Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 73543036

GI number: 73543036

Start: 3671082

End: 3671984

Strand: Reverse

Name: parB [H]

Synonym: Reut_A3354

Alternate gene names: 73543036

Gene position: 3671984-3671082 (Counterclockwise)

Preceding gene: 73543037

Following gene: 73543035

Centisome position: 96.47

GC content: 63.79

Gene sequence:

>903_bases
ATGAGCACCGTGAAGAAGAAGGGTCTTGGCCGCGGCCTGGAAGCCCTGCTCGGCGGCCCGGCCGAGATCGTCGAAACCGC
GAAGCAGGAGGGCGCGCCCACCGTGCTGCGGCTCGATCAGCTTCAACCCGGCAAGTACCAGCCGCGCACGCGCATGGACG
AGGGCGCTCTGCAAGAGCTCGCTGCAAGCATCCGTGCGCAAGGCCTGATGCAGCCGATCCTGGTGCGGCGCGTGGCCGAG
CCTGATCGCTACGAGATCATTGCGGGCGAACGCCGTTTCCGCGCTTCGCGACTCGCCGGTCTCGACAAGGTGCCGGTGCT
GGTGAAGGAGGTTGCCGACGAAGCCGCGGCGGCCATGGCGCTGATCGAAAACATCCAGCGCGAAGACCTGAATCCGCTCG
AAGAAGCGCAAGGCATCATGCGCCTGATCCGCGAATTCCAGTTTACGCACGAGCAGGCGGCCGAGTCGGTGGGCCGCTCT
CGCAGCGCAGTGTCGAACCTGCTCCGCCTGCTGAACCTGGCCGCGCCGGTGCAGACCATGCTGATGGCAGGCGATCTCGA
TATGGGACATGCGCGTGCACTCCTGGCGCTCGACGGCGCGAATCAGATCACGCTGGCCAACCAGATCGTCAACAAGCGGC
TATCAGTGCGCGAGACCGAGAAGCTTGTTGCTGCTACGCTGAAGCCGTTCGAACTGAAGTCCCTCAAGCACAAGACCGGC
AATGGCATGCGCGATGTCGCACGGCTGGAAGAAGAATTGTCGGATGCGCTGGGATTGTCAGTGCAGATCAAGGTGGGTGC
GCGCGGCAAGGGCCAGCTCACCATTCACTTCAGCAATAACGAAGCGCTCGACGATGTGCTCGAGCGTCTGCGCGATGCAG
GCGAAGGGCAACGGGTCGCGTAA

Upstream 100 bases:

>100_bases
AGGGCGCCAAGGCTTATCTCGACTTCGGCGCCGAGATGATCGCCCGTGTCAGGCAGCTGTCGGCGCCGGAAGCTGCCACC
GCGTTGCAAGGACAGTGACC

Downstream 100 bases:

>100_bases
ACGACTCACGCCGACTCCACGCAAAAAGCTGCGCGATAAACGGCCACTTGCATGCGCACTGTTGCATTCACGCAGCAGTT
AACAGTCCGACATCCGGTTA

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSTVKKKGLGRGLEALLGGPAEIVETAKQEGAPTVLRLDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRRVAE
PDRYEIIAGERRFRASRLAGLDKVPVLVKEVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFQFTHEQAAESVGRS
RSAVSNLLRLLNLAAPVQTMLMAGDLDMGHARALLALDGANQITLANQIVNKRLSVRETEKLVAATLKPFELKSLKHKTG
NGMRDVARLEEELSDALGLSVQIKVGARGKGQLTIHFSNNEALDDVLERLRDAGEGQRVA

Sequences:

>Translated_300_residues
MSTVKKKGLGRGLEALLGGPAEIVETAKQEGAPTVLRLDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRRVAE
PDRYEIIAGERRFRASRLAGLDKVPVLVKEVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFQFTHEQAAESVGRS
RSAVSNLLRLLNLAAPVQTMLMAGDLDMGHARALLALDGANQITLANQIVNKRLSVRETEKLVAATLKPFELKSLKHKTG
NGMRDVARLEEELSDALGLSVQIKVGARGKGQLTIHFSNNEALDDVLERLRDAGEGQRVA
>Mature_299_residues
STVKKKGLGRGLEALLGGPAEIVETAKQEGAPTVLRLDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRRVAEP
DRYEIIAGERRFRASRLAGLDKVPVLVKEVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFQFTHEQAAESVGRSR
SAVSNLLRLLNLAAPVQTMLMAGDLDMGHARALLALDGANQITLANQIVNKRLSVRETEKLVAATLKPFELKSLKHKTGN
GMRDVARLEEELSDALGLSVQIKVGARGKGQLTIHFSNNEALDDVLERLRDAGEGQRVA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32771; Mature: 32640

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVKKKGLGRGLEALLGGPAEIVETAKQEGAPTVLRLDQLQPGKYQPRTRMDEGALQEL
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AASIRAQGLMQPILVRRVAEPDRYEIIAGERRFRASRLAGLDKVPVLVKEVADEAAAAMA
HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LIENIQREDLNPLEEAQGIMRLIREFQFTHEQAAESVGRSRSAVSNLLRLLNLAAPVQTM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LMAGDLDMGHARALLALDGANQITLANQIVNKRLSVRETEKLVAATLKPFELKSLKHKTG
HHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
NGMRDVARLEEELSDALGLSVQIKVGARGKGQLTIHFSNNEALDDVLERLRDAGEGQRVA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STVKKKGLGRGLEALLGGPAEIVETAKQEGAPTVLRLDQLQPGKYQPRTRMDEGALQEL
CCCHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AASIRAQGLMQPILVRRVAEPDRYEIIAGERRFRASRLAGLDKVPVLVKEVADEAAAAMA
HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LIENIQREDLNPLEEAQGIMRLIREFQFTHEQAAESVGRSRSAVSNLLRLLNLAAPVQTM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LMAGDLDMGHARALLALDGANQITLANQIVNKRLSVRETEKLVAATLKPFELKSLKHKTG
HHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
NGMRDVARLEEELSDALGLSVQIKVGARGKGQLTIHFSNNEALDDVLERLRDAGEGQRVA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]