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The map label for this gene is omlA [H]

Identifier: 73542521

GI number: 73542521

Start: 3109243

End: 3109866

Strand: Reverse

Name: omlA [H]

Synonym: Reut_A2836

Alternate gene names: 73542521

Gene position: 3109866-3109243 (Counterclockwise)

Preceding gene: 73542523

Following gene: 73542520

Centisome position: 81.7

GC content: 62.82

Gene sequence:

>624_bases
ATGCGTTCATTCCGTTCGTCTGCCATGCGTCCGACGCTGGTGATTTCCCTGCTGGCTGCGGCGCTTCTGGCCGGTGCCTG
CTCGACCTACGACTCCACTTCGCGCAAGCTCACAAACGCCATTACGCCGTATCGGATCAATATCGTGCAGGGCAACTTCG
TCTCGCGTGAGGCGGCTTCGCAACTGCACGAGGGCATGACCCGCGACCAGGTCAAATTCCTGCTCGGTACGCCACTGCTG
ACCGACGTCTTCCATGCCGATCGCTGGGACTACGTGTTCTCATTCCGCCGTGGCAATGCAGCGATTGTCCAGCAGCGCCG
CTTTACCGTTTACTTTGACGGCGACAAGCTGGTGAAGTTTGGCGGTGACGAACTGCCGTCCGAATACGAGCTGATTGCCG
AAATCGATGGCATGAAAAAGGCACTGAAAGACCAGAAACCGGGCATCGGCGGCAGTGCCAGCAGCCAGGCAGCAACAGCG
CCGGCGGCAACACCCGCTGCCCCGCAAGACGCTCCGGCGGCACCCACCGAACCGCAGGCGGTCGCTCCGGAGACTTCCGC
CGCCACGCCGGCCGCCCAGCCGGCCGCCGCTACGCAGCCTGAATCCGCTCCACAGTCCAACTGA

Upstream 100 bases:

>100_bases
AGGCGGCTTCCGCCCGCCGGACGCCGTGGCAGCCCAGACAGCCGCCGCGCGGCGGAAATGTCCCTGTCGGCACTTTCCTT
TCCCTCTGGAAGCGAGATAC

Downstream 100 bases:

>100_bases
AGCGCGCTTCAGGCGCGTGAGGCAACCCGCAACGGTTGCCACCATGATTCCCGGCCGGCGCTTTGCGACCGGCCGTTTTC
CGATTTCGCCAGGTAAAACA

Product: SmpA/OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRSFRSSAMRPTLVISLLAAALLAGACSTYDSTSRKLTNAITPYRINIVQGNFVSREAASQLHEGMTRDQVKFLLGTPLL
TDVFHADRWDYVFSFRRGNAAIVQQRRFTVYFDGDKLVKFGGDELPSEYELIAEIDGMKKALKDQKPGIGGSASSQAATA
PAATPAAPQDAPAAPTEPQAVAPETSAATPAAQPAAATQPESAPQSN

Sequences:

>Translated_207_residues
MRSFRSSAMRPTLVISLLAAALLAGACSTYDSTSRKLTNAITPYRINIVQGNFVSREAASQLHEGMTRDQVKFLLGTPLL
TDVFHADRWDYVFSFRRGNAAIVQQRRFTVYFDGDKLVKFGGDELPSEYELIAEIDGMKKALKDQKPGIGGSASSQAATA
PAATPAAPQDAPAAPTEPQAVAPETSAATPAAQPAAATQPESAPQSN
>Mature_207_residues
MRSFRSSAMRPTLVISLLAAALLAGACSTYDSTSRKLTNAITPYRINIVQGNFVSREAASQLHEGMTRDQVKFLLGTPLL
TDVFHADRWDYVFSFRRGNAAIVQQRRFTVYFDGDKLVKFGGDELPSEYELIAEIDGMKKALKDQKPGIGGSASSQAATA
PAATPAAPQDAPAAPTEPQAVAPETSAATPAAQPAAATQPESAPQSN

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 22000; Mature: 22000

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFRSSAMRPTLVISLLAAALLAGACSTYDSTSRKLTNAITPYRINIVQGNFVSREAAS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHH
QLHEGMTRDQVKFLLGTPLLTDVFHADRWDYVFSFRRGNAAIVQQRRFTVYFDGDKLVKF
HHHCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCEEEECCEEEEEECCCEEEEC
GGDELPSEYELIAEIDGMKKALKDQKPGIGGSASSQAATAPAATPAAPQDAPAAPTEPQA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VAPETSAATPAAQPAAATQPESAPQSN
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSFRSSAMRPTLVISLLAAALLAGACSTYDSTSRKLTNAITPYRINIVQGNFVSREAAS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHH
QLHEGMTRDQVKFLLGTPLLTDVFHADRWDYVFSFRRGNAAIVQQRRFTVYFDGDKLVKF
HHHCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCEEEECCEEEEEECCCEEEEC
GGDELPSEYELIAEIDGMKKALKDQKPGIGGSASSQAATAPAATPAAPQDAPAAPTEPQA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VAPETSAATPAAQPAAATQPESAPQSN
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]