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The map label for this gene is yigC [C]

Identifier: 73542755

GI number: 73542755

Start: 3380187

End: 3381611

Strand: Direct

Name: yigC [C]

Synonym: Reut_A3071

Alternate gene names: 73542755

Gene position: 3380187-3381611 (Clockwise)

Preceding gene: 73542754

Following gene: 73542756

Centisome position: 88.8

GC content: 68.07

Gene sequence:

>1425_bases
ATGAACTCGCCCTCCGCGCCCTTCGCTACCGCATCGGCGCACAAGACTTTCCACGACACCTCGCAGGATTTCCACCAGTT
CCTGGCCGCATACCGCGAGGCGTATCCCGATGATGTGCTGCAGATCCGCGAACCGGTCAGCGCCGATCAGGACCCGACCG
CGCTGGTCTGGGCACTCGCGGCGCAGGGCCGCCATCCGGCGCTGCTGTTCGAGCAGGTAGATGGACTTGGCACGCCACTG
GTCACCAACCTCTTCGCTTCGCGCGAGCGCGTGGGCCGCATGCTCGGCGGCGTGCCGCCATCTGCCATCCACGCCGAGTA
TCAGGCGCGCAGCCGCCGCATGGTCGCGCCGCGCGTGCTGGAGGGCGGCGCCGTCACCGGCCATGTCGAGACGCGCCACA
TCGACCTGCGCACCATCCCGGCGATCCGGCACTTCGCGAGCGACCGCGGCCCGTACATCACTAACGCGATCCTGATCGCG
GAAGACCCGGAGACCAGCGTCGGCAACGCGAGCTTCCACCGCTCGATGCTGCATTCGCCGACCGAAATCGCCACGAGCCT
GCATTCGCGCGGGCACCTGTGGCGCATGCAGCAGCGCGCGGCCCAACTGGGCAAGCCATTGCCGGTGGCGATGGTGATCG
GCGCGCACCCGCTGTTCATGCTTGCCGGCGCGGCTCGGCTGCCGTTCGGCGTGGATGAGCGCCATGTCGCCGGCGGCCTG
CTTGGCGCGCCGATGGAGGCGGTGCGCACGCCGCGCTATGGCATCCTCGTGCCGGCACACGCCGAGATCGTTCTTGAAGG
CGTGATCGATCCCGAAGCGCGCGTCGAGGAAGGCCCGTTCGGCGAGTTCACCGGCTATTCGTCGGACCGCTCGACCAACA
ACCTGCTGCGTGTGGAAAGCGTGATGCGGCGCACCGACGCGTGGCTTGTCGACGTGGTCGGCGGCAACTCGGCCGAGCAC
CTGAACCTTGGCCGCATCCCGCGCGAATCGGAGATGGTCGAAAAGCTCAGGGAGCGCTTTCCGAGCGTGACCGCCGTGCA
CTATCCGAGTTCGGGCACGCACTTCCACGCCTACGTGGCACTGCGCCAGAGCCGCCCGGGCGAAGCGCGCCAGGTGATGC
TGGGCCTGCTCGGCTGGGACCCGTACCTGAAGACCGTCGTGGCCGTCGACGAAGACGTCGACATCACGCGCGACGACGAA
GTGCTGTGGGCCATGGCCACGCATCTGCAGCCGCATCTCGATGTGGTGGTGGTCGACGGGTTGCCGGGTAGTGCGTTGGA
CCCATCTGCGTCCGGTGTTGGCACGACCTCGCGCATGGGACTGGATGCCACACGCGGGCCGAACTTCGATGGGGTGCGCG
CGCGCATCGATGCAGCGGCAATGGACAGGGCTCAGGCGCTGCTCGCACGCCTGGCAGTTCCGTAA

Upstream 100 bases:

>100_bases
TGAGCCACACCGAGTAGATCCGCAGGCATGGCACGGCGGCCGCGACGAGCGGCCGCCGGGGCAGCCTTCGCCGTGCCAAC
CCTGACGACAGGAGGCATTC

Downstream 100 bases:

>100_bases
GGGATTACCCCGTCGAAACGGCGGATTCATCGTCCAACCCGATCGATAAATCCGCCACGAGCATTGTTCCTGACCGCCCC
CGCTGGCATGCTGGATTCAT

Product: carboxylyase-like protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MNSPSAPFATASAHKTFHDTSQDFHQFLAAYREAYPDDVLQIREPVSADQDPTALVWALAAQGRHPALLFEQVDGLGTPL
VTNLFASRERVGRMLGGVPPSAIHAEYQARSRRMVAPRVLEGGAVTGHVETRHIDLRTIPAIRHFASDRGPYITNAILIA
EDPETSVGNASFHRSMLHSPTEIATSLHSRGHLWRMQQRAAQLGKPLPVAMVIGAHPLFMLAGAARLPFGVDERHVAGGL
LGAPMEAVRTPRYGILVPAHAEIVLEGVIDPEARVEEGPFGEFTGYSSDRSTNNLLRVESVMRRTDAWLVDVVGGNSAEH
LNLGRIPRESEMVEKLRERFPSVTAVHYPSSGTHFHAYVALRQSRPGEARQVMLGLLGWDPYLKTVVAVDEDVDITRDDE
VLWAMATHLQPHLDVVVVDGLPGSALDPSASGVGTTSRMGLDATRGPNFDGVRARIDAAAMDRAQALLARLAVP

Sequences:

>Translated_474_residues
MNSPSAPFATASAHKTFHDTSQDFHQFLAAYREAYPDDVLQIREPVSADQDPTALVWALAAQGRHPALLFEQVDGLGTPL
VTNLFASRERVGRMLGGVPPSAIHAEYQARSRRMVAPRVLEGGAVTGHVETRHIDLRTIPAIRHFASDRGPYITNAILIA
EDPETSVGNASFHRSMLHSPTEIATSLHSRGHLWRMQQRAAQLGKPLPVAMVIGAHPLFMLAGAARLPFGVDERHVAGGL
LGAPMEAVRTPRYGILVPAHAEIVLEGVIDPEARVEEGPFGEFTGYSSDRSTNNLLRVESVMRRTDAWLVDVVGGNSAEH
LNLGRIPRESEMVEKLRERFPSVTAVHYPSSGTHFHAYVALRQSRPGEARQVMLGLLGWDPYLKTVVAVDEDVDITRDDE
VLWAMATHLQPHLDVVVVDGLPGSALDPSASGVGTTSRMGLDATRGPNFDGVRARIDAAAMDRAQALLARLAVP
>Mature_474_residues
MNSPSAPFATASAHKTFHDTSQDFHQFLAAYREAYPDDVLQIREPVSADQDPTALVWALAAQGRHPALLFEQVDGLGTPL
VTNLFASRERVGRMLGGVPPSAIHAEYQARSRRMVAPRVLEGGAVTGHVETRHIDLRTIPAIRHFASDRGPYITNAILIA
EDPETSVGNASFHRSMLHSPTEIATSLHSRGHLWRMQQRAAQLGKPLPVAMVIGAHPLFMLAGAARLPFGVDERHVAGGL
LGAPMEAVRTPRYGILVPAHAEIVLEGVIDPEARVEEGPFGEFTGYSSDRSTNNLLRVESVMRRTDAWLVDVVGGNSAEH
LNLGRIPRESEMVEKLRERFPSVTAVHYPSSGTHFHAYVALRQSRPGEARQVMLGLLGWDPYLKTVVAVDEDVDITRDDE
VLWAMATHLQPHLDVVVVDGLPGSALDPSASGVGTTSRMGLDATRGPNFDGVRARIDAAAMDRAQALLARLAVP

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=410, Percent_Identity=27.8048780487805, Blast_Score=151, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320748, Length=459, Percent_Identity=24.8366013071895, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 51502; Mature: 51502

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPSAPFATASAHKTFHDTSQDFHQFLAAYREAYPDDVLQIREPVSADQDPTALVWALA
CCCCCCCCEECCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
AQGRHPALLFEQVDGLGTPLVTNLFASRERVGRMLGGVPPSAIHAEYQARSRRMVAPRVL
HCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHC
EGGAVTGHVETRHIDLRTIPAIRHFASDRGPYITNAILIAEDPETSVGNASFHRSMLHSP
CCCEEEEEEEEEEEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCH
TEIATSLHSRGHLWRMQQRAAQLGKPLPVAMVIGAHPLFMLAGAARLPFGVDERHVAGGL
HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCHHCCCCCCCHHHCCCC
LGAPMEAVRTPRYGILVPAHAEIVLEGVIDPEARVEEGPFGEFTGYSSDRSTNNLLRVES
CCCCHHHHCCCCCEEEECCHHEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
VMRRTDAWLVDVVGGNSAEHLNLGRIPRESEMVEKLRERFPSVTAVHYPSSGTHFHAYVA
HHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEE
LRQSRPGEARQVMLGLLGWDPYLKTVVAVDEDVDITRDDEVLWAMATHLQPHLDVVVVDG
EECCCCCHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECC
LPGSALDPSASGVGTTSRMGLDATRGPNFDGVRARIDAAAMDRAQALLARLAVP
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSPSAPFATASAHKTFHDTSQDFHQFLAAYREAYPDDVLQIREPVSADQDPTALVWALA
CCCCCCCCEECCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
AQGRHPALLFEQVDGLGTPLVTNLFASRERVGRMLGGVPPSAIHAEYQARSRRMVAPRVL
HCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHC
EGGAVTGHVETRHIDLRTIPAIRHFASDRGPYITNAILIAEDPETSVGNASFHRSMLHSP
CCCEEEEEEEEEEEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCH
TEIATSLHSRGHLWRMQQRAAQLGKPLPVAMVIGAHPLFMLAGAARLPFGVDERHVAGGL
HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCHHCCCCCCCHHHCCCC
LGAPMEAVRTPRYGILVPAHAEIVLEGVIDPEARVEEGPFGEFTGYSSDRSTNNLLRVES
CCCCHHHHCCCCCEEEECCHHEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
VMRRTDAWLVDVVGGNSAEHLNLGRIPRESEMVEKLRERFPSVTAVHYPSSGTHFHAYVA
HHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEE
LRQSRPGEARQVMLGLLGWDPYLKTVVAVDEDVDITRDDEVLWAMATHLQPHLDVVVVDG
EECCCCCHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECC
LPGSALDPSASGVGTTSRMGLDATRGPNFDGVRARIDAAAMDRAQALLARLAVP
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]