| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73543128
Identifier: 73543128
GI number: 73543128
Start: 3790622
End: 3791629
Strand: Reverse
Name: 73543128
Synonym: Reut_A3446
Alternate gene names: NA
Gene position: 3791629-3790622 (Counterclockwise)
Preceding gene: 73543132
Following gene: 73543127
Centisome position: 99.61
GC content: 67.36
Gene sequence:
>1008_bases TTGCAAGGGGTTCATCGCAGTACAAAGAGACTCGCCCCCATGAAGACCGGCAAAAGCACGGCAGGAGACACCAAGGCTCG CATTCTCGACGCCACGGAAAAGTTGTTCATCGAGGTCGGCTACGAAGCCACCTCACTGAGGCAAGTCACGTCCCGCGCCA TGGTCAATCTGGCCGCCGTGAACTACCACTTCGGCAGCAAGGACATCATGATGCAGGCCGTGCTCGGCCGGCGCCTGGGT CCGCTCAACGCACGCCGCCTGGCGCTGCTGGATGCCTGCGAAGCGCATTGGCCCGGCCACCGCATCCGCTGCGAGCACGT GATGGGCGCGCTGTTCGTGCCCGCGCTGCAGATGGCGCGCAATTCGGCCGTGGGCGGCCCGTCATTCCTGCGCCTGCTCG GACGCGTGCACGCCGACACCTCGCCCTTCATCCAGTCTTACCTGATGGAGCATTGCGCGACGGTGTACAAGCGCTTCTTC GATGCGTTCTCGCGCGCATTGCCCGAGCAGCCGCGCCATGAACTGGGCTGGCGGCTGCAGTTCTCGCTCAAGGCCCTGGC CGGCGTACTGGCCAGCGACGACATTTCCAACCTCATGTCCGCCTTTGCTCAGGGCCGACCGCTGAGCGACGCGCACATGC TGGCCCAACTCACCGCCATGGTCATGGCCGCGTTGCGGGTCCCCGCACCCGGCAGCGAGCAGCGGGCGTCGCTGCAATCG GTGTTCGACCTCGACGACGCCAACGAGGCGATGCAGCGGGCCCAAGCACAGGGGCGCGAAACGGCGGCGGCAGCGGCGAT AGCGGCAGCCAATGCCGTCGCCAACGCAGACGCCGGCCATCGCGCGGAAGCTGCTGCCGCCAAGCCGCGACAGGGCGCAC GCGCCGCGCGCAACGAAGGCACCGCCCGTGCAGCCATCGCGAGTGTCCCTGTCCGTGCGCGCGAGCCGGCGGTGACGTTC CCCAGCAATCCGCTGGATGACTGGATGCGAATGCGCGCCCGGACATAG
Upstream 100 bases:
>100_bases TCCACGCTTGTGAAACGCCCGAACGCGTGGGATACGCTTCATTCACCTGTTTCAAGCATCCGTATGCCGACAGAGCACGG AGTAAAACCAGGGTAGTCGA
Downstream 100 bases:
>100_bases CGGCTCCCGGACGCGGTGACCGTTCCGAACTGAAGCGGCCGTTTCCCGCGCGTCAAGCGCGCGTGGGACACCTACGGCTG CATCGCGAAAAAGATCCTGT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Regulatory Protein TetR; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MQGVHRSTKRLAPMKTGKSTAGDTKARILDATEKLFIEVGYEATSLRQVTSRAMVNLAAVNYHFGSKDIMMQAVLGRRLG PLNARRLALLDACEAHWPGHRIRCEHVMGALFVPALQMARNSAVGGPSFLRLLGRVHADTSPFIQSYLMEHCATVYKRFF DAFSRALPEQPRHELGWRLQFSLKALAGVLASDDISNLMSAFAQGRPLSDAHMLAQLTAMVMAALRVPAPGSEQRASLQS VFDLDDANEAMQRAQAQGRETAAAAAIAAANAVANADAGHRAEAAAAKPRQGARAARNEGTARAAIASVPVRAREPAVTF PSNPLDDWMRMRART
Sequences:
>Translated_335_residues MQGVHRSTKRLAPMKTGKSTAGDTKARILDATEKLFIEVGYEATSLRQVTSRAMVNLAAVNYHFGSKDIMMQAVLGRRLG PLNARRLALLDACEAHWPGHRIRCEHVMGALFVPALQMARNSAVGGPSFLRLLGRVHADTSPFIQSYLMEHCATVYKRFF DAFSRALPEQPRHELGWRLQFSLKALAGVLASDDISNLMSAFAQGRPLSDAHMLAQLTAMVMAALRVPAPGSEQRASLQS VFDLDDANEAMQRAQAQGRETAAAAAIAAANAVANADAGHRAEAAAAKPRQGARAARNEGTARAAIASVPVRAREPAVTF PSNPLDDWMRMRART >Mature_335_residues MQGVHRSTKRLAPMKTGKSTAGDTKARILDATEKLFIEVGYEATSLRQVTSRAMVNLAAVNYHFGSKDIMMQAVLGRRLG PLNARRLALLDACEAHWPGHRIRCEHVMGALFVPALQMARNSAVGGPSFLRLLGRVHADTSPFIQSYLMEHCATVYKRFF DAFSRALPEQPRHELGWRLQFSLKALAGVLASDDISNLMSAFAQGRPLSDAHMLAQLTAMVMAALRVPAPGSEQRASLQS VFDLDDANEAMQRAQAQGRETAAAAAIAAANAVANADAGHRAEAAAAKPRQGARAARNEGTARAAIASVPVRAREPAVTF PSNPLDDWMRMRART
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36247; Mature: 36247
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGVHRSTKRLAPMKTGKSTAGDTKARILDATEKLFIEVGYEATSLRQVTSRAMVNLAAV CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NYHFGSKDIMMQAVLGRRLGPLNARRLALLDACEAHWPGHRIRCEHVMGALFVPALQMAR EECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHH NSAVGGPSFLRLLGRVHADTSPFIQSYLMEHCATVYKRFFDAFSRALPEQPRHELGWRLQ CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHH FSLKALAGVLASDDISNLMSAFAQGRPLSDAHMLAQLTAMVMAALRVPAPGSEQRASLQS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VFDLDDANEAMQRAQAQGRETAAAAAIAAANAVANADAGHRAEAAAAKPRQGARAARNEG HHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCC TARAAIASVPVRAREPAVTFPSNPLDDWMRMRART HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MQGVHRSTKRLAPMKTGKSTAGDTKARILDATEKLFIEVGYEATSLRQVTSRAMVNLAAV CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NYHFGSKDIMMQAVLGRRLGPLNARRLALLDACEAHWPGHRIRCEHVMGALFVPALQMAR EECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHH NSAVGGPSFLRLLGRVHADTSPFIQSYLMEHCATVYKRFFDAFSRALPEQPRHELGWRLQ CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHH FSLKALAGVLASDDISNLMSAFAQGRPLSDAHMLAQLTAMVMAALRVPAPGSEQRASLQS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VFDLDDANEAMQRAQAQGRETAAAAAIAAANAVANADAGHRAEAAAAKPRQGARAARNEG HHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCC TARAAIASVPVRAREPAVTFPSNPLDDWMRMRART HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA