| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is xcpX [H]
Identifier: 73542909
GI number: 73542909
Start: 3535343
End: 3536356
Strand: Direct
Name: xcpX [H]
Synonym: Reut_A3225
Alternate gene names: 73542909
Gene position: 3535343-3536356 (Clockwise)
Preceding gene: 73542908
Following gene: 73542910
Centisome position: 92.88
GC content: 69.72
Gene sequence:
>1014_bases ATGCGCCGACGCCTCCCGCCCCTGTCCCGACGCCGCATGCGTGGCGCCGCCGTGGTCACGGCGCTGCTGATGGTCACGCT CGCCGTGGTCATTGTCTCCGGCATGCTGTGGCGCCAGCAGGTGCAGATCCGATCGATCGAGAACCAGCGGCTGCTCGCTC AGGCCACGTGGGTCGAGCGCGCGGCCGTGGACTGGGCCCGGCTCATCCTGCGCGACGACCAGCGCCGCACCAGCGTCGAC GAACTGGGCGAGCCGTGGGCCGTGCCGATCGCAGAGACGCGCCTGTCGGATTTCCTGGGCGCCGCGCTGCGCACCGACCA GGCCGGCGAGACATCGTTCCTGTCGGGCCGCATCCTGGACGCGCAGGCGCGCTTCAACCTGACCAACCTGGTGCTGTGGA CGGCCACGCCGACGCAGGGCCGCGCCGCCACGGTCGATCCGGCCGCGCTGGCAGCATACCGCCGCCTGCTGCAAACCGTG GGCCTGAATCCGTCGCTGGCCGAGACCACGGGACGCTTCATGCTGCGCGCCGCGCAAGGCGGCTCTGACGGCCAGCCGGC GCCGCGCCCGCCGGACAGCGCCCAGAGCCTGCTGGCAATCCCGGGCTACACGCCCGAGATGGTCACGGCGCTGGAACCGT TCATCATCGTGCTGCCGGAGCGCACCGTGGTCAACGCCAATACGGCCGAGCCCGAGGTCCTGTCCGCCGTCATCACCAAC CTGGCCCTGGTCCGCGCGCGCGAACTGGTGCGCGAACGCGATCGCGCGTACTTCAACAATGTCGGCGACCTGCAGACCAA GCTGGGCAGCGTCGCGCCGCAGGCCGACACCAGCAACCTGTCCTCCATGCTGGACGTCCGCTCCCACTATTTCCTGATTT ATGGCCTGGTGCGCCATGAGCGCGCCAGCCGCCTCCAGGTATCGCTGGTTTACCGGGGCGAGGTGCTGGGTAACACCAAC ACCACTCGTGTGCTGTGGATCCACGACACGGACCGGCTTCCCGACATGCGATGA
Upstream 100 bases:
>100_bases GCGTCGTCGTTCGCGCCGTCGAGTTGTCCATCCAGGCCCGCATGGGCGACGGCGATGCGCCGCGCGATTTCCGCAAGATC TGCATGACCGGCCTGTGAAC
Downstream 100 bases:
>100_bases GCCATAGCGCAGATTTGCGTGCGCTGCGGCACGCTGCTTCCACCCTTGCGGGCCCGGCTACCGGGGGAGAATGCTATTGA CGCGGTTTAGTCACACAGGC
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRRRLPPLSRRRMRGAAVVTALLMVTLAVVIVSGMLWRQQVQIRSIENQRLLAQATWVERAAVDWARLILRDDQRRTSVD ELGEPWAVPIAETRLSDFLGAALRTDQAGETSFLSGRILDAQARFNLTNLVLWTATPTQGRAATVDPAALAAYRRLLQTV GLNPSLAETTGRFMLRAAQGGSDGQPAPRPPDSAQSLLAIPGYTPEMVTALEPFIIVLPERTVVNANTAEPEVLSAVITN LALVRARELVRERDRAYFNNVGDLQTKLGSVAPQADTSNLSSMLDVRSHYFLIYGLVRHERASRLQVSLVYRGEVLGNTN TTRVLWIHDTDRLPDMR
Sequences:
>Translated_337_residues MRRRLPPLSRRRMRGAAVVTALLMVTLAVVIVSGMLWRQQVQIRSIENQRLLAQATWVERAAVDWARLILRDDQRRTSVD ELGEPWAVPIAETRLSDFLGAALRTDQAGETSFLSGRILDAQARFNLTNLVLWTATPTQGRAATVDPAALAAYRRLLQTV GLNPSLAETTGRFMLRAAQGGSDGQPAPRPPDSAQSLLAIPGYTPEMVTALEPFIIVLPERTVVNANTAEPEVLSAVITN LALVRARELVRERDRAYFNNVGDLQTKLGSVAPQADTSNLSSMLDVRSHYFLIYGLVRHERASRLQVSLVYRGEVLGNTN TTRVLWIHDTDRLPDMR >Mature_337_residues MRRRLPPLSRRRMRGAAVVTALLMVTLAVVIVSGMLWRQQVQIRSIENQRLLAQATWVERAAVDWARLILRDDQRRTSVD ELGEPWAVPIAETRLSDFLGAALRTDQAGETSFLSGRILDAQARFNLTNLVLWTATPTQGRAATVDPAALAAYRRLLQTV GLNPSLAETTGRFMLRAAQGGSDGQPAPRPPDSAQSLLAIPGYTPEMVTALEPFIIVLPERTVVNANTAEPEVLSAVITN LALVRARELVRERDRAYFNNVGDLQTKLGSVAPQADTSNLSSMLDVRSHYFLIYGLVRHERASRLQVSLVYRGEVLGNTN TTRVLWIHDTDRLPDMR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 37409; Mature: 37409
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRLPPLSRRRMRGAAVVTALLMVTLAVVIVSGMLWRQQVQIRSIENQRLLAQATWVER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AAVDWARLILRDDQRRTSVDELGEPWAVPIAETRLSDFLGAALRTDQAGETSFLSGRILD HHHHHHHHHHHCCCHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE AQARFNLTNLVLWTATPTQGRAATVDPAALAAYRRLLQTVGLNPSLAETTGRFMLRAAQG HHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCC GSDGQPAPRPPDSAQSLLAIPGYTPEMVTALEPFIIVLPERTVVNANTAEPEVLSAVITN CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCEEEEECCCEEECCCCCCHHHHHHHHHH LALVRARELVRERDRAYFNNVGDLQTKLGSVAPQADTSNLSSMLDVRSHYFLIYGLVRHE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RASRLQVSLVYRGEVLGNTNTTRVLWIHDTDRLPDMR HHCCEEEEEEEECEEECCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MRRRLPPLSRRRMRGAAVVTALLMVTLAVVIVSGMLWRQQVQIRSIENQRLLAQATWVER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AAVDWARLILRDDQRRTSVDELGEPWAVPIAETRLSDFLGAALRTDQAGETSFLSGRILD HHHHHHHHHHHCCCHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE AQARFNLTNLVLWTATPTQGRAATVDPAALAAYRRLLQTVGLNPSLAETTGRFMLRAAQG HHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCC GSDGQPAPRPPDSAQSLLAIPGYTPEMVTALEPFIIVLPERTVVNANTAEPEVLSAVITN CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCEEEEECCCEEECCCCCCHHHHHHHHHH LALVRARELVRERDRAYFNNVGDLQTKLGSVAPQADTSNLSSMLDVRSHYFLIYGLVRHE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RASRLQVSLVYRGEVLGNTNTTRVLWIHDTDRLPDMR HHCCEEEEEEEECEEECCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]