| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is speH [H]
Identifier: 73542983
GI number: 73542983
Start: 3609186
End: 3609611
Strand: Reverse
Name: speH [H]
Synonym: Reut_A3300
Alternate gene names: 73542983
Gene position: 3609611-3609186 (Counterclockwise)
Preceding gene: 73542984
Following gene: 73542982
Centisome position: 94.83
GC content: 68.31
Gene sequence:
>426_bases GTGGCAGCTGGTCGTCGGGCGGTGGGCACAAGTGAGGCCGGCATCGTGAATGCGCCCCCGCTGCCGTGCCCGGCCGTGCT TGGCCGCCACCTGCTGCTTGACCTGCAGGGTGTCGCACCAGACCTGCTGACCGATGCGGCGCTGGTCGAACGTGTGCTGT ATGGCGCAGCGCACGTGGCCGGGGCAACGCCAGTGGATGCACGCTTCCAGCATTTCGGGCCCGGGCTTGGCGTCACGGGC GTGCTGCTGCTCAAGGAATCGCATATCAGCATCCATACGTGGCCCGAGTACGGCTTCGCGGCTGTGGATATCTTCATGTG CGGCACGGCCCGCCCGGAGATGGCCGCGCAGCATATCCGCGCAGCGCTTGCACCGCGCACGATGACGCTGCGCGATGAAG CCCGCGGTATCGCCGGGTGCCGCTGA
Upstream 100 bases:
>100_bases ATCGTGCTGTTCGGCGCGACGTTCTACAACCTCGGTTCCGGCACGGACTCCCGTTCCGGCGGCTCGGGGGCCGGCCGCAT GTGGGGCGGCGGCAGCGGCG
Downstream 100 bases:
>100_bases CGCCGCCCCGGCAAACGATTCGCTTCTGCGCTACACTGCGTTGAACCCCGTAGTCACTACAGAGATTCCAGCACCATGCG AATCGGCGAACTCTCCCGGC
Product: S-adenosylmethionine decarboxylase related
Products: NA
Alternate protein names: AdoMetDC; SAMDC [H]
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAAGRRAVGTSEAGIVNAPPLPCPAVLGRHLLLDLQGVAPDLLTDAALVERVLYGAAHVAGATPVDARFQHFGPGLGVTG VLLLKESHISIHTWPEYGFAAVDIFMCGTARPEMAAQHIRAALAPRTMTLRDEARGIAGCR
Sequences:
>Translated_141_residues MAAGRRAVGTSEAGIVNAPPLPCPAVLGRHLLLDLQGVAPDLLTDAALVERVLYGAAHVAGATPVDARFQHFGPGLGVTG VLLLKESHISIHTWPEYGFAAVDIFMCGTARPEMAAQHIRAALAPRTMTLRDEARGIAGCR >Mature_140_residues AAGRRAVGTSEAGIVNAPPLPCPAVLGRHLLLDLQGVAPDLLTDAALVERVLYGAAHVAGATPVDARFQHFGPGLGVTGV LLLKESHISIHTWPEYGFAAVDIFMCGTARPEMAAQHIRAALAPRTMTLRDEARGIAGCR
Specific function: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine [H]
COG id: COG1586
COG function: function code E; S-adenosylmethionine decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003826 - InterPro: IPR016067 - InterPro: IPR017716 [H]
Pfam domain/function: PF02675 AdoMet_dc [H]
EC number: =4.1.1.50 [H]
Molecular weight: Translated: 14769; Mature: 14638
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGRRAVGTSEAGIVNAPPLPCPAVLGRHLLLDLQGVAPDLLTDAALVERVLYGAAHVA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC GATPVDARFQHFGPGLGVTGVLLLKESHISIHTWPEYGFAAVDIFMCGTARPEMAAQHIR CCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHEEEEEECCCCCHHHHHHHHH AALAPRTMTLRDEARGIAGCR HHHCCCCEEEHHHHCCCCCCC >Mature Secondary Structure AAGRRAVGTSEAGIVNAPPLPCPAVLGRHLLLDLQGVAPDLLTDAALVERVLYGAAHVA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC GATPVDARFQHFGPGLGVTGVLLLKESHISIHTWPEYGFAAVDIFMCGTARPEMAAQHIR CCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHEEEEEECCCCCHHHHHHHHH AALAPRTMTLRDEARGIAGCR HHHCCCCEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA