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The map label for this gene is omp32 [H]

Identifier: 73542674

GI number: 73542674

Start: 3280774

End: 3281937

Strand: Direct

Name: omp32 [H]

Synonym: Reut_A2990

Alternate gene names: 73542674

Gene position: 3280774-3281937 (Clockwise)

Preceding gene: 73542655

Following gene: 73542675

Centisome position: 86.19

GC content: 62.46

Gene sequence:

>1164_bases
ATGAAGAAATCGCTTATCGCGCTGGCAGCACTGGGCGCGTTTGCAGGTGCGGCACAAGCACAATCGAGCGTGACGCTTTA
CGGTGTGGTCGACGCCAACATCGAATACGTCAATAACGTCGGTGTCGTACCCGTTGCGACCAACGGGTTCAATCGCGGCC
CTGCCCATTCCGTTACCCGCATGGATCCGGGTGGCCTGTCCGGGTCGCGCTGGGGCTTGCGCGGCACCGAGGATCTCGGT
GGCGGCCTGAAGGCCCTGTTCGTGCTGGAAAGCGGCTTCAGCTCCGACACCGGTGGCCTGCAGCAAAGCGGCCGTCTGTT
TGGTCGTCAGTCCTTCGTGGGTCTGCAAAGTGACCGCATCGGCCAGTTCACCTTCGGCCGCCAGTACGTCTCGATGTTCG
ACGCGCTGGCCAACTTCTCGCCGACTGCCTACGCCACCCAGTACGAACCTGTCGTACTGCAGCAAGGCCCCAACTACCGT
GAAGACAACACCATCAAGTACACCGGCAAGTTCGGTCCGATCACGGCGGGCGCCCATTGGTCGTTCGGTACTGGTGTAGC
GTTGCCGGCGACGGTTGGCGTGGCAACGCCGATCGGCGGCAACGGCGAAGTCCCGGGCGCGTTCCGCCGCGATACGGGCT
ACGGTGCTGCCGTGACCTACCTTGCAGGCCCGTTCGGCGCAACGGTTGGCTACGATCAGTGGAACCCGACCATCGGTACC
GGCAACGGCACCGTCAAGAAAGCCTCCGCCGCAGCCAGCTATTCGTATGGCCCGGCCAAGATCATGGGCGGCTACCGCTG
GGGCCAGCAGAAGAACGCCGCGGACGTGCTGATCCAGCGTGACGACTTCTACTGGATCGGTGCTAACTACCAGGTCACCC
CGGCCGTCGGCCTGACGCTGGAATACAACTACGACAACATCAAGAGCCTGTTCGGCGACACGCACGTTGCCAACCCGTGG
CAGATCGCCTTCATCGCGACCTACTCGTTCTCCAAGCGTACCGACGTCTACCTGAGCACTGCCTACGCCAAGAACGCCGG
CCTGACGATGGAATCGCTGGCCACGACGTACGCGACGAGCCTTTCCTTGGGTCAAAGCTATGCGCTGGCCAATGGTCAAA
GCTCGATGTTCGGCGCTGCCATCGGCATCCGCCACAAGTTCTGA

Upstream 100 bases:

>100_bases
CAGCTTCTCAGCAACGCAGGAAGTCTGGCAGTGAGGAATGGAGATTTAGGAGGTTTTCTCGCTCGCCACATAACAATTCA
TTAAGTGGAGATCGTTGAGC

Downstream 100 bases:

>100_bases
GCGTATTTCGCCTGAACCGCAAAGGCACCTTCGGGTGCCTTTTTCTTTGGCATGGCGCATGTGCGGTCATAGGGCATCAC
CTCATCGGCGTTCACGCGGG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKKSLIALAALGAFAGAAQAQSSVTLYGVVDANIEYVNNVGVVPVATNGFNRGPAHSVTRMDPGGLSGSRWGLRGTEDLG
GGLKALFVLESGFSSDTGGLQQSGRLFGRQSFVGLQSDRIGQFTFGRQYVSMFDALANFSPTAYATQYEPVVLQQGPNYR
EDNTIKYTGKFGPITAGAHWSFGTGVALPATVGVATPIGGNGEVPGAFRRDTGYGAAVTYLAGPFGATVGYDQWNPTIGT
GNGTVKKASAAASYSYGPAKIMGGYRWGQQKNAADVLIQRDDFYWIGANYQVTPAVGLTLEYNYDNIKSLFGDTHVANPW
QIAFIATYSFSKRTDVYLSTAYAKNAGLTMESLATTYATSLSLGQSYALANGQSSMFGAAIGIRHKF

Sequences:

>Translated_387_residues
MKKSLIALAALGAFAGAAQAQSSVTLYGVVDANIEYVNNVGVVPVATNGFNRGPAHSVTRMDPGGLSGSRWGLRGTEDLG
GGLKALFVLESGFSSDTGGLQQSGRLFGRQSFVGLQSDRIGQFTFGRQYVSMFDALANFSPTAYATQYEPVVLQQGPNYR
EDNTIKYTGKFGPITAGAHWSFGTGVALPATVGVATPIGGNGEVPGAFRRDTGYGAAVTYLAGPFGATVGYDQWNPTIGT
GNGTVKKASAAASYSYGPAKIMGGYRWGQQKNAADVLIQRDDFYWIGANYQVTPAVGLTLEYNYDNIKSLFGDTHVANPW
QIAFIATYSFSKRTDVYLSTAYAKNAGLTMESLATTYATSLSLGQSYALANGQSSMFGAAIGIRHKF
>Mature_387_residues
MKKSLIALAALGAFAGAAQAQSSVTLYGVVDANIEYVNNVGVVPVATNGFNRGPAHSVTRMDPGGLSGSRWGLRGTEDLG
GGLKALFVLESGFSSDTGGLQQSGRLFGRQSFVGLQSDRIGQFTFGRQYVSMFDALANFSPTAYATQYEPVVLQQGPNYR
EDNTIKYTGKFGPITAGAHWSFGTGVALPATVGVATPIGGNGEVPGAFRRDTGYGAAVTYLAGPFGATVGYDQWNPTIGT
GNGTVKKASAAASYSYGPAKIMGGYRWGQQKNAADVLIQRDDFYWIGANYQVTPAVGLTLEYNYDNIKSLFGDTHVANPW
QIAFIATYSFSKRTDVYLSTAYAKNAGLTMESLATTYATSLSLGQSYALANGQSSMFGAAIGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40884; Mature: 40884

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIALAALGAFAGAAQAQSSVTLYGVVDANIEYVNNVGVVPVATNGFNRGPAHSVTR
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCEEEEECCCCCCCCCCCEEE
MDPGGLSGSRWGLRGTEDLGGGLKALFVLESGFSSDTGGLQQSGRLFGRQSFVGLQSDRI
CCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCCHHHHCHHHCCHHEECCCCCCC
GQFTFGRQYVSMFDALANFSPTAYATQYEPVVLQQGPNYREDNTIKYTGKFGPITAGAHW
CCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCCEECCCCC
SFGTGVALPATVGVATPIGGNGEVPGAFRRDTGYGAAVTYLAGPFGATVGYDQWNPTIGT
CCCCCCCCCEECCEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEC
GNGTVKKASAAASYSYGPAKIMGGYRWGQQKNAADVLIQRDDFYWIGANYQVTPAVGLTL
CCCCEEECHHHCCCCCCCHHEECCCCCCCCCCCEEEEEEECCEEEECCCEEECCEEEEEE
EYNYDNIKSLFGDTHVANPWQIAFIATYSFSKRTDVYLSTAYAKNAGLTMESLATTYATS
EECCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
LSLGQSYALANGQSSMFGAAIGIRHKF
HHCCCEEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKSLIALAALGAFAGAAQAQSSVTLYGVVDANIEYVNNVGVVPVATNGFNRGPAHSVTR
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCEEEEECCCCCCCCCCCEEE
MDPGGLSGSRWGLRGTEDLGGGLKALFVLESGFSSDTGGLQQSGRLFGRQSFVGLQSDRI
CCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCCHHHHCHHHCCHHEECCCCCCC
GQFTFGRQYVSMFDALANFSPTAYATQYEPVVLQQGPNYREDNTIKYTGKFGPITAGAHW
CCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCCEECCCCC
SFGTGVALPATVGVATPIGGNGEVPGAFRRDTGYGAAVTYLAGPFGATVGYDQWNPTIGT
CCCCCCCCCEECCEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEC
GNGTVKKASAAASYSYGPAKIMGGYRWGQQKNAADVLIQRDDFYWIGANYQVTPAVGLTL
CCCCEEECHHHCCCCCCCHHEECCCCCCCCCCCEEEEEEECCEEEECCCEEECCEEEEEE
EYNYDNIKSLFGDTHVANPWQIAFIATYSFSKRTDVYLSTAYAKNAGLTMESLATTYATS
EECCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
LSLGQSYALANGQSSMFGAAIGIRHKF
HHCCCEEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]