| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is speE [H]
Identifier: 73542577
GI number: 73542577
Start: 3168493
End: 3171123
Strand: Reverse
Name: speE [H]
Synonym: Reut_A2892
Alternate gene names: 73542577
Gene position: 3171123-3168493 (Counterclockwise)
Preceding gene: 73542578
Following gene: 73542576
Centisome position: 83.31
GC content: 68.72
Gene sequence:
>2631_bases ATGAGAGAAGCGCATGCCGGCACGGACGCCGGCAAACAGCAAGCGAGGCACAGATCGGGCAAATCACGGCGTACGCAAGG CGCCGCCGTGCAGGCAGGGCAGGGTCAACTGGCGCAACACGGCGCCTTGCTGGCACCTGCCCTGTTGCTTTTCGCGTCCG GCGCGGCCGGACTGATTTACCAGGTTCTCTGGATCAAGCAGCTTGCGCTCGTGGTCGGGGTGGATGTGCACGCCGTGACC ACGGCCGTGAGCGCGTTCTTTGCCGGGCTGGCGCTCGGCGGCTGGCTGTTCGGCCGCGTCGCTGACCGCCATGCGAGGCC GTTGCGGCTGTATGCGTGGCTCGAAATCGGCGTGCTCGTGCTGGCGATTGGCGCCACGCTGTTGCTGGCACGATCCGCTG CGCCGTTCGCATGGCTCGAAAGTCGTGTAGGCCTGCTGGCCTGGGCATTGCCGTTCGTGCTGGTGATCCTGCCGGCTGCA GCCATGGGCGGCACGCTGCCAGTCTTGATGCGCGTGCTGGCGTCGCGTGCGGGGCAGGTCGGCACGCACGGCGGGCGCTT GTATGCCGCCAATACCACGGGCGCCATTGCCGGCACGCTGCTGGCGGGCTTCGTGCTGATTCCGTGGCTCGGCATCACGG GCAGTGCGCTGGCCGCGGCCACGCTCAACGGCGTCGCAGCGATCGCCGCGTTTGCCATGGCATCGCGAGCCGTAGCAACA GAAGCGTCGGCGGCAGACCCGGTGCCCGCATCTGCACAGCCGGCGCGAGATGCCGGTGGTGGCCGGCTCGCGCTCGTGCT CTATGCCGCAGCGGGCGGCATCGCGCTCGGCTATGAAGTGGTCTGGTCGCAAGCGATCGTGCAGTTCATCAGCACGCGCA CGTTTGCGTTCACGGTGGTGCTGGCCACGTATCTGGCCGGGCTGGCGATCGGCAGCGCGCTGGCCGCGCGCCGCGCCGAT CGCGTACGCGATCCGTGGGGCGCATTCGCGATGCTGATCGCCGCGGCCGGGCTCGTCGCACTGCTGGAAATCGTCGTACT CGGGGAGTGGCTGCTGCTCGCGCAAGCCGCGGTATCGGCGTGGGTGCAGTCCGCCACGTCGAACGGTCTGGCTGCCGCAT GCGCGAGCTTCGCGGTGGCGGCGCTGTGCGTGGTGTTCGTGCCGACGCTGCTGCTGGGGGCCGCATTCCCGTTCGTGTTG CGCGTCGGCGTGGACAACCACCGGCTTGGCTCTGGCGTGGGTGCGGTGGTCGCGCTCAATACGCTGGGTGGTATCGCGGG GACGGCTGTGGCGGGGTTTGTGCTGGTGCCGCGCATCGGGCTTGTGCACGCACTGTCGCTGTTGGCCGTCGGTGCCGGCA TCGTTGGCGTGATCGCGGTGGCACTCGGCTCTGGCGTGCACAAGCTCGCACGTTGGGCGGTGCCGATGGTGGCATTGCTC GCCGTGATCACCGCGGCGCTGGCGCCCGCGGACCGGCTCGCCACGCTGCTCGCACGCGCACGCGGTGGCGAGATTGCGTT CTACGAGGAAGGCCGCGGCGCGACTGTAGCGGTGGTGAAGCAGGCATCTGCGACCCACACGTTCAATCGGCTCTATATCC AGGGCGTGTCCAACTCCGGCGACACCATGACGTCTCTGCGCTACATGCGCCTGCAGGCGCTGCTGCCGCTGATCGTGCAT GGCGGCACGCCGCGTTCGGTGCTGGTGATCGGTCTGGGCACGGGCATCACGGCCGGCGCCACGCTGCCGTATCCGGGCCT TGAACATCGCGTCGTCGCAGAGCTGCTGCCACCCGTGCTGCGCGCGGTGCCCCAGTTCCAGGGCAACTACAACGTGGCCG GCGACAAGCGTGTCGATATCCGGCTGCGCGATGGCCGGCGCGAACTGCTGCAGAGCGAACAACGCTACGACCTGATCACG CTGGAGCCACCCCCGCCTTCGGCCGCGGGCGTGGTTAACCTGTACTCGACCGATTTCTACAAGCTGGCGGCGGCGCGCCT GCAGCCGGGCGGGCTGGTCGCGCAATGGCTGCCGCTGCCCACGCAGAACGACGAGGACACGCGTGCGCTGGTGCGCAGCT TCCTCGACGTGTTTCCGCATGCGACGTTGTGGACCACCGAGTTGCACGAGATGATGCTGGTCGGCTCGATGTCGCCGATC AAGCTGGATCCGGAGCGCATCCGCCAGCGTTTTGCCGAGCCCGAGGTGTCGGCGGCACTGCGCGCGGTGGGCGTGACGTC GACGGCTGCATTGCTCGCGACCTGGGTGACCGGCCGGGAAGGCCTGGAGCGCTACGCGGGCGATGCGCCCGCCGTGACCG ACGACCATCCTCGCATCGAATACGCGGGCTGGGTGCGGCGCACGGAGTTTCCGCAGGTCCTGCAGCGGCTGCTGACGCTG CAGACTGAGCCGCCGCTGGCGGAGGCCGACGCGGCGCTGATCTCCGACATCGGACTCGAACGCGAAACGCTGCACACCTT CTACACGGCCGGTCTCGACGCCTACTACGGTGACCGCGAGGCCTGGGCGCTGCATATGAACAAGGTGATGCGCACCGATC CCGACAATCCGTACTACGCCTGGTTCGGCGGTGGCCGCCGCGCCGCCGCCCCATCGAGGAATCCCCAATGA
Upstream 100 bases:
>100_bases GATGAAGTCCATTGACAAGGGGGCTGCCGGGGCCGGGAAGTAATTCCAGCAGCAATGGTTGGCCGGGCTGTCCCGGCCAA CCGCTTCACAGGATCGCGAC
Downstream 100 bases:
>100_bases GCACCCGTGACGACGTGCTGGCGCTGCAGCAGCGGATGGGCGAGTCCATCGTCGGCCAGCAGCATATGGTCGAGCGCCTG TTGCTTGGCCTGCTGGCCGA
Product: spermine synthase
Products: NA
Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MREAHAGTDAGKQQARHRSGKSRRTQGAAVQAGQGQLAQHGALLAPALLLFASGAAGLIYQVLWIKQLALVVGVDVHAVT TAVSAFFAGLALGGWLFGRVADRHARPLRLYAWLEIGVLVLAIGATLLLARSAAPFAWLESRVGLLAWALPFVLVILPAA AMGGTLPVLMRVLASRAGQVGTHGGRLYAANTTGAIAGTLLAGFVLIPWLGITGSALAAATLNGVAAIAAFAMASRAVAT EASAADPVPASAQPARDAGGGRLALVLYAAAGGIALGYEVVWSQAIVQFISTRTFAFTVVLATYLAGLAIGSALAARRAD RVRDPWGAFAMLIAAAGLVALLEIVVLGEWLLLAQAAVSAWVQSATSNGLAAACASFAVAALCVVFVPTLLLGAAFPFVL RVGVDNHRLGSGVGAVVALNTLGGIAGTAVAGFVLVPRIGLVHALSLLAVGAGIVGVIAVALGSGVHKLARWAVPMVALL AVITAALAPADRLATLLARARGGEIAFYEEGRGATVAVVKQASATHTFNRLYIQGVSNSGDTMTSLRYMRLQALLPLIVH GGTPRSVLVIGLGTGITAGATLPYPGLEHRVVAELLPPVLRAVPQFQGNYNVAGDKRVDIRLRDGRRELLQSEQRYDLIT LEPPPPSAAGVVNLYSTDFYKLAAARLQPGGLVAQWLPLPTQNDEDTRALVRSFLDVFPHATLWTTELHEMMLVGSMSPI KLDPERIRQRFAEPEVSAALRAVGVTSTAALLATWVTGREGLERYAGDAPAVTDDHPRIEYAGWVRRTEFPQVLQRLLTL QTEPPLAEADAALISDIGLERETLHTFYTAGLDAYYGDREAWALHMNKVMRTDPDNPYYAWFGGGRRAAAPSRNPQ
Sequences:
>Translated_876_residues MREAHAGTDAGKQQARHRSGKSRRTQGAAVQAGQGQLAQHGALLAPALLLFASGAAGLIYQVLWIKQLALVVGVDVHAVT TAVSAFFAGLALGGWLFGRVADRHARPLRLYAWLEIGVLVLAIGATLLLARSAAPFAWLESRVGLLAWALPFVLVILPAA AMGGTLPVLMRVLASRAGQVGTHGGRLYAANTTGAIAGTLLAGFVLIPWLGITGSALAAATLNGVAAIAAFAMASRAVAT EASAADPVPASAQPARDAGGGRLALVLYAAAGGIALGYEVVWSQAIVQFISTRTFAFTVVLATYLAGLAIGSALAARRAD RVRDPWGAFAMLIAAAGLVALLEIVVLGEWLLLAQAAVSAWVQSATSNGLAAACASFAVAALCVVFVPTLLLGAAFPFVL RVGVDNHRLGSGVGAVVALNTLGGIAGTAVAGFVLVPRIGLVHALSLLAVGAGIVGVIAVALGSGVHKLARWAVPMVALL AVITAALAPADRLATLLARARGGEIAFYEEGRGATVAVVKQASATHTFNRLYIQGVSNSGDTMTSLRYMRLQALLPLIVH GGTPRSVLVIGLGTGITAGATLPYPGLEHRVVAELLPPVLRAVPQFQGNYNVAGDKRVDIRLRDGRRELLQSEQRYDLIT LEPPPPSAAGVVNLYSTDFYKLAAARLQPGGLVAQWLPLPTQNDEDTRALVRSFLDVFPHATLWTTELHEMMLVGSMSPI KLDPERIRQRFAEPEVSAALRAVGVTSTAALLATWVTGREGLERYAGDAPAVTDDHPRIEYAGWVRRTEFPQVLQRLLTL QTEPPLAEADAALISDIGLERETLHTFYTAGLDAYYGDREAWALHMNKVMRTDPDNPYYAWFGGGRRAAAPSRNPQ >Mature_876_residues MREAHAGTDAGKQQARHRSGKSRRTQGAAVQAGQGQLAQHGALLAPALLLFASGAAGLIYQVLWIKQLALVVGVDVHAVT TAVSAFFAGLALGGWLFGRVADRHARPLRLYAWLEIGVLVLAIGATLLLARSAAPFAWLESRVGLLAWALPFVLVILPAA AMGGTLPVLMRVLASRAGQVGTHGGRLYAANTTGAIAGTLLAGFVLIPWLGITGSALAAATLNGVAAIAAFAMASRAVAT EASAADPVPASAQPARDAGGGRLALVLYAAAGGIALGYEVVWSQAIVQFISTRTFAFTVVLATYLAGLAIGSALAARRAD RVRDPWGAFAMLIAAAGLVALLEIVVLGEWLLLAQAAVSAWVQSATSNGLAAACASFAVAALCVVFVPTLLLGAAFPFVL RVGVDNHRLGSGVGAVVALNTLGGIAGTAVAGFVLVPRIGLVHALSLLAVGAGIVGVIAVALGSGVHKLARWAVPMVALL AVITAALAPADRLATLLARARGGEIAFYEEGRGATVAVVKQASATHTFNRLYIQGVSNSGDTMTSLRYMRLQALLPLIVH GGTPRSVLVIGLGTGITAGATLPYPGLEHRVVAELLPPVLRAVPQFQGNYNVAGDKRVDIRLRDGRRELLQSEQRYDLIT LEPPPPSAAGVVNLYSTDFYKLAAARLQPGGLVAQWLPLPTQNDEDTRALVRSFLDVFPHATLWTTELHEMMLVGSMSPI KLDPERIRQRFAEPEVSAALRAVGVTSTAALLATWVTGREGLERYAGDAPAVTDDHPRIEYAGWVRRTEFPQVLQRLLTL QTEPPLAEADAALISDIGLERETLHTFYTAGLDAYYGDREAWALHMNKVMRTDPDNPYYAWFGGGRRAAAPSRNPQ
Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spermidine/spermine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001045 [H]
Pfam domain/function: PF01564 Spermine_synth [H]
EC number: =2.5.1.16 [H]
Molecular weight: Translated: 91853; Mature: 91853
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREAHAGTDAGKQQARHRSGKSRRTQGAAVQAGQGQLAQHGALLAPALLLFASGAAGLIY CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHCCCHHHHH QVLWIKQLALVVGVDVHAVTTAVSAFFAGLALGGWLFGRVADRHARPLRLYAWLEIGVLV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH LAIGATLLLARSAAPFAWLESRVGLLAWALPFVLVILPAAAMGGTLPVLMRVLASRAGQV HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GTHGGRLYAANTTGAIAGTLLAGFVLIPWLGITGSALAAATLNGVAAIAAFAMASRAVAT CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EASAADPVPASAQPARDAGGGRLALVLYAAAGGIALGYEVVWSQAIVQFISTRTFAFTVV CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LATYLAGLAIGSALAARRADRVRDPWGAFAMLIAAAGLVALLEIVVLGEWLLLAQAAVSA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVQSATSNGLAAACASFAVAALCVVFVPTLLLGAAFPFVLRVGVDNHRLGSGVGAVVALN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHH TLGGIAGTAVAGFVLVPRIGLVHALSLLAVGAGIVGVIAVALGSGVHKLARWAVPMVALL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AVITAALAPADRLATLLARARGGEIAFYEEGRGATVAVVKQASATHTFNRLYIQGVSNSG HHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHEEEEEEEECCCCC DTMTSLRYMRLQALLPLIVHGGTPRSVLVIGLGTGITAGATLPYPGLEHRVVAELLPPVL CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH RAVPQFQGNYNVAGDKRVDIRLRDGRRELLQSEQRYDLITLEPPPPSAAGVVNLYSTDFY HHHHCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCHHH KLAAARLQPGGLVAQWLPLPTQNDEDTRALVRSFLDVFPHATLWTTELHEMMLVGSMSPI HHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCC KLDPERIRQRFAEPEVSAALRAVGVTSTAALLATWVTGREGLERYAGDAPAVTDDHPRIE CCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCEE YAGWVRRTEFPQVLQRLLTLQTEPPLAEADAALISDIGLERETLHTFYTAGLDAYYGDRE HHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCH AWALHMNKVMRTDPDNPYYAWFGGGRRAAAPSRNPQ HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MREAHAGTDAGKQQARHRSGKSRRTQGAAVQAGQGQLAQHGALLAPALLLFASGAAGLIY CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHCCCHHHHH QVLWIKQLALVVGVDVHAVTTAVSAFFAGLALGGWLFGRVADRHARPLRLYAWLEIGVLV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH LAIGATLLLARSAAPFAWLESRVGLLAWALPFVLVILPAAAMGGTLPVLMRVLASRAGQV HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GTHGGRLYAANTTGAIAGTLLAGFVLIPWLGITGSALAAATLNGVAAIAAFAMASRAVAT CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EASAADPVPASAQPARDAGGGRLALVLYAAAGGIALGYEVVWSQAIVQFISTRTFAFTVV CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LATYLAGLAIGSALAARRADRVRDPWGAFAMLIAAAGLVALLEIVVLGEWLLLAQAAVSA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVQSATSNGLAAACASFAVAALCVVFVPTLLLGAAFPFVLRVGVDNHRLGSGVGAVVALN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHH TLGGIAGTAVAGFVLVPRIGLVHALSLLAVGAGIVGVIAVALGSGVHKLARWAVPMVALL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AVITAALAPADRLATLLARARGGEIAFYEEGRGATVAVVKQASATHTFNRLYIQGVSNSG HHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHEEEEEEEECCCCC DTMTSLRYMRLQALLPLIVHGGTPRSVLVIGLGTGITAGATLPYPGLEHRVVAELLPPVL CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH RAVPQFQGNYNVAGDKRVDIRLRDGRRELLQSEQRYDLITLEPPPPSAAGVVNLYSTDFY HHHHCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEECCCCCCCCCEEEECCCHHH KLAAARLQPGGLVAQWLPLPTQNDEDTRALVRSFLDVFPHATLWTTELHEMMLVGSMSPI HHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCC KLDPERIRQRFAEPEVSAALRAVGVTSTAALLATWVTGREGLERYAGDAPAVTDDHPRIE CCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCEE YAGWVRRTEFPQVLQRLLTLQTEPPLAEADAALISDIGLERETLHTFYTAGLDAYYGDRE HHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCH AWALHMNKVMRTDPDNPYYAWFGGGRRAAAPSRNPQ HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]