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The map label for this gene is ompW [H]

Identifier: 73543125

GI number: 73543125

Start: 3786666

End: 3787514

Strand: Reverse

Name: ompW [H]

Synonym: Reut_A3443

Alternate gene names: 73543125

Gene position: 3787514-3786666 (Counterclockwise)

Preceding gene: 73543126

Following gene: 73543121

Centisome position: 99.5

GC content: 62.19

Gene sequence:

>849_bases
ATGCAAGCCATTCACAAGCGCTTCATCATCCTTGCGACAACCTGCGCCGCGCTGACGCTGGCGAGCGCGCCGGCCCACGC
GCAAAAGGTCGGCGACAACGTCGTCACCGCGGGCTGGTTCAACGTCCAGACCAGCGGCCACAGCGACCCGCTCACCACGT
CGGTGGCGCAGGTGCCGATCAACTATCCGCTTGGCCTGCCATCCACATTCAGCGCACCAGGCAGCAGCCTCTCGACGTCC
AATGCCAATACGGTCGGCTTCACCTTCAGCCATTTCTTCACCGACCATATCGCACTGACCGCGGTCGGCGGCATTCCGCC
GGAGTTCAGGATTTACGGCCATGGAGAACTGATTCCGCCAGGTCCGGCCGGGGCGCTGGGCCGGCAGAGCCTGGGCGACC
CGGCGCTCAACCCGATCATCACCAAGGCACGCCAGTGGAGCCCAGCCGCCATGGTGCAATACCACTTCCTGGCGCCAACC
GCGAGCTTCCGGCCGTTCGTCGGGCTGGGGCTTTCGTACAACTTCTATACCAACATCGAAGTGAACCCTGCCTTTTCCGC
TTCGGTCAACAGCAACCTCGGCGCGATCCTTGCCGCTGGCGCAGAGATCCCTGGACCGACCTCCGTGCATGCAGACGCGT
CGTCGTCGTGGGCACCGGTGTTCAACGTGGGGGGCACGTACAACTTCAATGAACACTGGGGGCTGACGGCATCGGTCACC
TATATCCCGCTGTCGACGACGTCGACGATGACGATCAAGGCGTCGGATGGGACGGTGTTGTCGACGTCAAAAACGAAGCT
GGAGCCGAATCCCATTGTGTTTTATCTGGCGGCGTCTTACAGGTTTTGA

Upstream 100 bases:

>100_bases
GCTTCCTGGAATCGCGCAGCAGCGGCCCGTACTTCACGGTCGGGGCCTTCGTGCAATAAGCGGCATGGACGCAACCTATT
CGATCGACCGGGGACACCAT

Downstream 100 bases:

>100_bases
GGGGTCAAGAGCGGTCTTCGCCGAAGTGCGGCGGGTATCGTTCTTCGGCAAGAAGCTTAAAAAAAAACGGCGCACCACAG
TGCGCCGTTCCTGAACCGAC

Product: OmpW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MQAIHKRFIILATTCAALTLASAPAHAQKVGDNVVTAGWFNVQTSGHSDPLTTSVAQVPINYPLGLPSTFSAPGSSLSTS
NANTVGFTFSHFFTDHIALTAVGGIPPEFRIYGHGELIPPGPAGALGRQSLGDPALNPIITKARQWSPAAMVQYHFLAPT
ASFRPFVGLGLSYNFYTNIEVNPAFSASVNSNLGAILAAGAEIPGPTSVHADASSSWAPVFNVGGTYNFNEHWGLTASVT
YIPLSTTSTMTIKASDGTVLSTSKTKLEPNPIVFYLAASYRF

Sequences:

>Translated_282_residues
MQAIHKRFIILATTCAALTLASAPAHAQKVGDNVVTAGWFNVQTSGHSDPLTTSVAQVPINYPLGLPSTFSAPGSSLSTS
NANTVGFTFSHFFTDHIALTAVGGIPPEFRIYGHGELIPPGPAGALGRQSLGDPALNPIITKARQWSPAAMVQYHFLAPT
ASFRPFVGLGLSYNFYTNIEVNPAFSASVNSNLGAILAAGAEIPGPTSVHADASSSWAPVFNVGGTYNFNEHWGLTASVT
YIPLSTTSTMTIKASDGTVLSTSKTKLEPNPIVFYLAASYRF
>Mature_282_residues
MQAIHKRFIILATTCAALTLASAPAHAQKVGDNVVTAGWFNVQTSGHSDPLTTSVAQVPINYPLGLPSTFSAPGSSLSTS
NANTVGFTFSHFFTDHIALTAVGGIPPEFRIYGHGELIPPGPAGALGRQSLGDPALNPIITKARQWSPAAMVQYHFLAPT
ASFRPFVGLGLSYNFYTNIEVNPAFSASVNSNLGAILAAGAEIPGPTSVHADASSSWAPVFNVGGTYNFNEHWGLTASVT
YIPLSTTSTMTIKASDGTVLSTSKTKLEPNPIVFYLAASYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 29618; Mature: 29618

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIHKRFIILATTCAALTLASAPAHAQKVGDNVVTAGWFNVQTSGHSDPLTTSVAQVPI
CCCHHHEEEEEEEHHHHHHHHCCCHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEEEEEE
NYPLGLPSTFSAPGSSLSTSNANTVGFTFSHFFTDHIALTAVGGIPPEFRIYGHGELIPP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCEEEEEECCCCCCEEEEECCCEECC
GPAGALGRQSLGDPALNPIITKARQWSPAAMVQYHFLAPTASFRPFVGLGLSYNFYTNIE
CCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEEEEECCCCCCCCEEECCEEEEEEEEEE
VNPAFSASVNSNLGAILAAGAEIPGPTSVHADASSSWAPVFNVGGTYNFNEHWGLTASVT
ECCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCCEECCCCCCCEEEEEE
YIPLSTTSTMTIKASDGTVLSTSKTKLEPNPIVFYLAASYRF
EEEECCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MQAIHKRFIILATTCAALTLASAPAHAQKVGDNVVTAGWFNVQTSGHSDPLTTSVAQVPI
CCCHHHEEEEEEEHHHHHHHHCCCHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEEEEEE
NYPLGLPSTFSAPGSSLSTSNANTVGFTFSHFFTDHIALTAVGGIPPEFRIYGHGELIPP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCEEEEEECCCCCCEEEEECCCEECC
GPAGALGRQSLGDPALNPIITKARQWSPAAMVQYHFLAPTASFRPFVGLGLSYNFYTNIE
CCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEEEEECCCCCCCCEEECCEEEEEEEEEE
VNPAFSASVNSNLGAILAAGAEIPGPTSVHADASSSWAPVFNVGGTYNFNEHWGLTASVT
ECCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCCEECCCCCCCEEEEEE
YIPLSTTSTMTIKASDGTVLSTSKTKLEPNPIVFYLAASYRF
EEEECCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]