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The map label for this gene is ydiK [H]

Identifier: 73542584

GI number: 73542584

Start: 3177407

End: 3178546

Strand: Direct

Name: ydiK [H]

Synonym: Reut_A2900

Alternate gene names: 73542584

Gene position: 3177407-3178546 (Clockwise)

Preceding gene: 73542583

Following gene: 73542587

Centisome position: 83.47

GC content: 65.44

Gene sequence:

>1140_bases
ATGCTGCAAACATCCATTTCCGAGCGGGCGCTGTCCCGCGGGCTGCTCGATGTCCTGATCCGCGCGGGGCTAATCGCCAC
GCTCGTCATCTTCTGCTTCGAGATCTTCCACCCGTTCTTCGACCTGGTGGTCTGGGCGCTGATCCTCGCGGTCACTATCT
ACCCGCTGCAAGTCAGGCTGCGCGGCCGGCTGGGACTCAGCGAGGGCCACATCGCCACGTTGATTGTCCTGCTTTCTATC
GCCATCATCCTGGTGCCTGCCTACCTGCTGGGCGTCGCCGTGTTCGAGTCGGTGGAACGCGCCATCGACGTCGTCAAGGA
CGGCAGACTCAGCATCCCCCAGCCGGCGGAGTCCGTCGCCAGCTGGCCGCTGGTGGGCCAGCAGCTCTATGCCTTCTGGC
AACAGGCGGCTACCGACCTGAGCGGCCTGCTGATGAAAGTCGCGCCGCAGCTGAAGGGGTTCAGCGTCGGCTTGCTGGCC
AAGCTGGCAGGCCTTGGCACGGGATTGCTGGTGTTCGTGTTCGCGCTGATCATCGCAGGCATCATCATGGCCTACGGCGA
GATGGGGTCGCGCAGCGCCGAGCGGATCGCCTCGCGCATCGTCGGGCCTGACCGCGGCCTACGCATCGTGGAATTGTGCA
CCGCGACCATTCGTGCCGTGGCGCAGGGCGTGGTCGGCATCGCCTTCATCCAGATGATGCTGATCGGCGTGGCCTTCATC
GTCAAGGACATTCCGGGCGCCGGGCTGCTGGCGCTTGCCGTCCTGCTGCTTGGCATCATGCAACTGCCGGCGACGCTGAT
CACAGTACCGGTGATTGTTTATGTCTTCGCCACCGAGGGCACCACCTTCGCGACGATCGTCTTCTCGATCTATGTGTTCG
TCGCCGGCCTCGCCGACAACGTGCTCAAGCCGCTGCTGCTCGGGCGCGGCGTGGACGTGCCGATGCCAGTGGTGCTGATC
GGCGCGCTCGGCGGGATGGTCAGCGGCGGCATCATCGGCCTGTTCATCGGCCCGGTGATGCTGGCGGTCGGCTACCGTCT
GTTCTGGCTTTGGGTTGACGAACCCGCCGCCACGGTCGAAGTCGTGACACCCGAGCCGAACGAGGCGCTGTCGCCGGCAG
CGCCCCCTCGCGTCAGCTGA

Upstream 100 bases:

>100_bases
ACTCCGCCTGACCTAGACTGAATGCGGCGTTCTGCGCCGTGCACTTTCCGCGGCCGCCCGCGCAGCCAGCGACCGGCCGC
GCCCTGCAAGGAGACAGGCG

Downstream 100 bases:

>100_bases
AACCCTTCGCGGTCTCAGCGTTCCGAGCCCTGGCGGGCCAACAGGTCCGCCATGTCGTCGGCGTGCTCTTCCTCTACGGC
GAGGATCTCTTCCATCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MLQTSISERALSRGLLDVLIRAGLIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRLRGRLGLSEGHIATLIVLLSI
AIILVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVASWPLVGQQLYAFWQQAATDLSGLLMKVAPQLKGFSVGLLA
KLAGLGTGLLVFVFALIIAGIIMAYGEMGSRSAERIASRIVGPDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFI
VKDIPGAGLLALAVLLLGIMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMPVVLI
GALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVEVVTPEPNEALSPAAPPRVS

Sequences:

>Translated_379_residues
MLQTSISERALSRGLLDVLIRAGLIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRLRGRLGLSEGHIATLIVLLSI
AIILVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVASWPLVGQQLYAFWQQAATDLSGLLMKVAPQLKGFSVGLLA
KLAGLGTGLLVFVFALIIAGIIMAYGEMGSRSAERIASRIVGPDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFI
VKDIPGAGLLALAVLLLGIMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMPVVLI
GALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVEVVTPEPNEALSPAAPPRVS
>Mature_379_residues
MLQTSISERALSRGLLDVLIRAGLIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRLRGRLGLSEGHIATLIVLLSI
AIILVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVASWPLVGQQLYAFWQQAATDLSGLLMKVAPQLKGFSVGLLA
KLAGLGTGLLVFVFALIIAGIIMAYGEMGSRSAERIASRIVGPDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFI
VKDIPGAGLLALAVLLLGIMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMPVVLI
GALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVEVVTPEPNEALSPAAPPRVS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=345, Percent_Identity=30.1449275362319, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40129; Mature: 40129

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTSISERALSRGLLDVLIRAGLIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGRLGLSEGHIATLIVLLSIAIILVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SWPLVGQQLYAFWQQAATDLSGLLMKVAPQLKGFSVGLLAKLAGLGTGLLVFVFALIIAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
IIMAYGEMGSRSAERIASRIVGPDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFI
HHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDIPGAGLLALAVLLLGIMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADN
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VLKPLLLGRGVDVPMPVVLIGALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEE
VVTPEPNEALSPAAPPRVS
EECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLQTSISERALSRGLLDVLIRAGLIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGRLGLSEGHIATLIVLLSIAIILVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SWPLVGQQLYAFWQQAATDLSGLLMKVAPQLKGFSVGLLAKLAGLGTGLLVFVFALIIAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
IIMAYGEMGSRSAERIASRIVGPDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFI
HHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDIPGAGLLALAVLLLGIMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADN
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VLKPLLLGRGVDVPMPVVLIGALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEE
VVTPEPNEALSPAAPPRVS
EECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]