| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is hemK [H]
Identifier: 73542730
GI number: 73542730
Start: 3350143
End: 3351012
Strand: Direct
Name: hemK [H]
Synonym: Reut_A3046
Alternate gene names: 73542730
Gene position: 3350143-3351012 (Clockwise)
Preceding gene: 73542729
Following gene: 73542731
Centisome position: 88.01
GC content: 69.31
Gene sequence:
>870_bases ATGTCTCCTGCCATGTCCGGCGCCTTGCCGGCTACTCCCACCGTGCGTGAAGCGCAGTCGCTCGCCGCCATGGCCGGCCT GCCGACGCTGGAAGCGCGGATGCTGCTGACCCACGTCACGGGCCTGACCCGCACCCAGCTGATCACGCGTGACGGCGACA CCCTGACCCTGCCGCAGCGCGATGCCTTTGCCACGCTGCTGGCGCGGCGCTTGGCCGGCGAGCCGATGGCCTACCTGATC GGCGAGCGCGAGTTCTTCGGCCGCAAGTTCCGCGTCACGCCCGATGTGCTGATCCCGCGCCCCGACACGGAAATCGCCGC CGAATCGTCGCTCGCGCGGCTGGCCGGCGTGCCGCATCCGCGCGTGCTCGATTTGGGCACGGGCTCGGGCATCCTGGCCG TGACCATTGCACGCGAACGGACCGATGCCGAAGTCTGGGCCACCGATATCTCGCCCGGCGCGCTGATGGTGGCGCAGGAC AATGCCAGCGCGCTTGGCGCCAACCGCATCCATTTCCTGGTGTCGGACTGGTATGCCGCGCTGCCGGCCGAACTGCATTT CCACCTGATCGTCAGCAACCCGCCCTATATCGCCGAAGGCGATCCGCATCTGATCGAGGGTGACCTGCGGTTCGAACCGA TCGACGCGCTTACCGATCACAAAGACGGACTGTCCGACCTGGCGGCGATCGTCGCCGGCGCGCACGGGCGGCTGCTGCCA GGCGGCTGGCTGCTGATGGAGCATGGCTACGACCAGGCCGAGGCCACACAAGGGCTGCTGGAGCGTGCCGGCTTCACCGA GGTCTTCACCGCACGGGACCTCGCCGGACAGCAGCGCTGCACTGGAGGGCGCCGCCGGCCGGCCGCCTGA
Upstream 100 bases:
>100_bases CTGCCAGACCCGCCGAAAGCCCCGCCAGGCCAACGCCCGGCGGGGTTTTTTGTTTTTTGGCTGGCGGTTTGCCGCCGGCG TATCCGTCCCCGCCTTGCCG
Downstream 100 bases:
>100_bases AGGCTGGCGGCGATTCCGGTAAAATTTGCAGCCAGATCACCACCGCACGGTCACCGTGCGGCCTTCGACACCCGGTGGCG CCTGACGGTCAGGTGCCCCT
Product: modification methylase HemK
Products: NA
Alternate protein names: M.EcoKHemKP; Protein-(glutamine-N(5)) MTase hemK; Protein-glutamine N-methyltransferase hemK [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSPAMSGALPATPTVREAQSLAAMAGLPTLEARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLI GEREFFGRKFRVTPDVLIPRPDTEIAAESSLARLAGVPHPRVLDLGTGSGILAVTIARERTDAEVWATDISPGALMVAQD NASALGANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHLIEGDLRFEPIDALTDHKDGLSDLAAIVAGAHGRLLP GGWLLMEHGYDQAEATQGLLERAGFTEVFTARDLAGQQRCTGGRRRPAA
Sequences:
>Translated_289_residues MSPAMSGALPATPTVREAQSLAAMAGLPTLEARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLI GEREFFGRKFRVTPDVLIPRPDTEIAAESSLARLAGVPHPRVLDLGTGSGILAVTIARERTDAEVWATDISPGALMVAQD NASALGANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHLIEGDLRFEPIDALTDHKDGLSDLAAIVAGAHGRLLP GGWLLMEHGYDQAEATQGLLERAGFTEVFTARDLAGQQRCTGGRRRPAA >Mature_288_residues SPAMSGALPATPTVREAQSLAAMAGLPTLEARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLIG EREFFGRKFRVTPDVLIPRPDTEIAAESSLARLAGVPHPRVLDLGTGSGILAVTIARERTDAEVWATDISPGALMVAQDN ASALGANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHLIEGDLRFEPIDALTDHKDGLSDLAAIVAGAHGRLLPG GWLLMEHGYDQAEATQGLLERAGFTEVFTARDLAGQQRCTGGRRRPAA
Specific function: Methylates the translation termination release factor RF1/PrfA on 'Gln-235' and RF2/PrfB on 'Gln-252' [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=306, Percent_Identity=28.4313725490196, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI1787463, Length=270, Percent_Identity=45.5555555555556, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI87082085, Length=199, Percent_Identity=34.6733668341709, Blast_Score=89, Evalue=4e-19, Organism=Drosophila melanogaster, GI24582226, Length=199, Percent_Identity=30.6532663316583, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 31005; Mature: 30874
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAMSGALPATPTVREAQSLAAMAGLPTLEARMLLTHVTGLTRTQLITRDGDTLTLPQR CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHEEEECCCCEEECCCH DAFATLLARRLAGEPMAYLIGEREFFGRKFRVTPDVLIPRPDTEIAAESSLARLAGVPHP HHHHHHHHHHHCCCCCEEEECCHHHHCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCC RVLDLGTGSGILAVTIARERTDAEVWATDISPGALMVAQDNASALGANRIHFLVSDWYAA EEEEECCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEHHHHHH LPAELHFHLIVSNPPYIAEGDPHLIEGDLRFEPIDALTDHKDGLSDLAAIVAGAHGRLLP CCCEEEEEEEECCCCEEECCCCCEEECCCEECCCHHHHCCCCCHHHHHHHHHCCCCCCCC GGWLLMEHGYDQAEATQGLLERAGFTEVFTARDLAGQQRCTGGRRRPAA CCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure SPAMSGALPATPTVREAQSLAAMAGLPTLEARMLLTHVTGLTRTQLITRDGDTLTLPQR CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHEEEECCCCEEECCCH DAFATLLARRLAGEPMAYLIGEREFFGRKFRVTPDVLIPRPDTEIAAESSLARLAGVPHP HHHHHHHHHHHCCCCCEEEECCHHHHCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCC RVLDLGTGSGILAVTIARERTDAEVWATDISPGALMVAQDNASALGANRIHFLVSDWYAA EEEEECCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEHHHHHH LPAELHFHLIVSNPPYIAEGDPHLIEGDLRFEPIDALTDHKDGLSDLAAIVAGAHGRLLP CCCEEEEEEEECCCCEEECCCCCEEECCCEECCCHHHHCCCCCHHHHHHHHHCCCCCCCC GGWLLMEHGYDQAEATQGLLERAGFTEVFTARDLAGQQRCTGGRRRPAA CCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7883187; 7543480; 11805295; 8905232; 9278503 [H]