Click here to switch to the map view.

The map label for this gene is ubiX [H]

Identifier: 73542732

GI number: 73542732

Start: 3351450

End: 3352076

Strand: Direct

Name: ubiX [H]

Synonym: Reut_A3048

Alternate gene names: 73542732

Gene position: 3351450-3352076 (Clockwise)

Preceding gene: 73542731

Following gene: 73542736

Centisome position: 88.04

GC content: 66.67

Gene sequence:

>627_bases
ATGCCCGTGACCGGCTGCGCCGTGCCGCAACGGCTGATCGTCGCCATCACGGGCGCCACCGGCGCCATCTATGGCGTGCG
CCTGCTGCAGGTACTGCGCGAGGTGACGACGGTGGAAACCCACTTGCTGATTTCCCCGGCGGGCGTGATGAACCTCCAGC
ACGAACTGGAGATCAGTCGCGCCGACGTGGAAGCCATGGCCGACGTCGTGCACAACGTGCGCGATATCGGCGCTACCATT
GCCAGCGGCTCGTTCCGCGCGCATGCCATGGTGGTGGCCCCGTGCTCGATGCGCACGCTGGCTGCCATCGCACACGGCCT
TTCGGATAACCTCATCACCCGCGCCGCGGACGTCACGCTCAAGGAGCGCCGCCGGCTCGTGCTGATGGTGCGGGAAACGC
CGCTGAATCTCGCGCATCTGCGCAATATGACGGCGGTGACGGAAATGGGCGGCATCGTGTTCCCGCCCGTGCCGGGCTTC
TACCAGAAGCCGCAGAGCATTGCCGAACTGGTCGACCATACCGTGGGCCGCGTGCTCGACCTGGTCGATTTGCCCGATAT
CGGCCAGACACTGGCGCCGAGCTGGCCGGGCCTCAATGGCAAAGCCGGCGAGAGCGGCGGCAACTGA

Upstream 100 bases:

>100_bases
AGCTCTACGTGAACGGCGAGTTCATCGGCGGCTCGGACATCATGATGGAGATGTACCAGAACGGCGAACTGCAGACCCTG
CTCAAAGGCTGAGGACTGCC

Downstream 100 bases:

>100_bases
GCCCCCTCGCCGGCCTTCGGGCCTCTCCCCTTACCAGTAGTGGCGCCGGCCGTAGTAGCCGTATCCACCGTAGTACGGCC
GCGGCGATACCACTACCGCC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPVTGCAVPQRLIVAITGATGAIYGVRLLQVLREVTTVETHLLISPAGVMNLQHELEISRADVEAMADVVHNVRDIGATI
ASGSFRAHAMVVAPCSMRTLAAIAHGLSDNLITRAADVTLKERRRLVLMVRETPLNLAHLRNMTAVTEMGGIVFPPVPGF
YQKPQSIAELVDHTVGRVLDLVDLPDIGQTLAPSWPGLNGKAGESGGN

Sequences:

>Translated_208_residues
MPVTGCAVPQRLIVAITGATGAIYGVRLLQVLREVTTVETHLLISPAGVMNLQHELEISRADVEAMADVVHNVRDIGATI
ASGSFRAHAMVVAPCSMRTLAAIAHGLSDNLITRAADVTLKERRRLVLMVRETPLNLAHLRNMTAVTEMGGIVFPPVPGF
YQKPQSIAELVDHTVGRVLDLVDLPDIGQTLAPSWPGLNGKAGESGGN
>Mature_207_residues
PVTGCAVPQRLIVAITGATGAIYGVRLLQVLREVTTVETHLLISPAGVMNLQHELEISRADVEAMADVVHNVRDIGATIA
SGSFRAHAMVVAPCSMRTLAAIAHGLSDNLITRAADVTLKERRRLVLMVRETPLNLAHLRNMTAVTEMGGIVFPPVPGFY
QKPQSIAELVDHTVGRVLDLVDLPDIGQTLAPSWPGLNGKAGESGGN

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=190, Percent_Identity=55.2631578947368, Blast_Score=211, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6320746, Length=193, Percent_Identity=49.2227979274611, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22121; Mature: 21990

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTGCAVPQRLIVAITGATGAIYGVRLLQVLREVTTVETHLLISPAGVMNLQHELEISR
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHH
ADVEAMADVVHNVRDIGATIASGSFRAHAMVVAPCSMRTLAAIAHGLSDNLITRAADVTL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCH
KERRRLVLMVRETPLNLAHLRNMTAVTEMGGIVFPPVPGFYQKPQSIAELVDHTVGRVLD
HHCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCHHCCHHHHHHHHHHHHHHHHH
LVDLPDIGQTLAPSWPGLNGKAGESGGN
HCCCCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PVTGCAVPQRLIVAITGATGAIYGVRLLQVLREVTTVETHLLISPAGVMNLQHELEISR
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHH
ADVEAMADVVHNVRDIGATIASGSFRAHAMVVAPCSMRTLAAIAHGLSDNLITRAADVTL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCH
KERRRLVLMVRETPLNLAHLRNMTAVTEMGGIVFPPVPGFYQKPQSIAELVDHTVGRVLD
HHCCEEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCHHCCHHHHHHHHHHHHHHHHH
LVDLPDIGQTLAPSWPGLNGKAGESGGN
HCCCCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]