCGAGATTCTCGACCCCGAGTCGCGCGAGTGGGTGATTTCGGGGCTGATGGCGCTGGCTGG
CGAGGACATCGAGCCCGATCACGTGCGCTGGATGACGCTGATCGTGCTGTGGAGCCGCGGGCTGATCGAACATTTCACCC
ACCTCGAAGAGATGCTGCTGAACCATGAGCCGGGACGCCTGCACTAA

Upstream 100 bases:

>100_bases
TTGACGCTAGATGCGCTTTCCGCCAAGCTGTTGGCGCTCGAACTGGACGGTCGCATCGCGGCCCTGCCCGGCGGGCGTTA
CCAGAAAATTCACTGACATC

Downstream 100 bases:

>100_bases
GCCGACATGTCCAAGCTCGTCATCGTCGAATCGCCGTCGAAGTCCAAGTCGCTGAAGAAATACCTCGGCGCGGACTACGA
CATCCTCGCCAGCTACGGCC

Product: Smg protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLDILVYLYESFRMAELAPDRDALEKRLFAAGFEEAHINATLDWFANLTSSAAHDRLAYAQYRHYAPEELESLNDACREE
ISYLVGAEILDPESREWVISGLMALAGEDIEPDHVRWMTLIVLWSRGLIEHFTHLEEMLLNHEPGRLH

Sequences:

>Translated_148_residues
MLDILVYLYESFRMAELAPDRDALEKRLFAAGFEEAHINATLDWFANLTSSAAHDRLAYAQYRHYAPEELESLNDACREE
ISYLVGAEILDPESREWVISGLMALAGEDIEPDHVRWMTLIVLWSRGLIEHFTHLEEMLLNHEPGRLH
>Mature_148_residues
MLDILVYLYESFRMAELAPDRDALEKRLFAAGFEEAHINATLDWFANLTSSAAHDRLAYAQYRHYAPEELESLNDACREE
ISYLVGAEILDPESREWVISGLMALAGEDIEPDHVRWMTLIVLWSRGLIEHFTHLEEMLLNHEPGRLH

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family

Homologues:

Organism=Escherichia coli, GI1789679, Length=160, Percent_Identity=35, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMG_THIDA (Q3SMS6)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_313769.1
- STRING:   Q3SMS6
- GeneID:   3673846
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_0011
- NMPDR:   fig|292415.3.peg.671
- eggNOG:   COG2922
- HOGENOM:   HBG518884
- PhylomeDB:   Q3SMS6
- BioCyc:   TDEN292415:TBD_0011-MONOMER
- HAMAP:   MF_00598
- InterPro:   IPR007456

Pfam domain/function: PF04361 DUF494

EC number: NA

Molecular weight: Translated: 17126; Mature: 17126

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDILVYLYESFRMAELAPDRDALEKRLFAAGFEEAHINATLDWFANLTSSAAHDRLAYA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QYRHYAPEELESLNDACREEISYLVGAEILDPESREWVISGLMALAGEDIEPDHVRWMTL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
IVLWSRGLIEHFTHLEEMLLNHEPGRLH
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLDILVYLYESFRMAELAPDRDALEKRLFAAGFEEAHINATLDWFANLTSSAAHDRLAYA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QYRHYAPEELESLNDACREEISYLVGAEILDPESREWVISGLMALAGEDIEPDHVRWMTL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
IVLWSRGLIEHFTHLEEMLLNHEPGRLH
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA