| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is iorB [H]
Identifier: 73542346
GI number: 73542346
Start: 2919387
End: 2921651
Strand: Reverse
Name: iorB [H]
Synonym: Reut_A2661
Alternate gene names: 73542346
Gene position: 2921651-2919387 (Counterclockwise)
Preceding gene: 73542347
Following gene: 73542345
Centisome position: 76.75
GC content: 67.95
Gene sequence:
>2265_bases ATGCGTATTCGTGGACTCGAAGCACTCGCCGGCGCCAGCAGCGCGCAGGGAAGCAATACTGGCAGCGCCGGTGATCACGG CGTGGCAACGCTGAATCGCCGCAGCTTCCTCAAGCTGACCGGCCTGGCCGGCGGCGGCCTTGCACTGGGCGTGACGCCGC TTGCGCAGGCGCAAGAAGGCGGCGCACCGAAGGCGCCGCCTTCGGCGCCACAGGCGTTCGTGGTGATTTCGCCGGACAAC ACGGTAACCATCGCGGTGAACCGGCTGGAGTTCGGCCAGGGCGTACACACGGCGCTGCCCATGGCGCTTGCCGAAGAGCT GGATGTCGACTGGCGCAACGTGCGCGCAGCGCTCGCGCCCGCCGGTGATGCGTACAAGGACCCGGGCTTCGGCATGCAGA TGACCGGCGGTTCCACGGCCATCAACCATTCCTTCCAGCAATATCGTGAGCTGGGCGCGCGTGCCCGCGCCATGCTGGTC ACGGCTGCGGCGCAGCAGTGGAAAGTGGATCCCGCAAGCTGCAAGGTCGAGCAGGGCGTGGTGACCTCGGGCAGCCAGCG TGCCACCTTCGGCGAACTGGCCCCGGCGGCCATGGAACTGCCCGTACCGAAAGACGTGCGCCTGAAGGACCCTTCGCAAT TCCGGCTGATCGGCAAGCCGACGCCGCGGCTCGATGCGCGCAGCAAGCTCGAAGGCAAGCCCGCCTTCGGTATCGACACG CGCCTGAAGGACATGATGGTGGCCGTGGTGGCGCGTCCACCGCGCTTTGGCGGGAAGGTCAAGTCGTTCAATGCCGACAA GGCGCGCGCGATCAAGGGTGTCAGCGACGTGATGCTGGTACCGGTCGATCGCGGCGGCACCGGCGTGGCCGTGGTCGCTG ACGGCTACTGGCCCGCGAAGCAGGCGCGCGATGCGCTGCAAATCGAATGGGAGGATGCCGGCTCGAAGGTGTCGACGCAG GCCCTGTTCGAGGAGTACGCGAAGCTCGCCGCCCAGCCCGGCACCGTGGCGCGCGCCGGCGAAGGCGATGTGGCCGCAGC CGTGAATGGCGCGGCGCGCAAGATCGACGCCGAGTACCGCTTCCCGTATCTGGCCCATGCGCCGATGGAGCCGCTGAACT GCACGCTGCAGCCGGAAGTGCTGGCGAACAAGGTGCAGAGCGTCAAGGTGTGGGTCGGCTCGCAGTTCCAGACCGTGGAC CAGGCCGCCATCGCGCGCGTGCTCGAGCTGAGCCCGGACAAGGTGACACTCAACACCATGATGGCAGGTGGCGGCTTCGG CCGCCGCGCGGTGCCCACGTCGGACTACCTCGTGGAAGCCGCCAACGTGCTGCGCACCTGGGTGGCGAACGGCCACACCG AGCCGCTCAAGATCGTGTGGAGCCGCGAGGACGATATCCGCGGCGGCTACTACCGGCCGCTCCACGTGCACCGCGCACGT ATCGGCCTGGATGCGCAGGGCAAAGTGGTGGGCTGGCAGCACACCATCGTCGGCCAGTCGATCCTGAAGGGCACGCCGTT CGAGCCGTTCATGGTCAAGAACGGCGTGGACGCGACCATGAGCGAAGGCCTGGTCGAGAATGACTACAACCTGCCGATGC GGCTTGCGGTGCATCACCCGCAGGTCGATGTGCCGGTGCTGTGGTGGCGCTCGGTCGGCAACACGCACACGGCCTACGTC AAGGAAACGCTGGTCGACGAAATGGCCGCGGCCGCGAAGCAGGACCCCGTGGCCTTCCGCCTGGCGCGGCTCGACGAAAG CAAGCACGCGCGCCATCGCGCCGCGCTGCAGCTCGCGGTGCAGAAGTCGGGCTATGGCAAGCGCAAGCTGCCCAAGGGGC AAGCGTGGGGCGTGGCGGTGCATGAGTCGTTCAACTCGGTGGTGGCCTATGTGGCGGAGGTTTCGCTCGTCAAGGGCGAG CCGCGCGTGCATCGCGTGACTGCCGGCGTGCATGCCAACCGCGTGGTCAATCCCTTGTCGGCTGAGGCGCAGATCCAGGG CGCCTGCGTCTTCGGGCTGGCGATGACGCGGCCCGGGTTCGCCATCGAGATCGAGAACGGCGTGGTGAAGAACAGCAACT TCCCTGACTATCCGCCGCCGCGCATCACCGATGCGCCCGTGGTGGACGTGTTCTTCGTGCCATCGCAGGACCCGCCCACG GGTCTTGGCGAACCGGGCGTGCCGCCGATCGCCCCGGCCGTCGCCAACGCGCTGTTCGTGCTCACGGGCAAGCGCCAGCG CCAGCTGCCGTTCGTGCTGACCTGA
Upstream 100 bases:
>100_bases GGCCATGGCCGGAAACCTGTGCCGCTGCGGCACCTACCAACGCATCCGGGCCGCGATCAAAGACGCGGCCCGCGCGCTGG CCTGAGCGGAGGTGCCTGAC
Downstream 100 bases:
>100_bases GCGCGCCCCGCGCCGGAGGAGCATGCCGCCTCCGGCGCTTCCGGGCCTCGCTGCCTGGACGCCCGCGCCAACACCAGCGG CGCGGGCTGCGCATCACCCG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MRIRGLEALAGASSAQGSNTGSAGDHGVATLNRRSFLKLTGLAGGGLALGVTPLAQAQEGGAPKAPPSAPQAFVVISPDN TVTIAVNRLEFGQGVHTALPMALAEELDVDWRNVRAALAPAGDAYKDPGFGMQMTGGSTAINHSFQQYRELGARARAMLV TAAAQQWKVDPASCKVEQGVVTSGSQRATFGELAPAAMELPVPKDVRLKDPSQFRLIGKPTPRLDARSKLEGKPAFGIDT RLKDMMVAVVARPPRFGGKVKSFNADKARAIKGVSDVMLVPVDRGGTGVAVVADGYWPAKQARDALQIEWEDAGSKVSTQ ALFEEYAKLAAQPGTVARAGEGDVAAAVNGAARKIDAEYRFPYLAHAPMEPLNCTLQPEVLANKVQSVKVWVGSQFQTVD QAAIARVLELSPDKVTLNTMMAGGGFGRRAVPTSDYLVEAANVLRTWVANGHTEPLKIVWSREDDIRGGYYRPLHVHRAR IGLDAQGKVVGWQHTIVGQSILKGTPFEPFMVKNGVDATMSEGLVENDYNLPMRLAVHHPQVDVPVLWWRSVGNTHTAYV KETLVDEMAAAAKQDPVAFRLARLDESKHARHRAALQLAVQKSGYGKRKLPKGQAWGVAVHESFNSVVAYVAEVSLVKGE PRVHRVTAGVHANRVVNPLSAEAQIQGACVFGLAMTRPGFAIEIENGVVKNSNFPDYPPPRITDAPVVDVFFVPSQDPPT GLGEPGVPPIAPAVANALFVLTGKRQRQLPFVLT
Sequences:
>Translated_754_residues MRIRGLEALAGASSAQGSNTGSAGDHGVATLNRRSFLKLTGLAGGGLALGVTPLAQAQEGGAPKAPPSAPQAFVVISPDN TVTIAVNRLEFGQGVHTALPMALAEELDVDWRNVRAALAPAGDAYKDPGFGMQMTGGSTAINHSFQQYRELGARARAMLV TAAAQQWKVDPASCKVEQGVVTSGSQRATFGELAPAAMELPVPKDVRLKDPSQFRLIGKPTPRLDARSKLEGKPAFGIDT RLKDMMVAVVARPPRFGGKVKSFNADKARAIKGVSDVMLVPVDRGGTGVAVVADGYWPAKQARDALQIEWEDAGSKVSTQ ALFEEYAKLAAQPGTVARAGEGDVAAAVNGAARKIDAEYRFPYLAHAPMEPLNCTLQPEVLANKVQSVKVWVGSQFQTVD QAAIARVLELSPDKVTLNTMMAGGGFGRRAVPTSDYLVEAANVLRTWVANGHTEPLKIVWSREDDIRGGYYRPLHVHRAR IGLDAQGKVVGWQHTIVGQSILKGTPFEPFMVKNGVDATMSEGLVENDYNLPMRLAVHHPQVDVPVLWWRSVGNTHTAYV KETLVDEMAAAAKQDPVAFRLARLDESKHARHRAALQLAVQKSGYGKRKLPKGQAWGVAVHESFNSVVAYVAEVSLVKGE PRVHRVTAGVHANRVVNPLSAEAQIQGACVFGLAMTRPGFAIEIENGVVKNSNFPDYPPPRITDAPVVDVFFVPSQDPPT GLGEPGVPPIAPAVANALFVLTGKRQRQLPFVLT >Mature_754_residues MRIRGLEALAGASSAQGSNTGSAGDHGVATLNRRSFLKLTGLAGGGLALGVTPLAQAQEGGAPKAPPSAPQAFVVISPDN TVTIAVNRLEFGQGVHTALPMALAEELDVDWRNVRAALAPAGDAYKDPGFGMQMTGGSTAINHSFQQYRELGARARAMLV TAAAQQWKVDPASCKVEQGVVTSGSQRATFGELAPAAMELPVPKDVRLKDPSQFRLIGKPTPRLDARSKLEGKPAFGIDT RLKDMMVAVVARPPRFGGKVKSFNADKARAIKGVSDVMLVPVDRGGTGVAVVADGYWPAKQARDALQIEWEDAGSKVSTQ ALFEEYAKLAAQPGTVARAGEGDVAAAVNGAARKIDAEYRFPYLAHAPMEPLNCTLQPEVLANKVQSVKVWVGSQFQTVD QAAIARVLELSPDKVTLNTMMAGGGFGRRAVPTSDYLVEAANVLRTWVANGHTEPLKIVWSREDDIRGGYYRPLHVHRAR IGLDAQGKVVGWQHTIVGQSILKGTPFEPFMVKNGVDATMSEGLVENDYNLPMRLAVHHPQVDVPVLWWRSVGNTHTAYV KETLVDEMAAAAKQDPVAFRLARLDESKHARHRAALQLAVQKSGYGKRKLPKGQAWGVAVHESFNSVVAYVAEVSLVKGE PRVHRVTAGVHANRVVNPLSAEAQIQGACVFGLAMTRPGFAIEIENGVVKNSNFPDYPPPRITDAPVVDVFFVPSQDPPT GLGEPGVPPIAPAVANALFVLTGKRQRQLPFVLT
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=122, Percent_Identity=33.6065573770492, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 80594; Mature: 80594
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRGLEALAGASSAQGSNTGSAGDHGVATLNRRSFLKLTGLAGGGLALGVTPLAQAQEG CCCCCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEECCCCHHHHHCC GAPKAPPSAPQAFVVISPDNTVTIAVNRLEFGQGVHTALPMALAEELDVDWRNVRAALAP CCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHEEECC AGDAYKDPGFGMQMTGGSTAINHSFQQYRELGARARAMLVTAAAQQWKVDPASCKVEQGV CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHCEEECCE VTSGSQRATFGELAPAAMELPVPKDVRLKDPSQFRLIGKPTPRLDARSKLEGKPAFGIDT ECCCCCCCCHHHCCCHHEECCCCCCCEECCCCCEEEECCCCCCCCCHHCCCCCCCCCCCH RLKDMMVAVVARPPRFGGKVKSFNADKARAIKGVSDVMLVPVDRGGTGVAVVADGYWPAK HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHH QARDALQIEWEDAGSKVSTQALFEEYAKLAAQPGTVARAGEGDVAAAVNGAARKIDAEYR HCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCHHHEECCCCC FPYLAHAPMEPLNCTLQPEVLANKVQSVKVWVGSQFQTVDQAAIARVLELSPDKVTLNTM CCEEECCCCCCCCCEECHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEE MAGGGFGRRAVPTSDYLVEAANVLRTWVANGHTEPLKIVWSREDDIRGGYYRPLHVHRAR EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCEEEEEEE IGLDAQGKVVGWQHTIVGQSILKGTPFEPFMVKNGVDATMSEGLVENDYNLPMRLAVHHP ECCCCCCCEEEEEHHHHHHHHHCCCCCCCEEECCCCCHHHHCCCCCCCCCCCEEEEEECC QVDVPVLWWRSVGNTHTAYVKETLVDEMAAAAKQDPVAFRLARLDESKHARHRAALQLAV CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEE QKSGYGKRKLPKGQAWGVAVHESFNSVVAYVAEVSLVKGEPRVHRVTAGVHANRVVNPLS HHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHCCCCC AEAQIQGACVFGLAMTRPGFAIEIENGVVKNSNFPDYPPPRITDAPVVDVFFVPSQDPPT CCCEECCEEEEEEEECCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC GLGEPGVPPIAPAVANALFVLTGKRQRQLPFVLT CCCCCCCCCCHHHHCCEEEEEECCCCCCCCCEEC >Mature Secondary Structure MRIRGLEALAGASSAQGSNTGSAGDHGVATLNRRSFLKLTGLAGGGLALGVTPLAQAQEG CCCCCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEECCCCHHHHHCC GAPKAPPSAPQAFVVISPDNTVTIAVNRLEFGQGVHTALPMALAEELDVDWRNVRAALAP CCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHEEECC AGDAYKDPGFGMQMTGGSTAINHSFQQYRELGARARAMLVTAAAQQWKVDPASCKVEQGV CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHCEEECCE VTSGSQRATFGELAPAAMELPVPKDVRLKDPSQFRLIGKPTPRLDARSKLEGKPAFGIDT ECCCCCCCCHHHCCCHHEECCCCCCCEECCCCCEEEECCCCCCCCCHHCCCCCCCCCCCH RLKDMMVAVVARPPRFGGKVKSFNADKARAIKGVSDVMLVPVDRGGTGVAVVADGYWPAK HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHH QARDALQIEWEDAGSKVSTQALFEEYAKLAAQPGTVARAGEGDVAAAVNGAARKIDAEYR HCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCHHHEECCCCC FPYLAHAPMEPLNCTLQPEVLANKVQSVKVWVGSQFQTVDQAAIARVLELSPDKVTLNTM CCEEECCCCCCCCCEECHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEE MAGGGFGRRAVPTSDYLVEAANVLRTWVANGHTEPLKIVWSREDDIRGGYYRPLHVHRAR EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCEEEEEEE IGLDAQGKVVGWQHTIVGQSILKGTPFEPFMVKNGVDATMSEGLVENDYNLPMRLAVHHP ECCCCCCCEEEEEHHHHHHHHHCCCCCCCEEECCCCCHHHHCCCCCCCCCCCEEEEEECC QVDVPVLWWRSVGNTHTAYVKETLVDEMAAAAKQDPVAFRLARLDESKHARHRAALQLAV CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEE QKSGYGKRKLPKGQAWGVAVHESFNSVVAYVAEVSLVKGEPRVHRVTAGVHANRVVNPLS HHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHCCCCC AEAQIQGACVFGLAMTRPGFAIEIENGVVKNSNFPDYPPPRITDAPVVDVFFVPSQDPPT CCCEECCEEEEEEEECCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC GLGEPGVPPIAPAVANALFVLTGKRQRQLPFVLT CCCCCCCCCCHHHHCCEEEEEECCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]