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The map label for this gene is yecS [H]

Identifier: 73542272

GI number: 73542272

Start: 2837790

End: 2838494

Strand: Reverse

Name: yecS [H]

Synonym: Reut_A2587

Alternate gene names: 73542272

Gene position: 2838494-2837790 (Counterclockwise)

Preceding gene: 73542273

Following gene: 73542269

Centisome position: 74.57

GC content: 64.11

Gene sequence:

>705_bases
ATGCGGGCAATCCGTATGATGCGTGCTTTTTCCGGCGACCTTCCTATGTCCGCGCTCCAGCTCATCTCCGATTCCATGCC
CGTGCTGCTGCAGGGCACGCTACTGACCATCAAGTTCGCGCTGTGGTCGATGGCCTTCGGGCTGGTGCTGGGCATGGTCG
TGGCGCTCATGGGCATCAGCCACAACCCCGTGCTGAAGGGCATCGCACGCACGTACGTCAGCATCATGCGCGGCACGCCG
CTGCTGGTGCAGATCTTTGTCGTCTACTACGGCTTGCCCGGTATCGGCGTCGCGCTGGAGCCGACGCCTGCGGGCGTACT
GACGCTGAGCCTCAATGTGGGCGCATATTTGTCCGAGAGCATGCGCGGGGCGATTCTCGGCATTGCGCGCGGGCAGTGGC
TCGCGGCCTATAGCCTTGGGCTGACGCCCGGCCAGACACTGCGTTACGTGGTCGGCCCGCAGGCCCTGCGTCTTGCGGTG
CCGAGTCTTTCCAACAGCCTGATCAGCCTGATCAAGGACACCTCGCTGGTGTCGGTCATTACCGTGACGGAGCTGTTGCG
CACGGCGCAGGAGGTCATTGCGGCGACTTATCAGCCGTTGCCGCTTTATCTTGCGGTGGCGGCGATCTACTGGGTGCTCA
GCACCGGGCTGTCGGGACTGCAGCATGTGCTGGAGCGCAGGCTGTCGTTGCCGGGCCGCCACTGA

Upstream 100 bases:

>100_bases
GTGAAGTGGTTCGGGTCGGACGTGACCAAGCCCGGCAAGTAAAACCGCAACCTGTCATACGACACCCCGCCCGGCCACAG
GCTGCGCGGGGTTTGCGCGC

Downstream 100 bases:

>100_bases
ACTGAGGCGCAGCAAACAAGAAGGGCCAGCCCGGTGGGCTGGCCCATCGTACCTCCGGGATATCCGCGCTTAACCCTGCG
CGACGCGCCCGGCGATATGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRAIRMMRAFSGDLPMSALQLISDSMPVLLQGTLLTIKFALWSMAFGLVLGMVVALMGISHNPVLKGIARTYVSIMRGTP
LLVQIFVVYYGLPGIGVALEPTPAGVLTLSLNVGAYLSESMRGAILGIARGQWLAAYSLGLTPGQTLRYVVGPQALRLAV
PSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLSLPGRH

Sequences:

>Translated_234_residues
MRAIRMMRAFSGDLPMSALQLISDSMPVLLQGTLLTIKFALWSMAFGLVLGMVVALMGISHNPVLKGIARTYVSIMRGTP
LLVQIFVVYYGLPGIGVALEPTPAGVLTLSLNVGAYLSESMRGAILGIARGQWLAAYSLGLTPGQTLRYVVGPQALRLAV
PSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLSLPGRH
>Mature_234_residues
MRAIRMMRAFSGDLPMSALQLISDSMPVLLQGTLLTIKFALWSMAFGLVLGMVVALMGISHNPVLKGIARTYVSIMRGTP
LLVQIFVVYYGLPGIGVALEPTPAGVLTLSLNVGAYLSESMRGAILGIARGQWLAAYSLGLTPGQTLRYVVGPQALRLAV
PSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLSLPGRH

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=47.2477064220183, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=36.9668246445498, Blast_Score=136, Evalue=9e-34,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=31.3084112149533, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=31.1627906976744, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=31.7535545023697, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=31.25, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=32.3671497584541, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=30.5555555555556, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=26.5116279069767, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI48994930, Length=168, Percent_Identity=30.3571428571429, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25071; Mature: 25071

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIRMMRAFSGDLPMSALQLISDSMPVLLQGTLLTIKFALWSMAFGLVLGMVVALMGIS
CHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HNPVLKGIARTYVSIMRGTPLLVQIFVVYYGLPGIGVALEPTPAGVLTLSLNVGAYLSES
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCHHHHHH
MRGAILGIARGQWLAAYSLGLTPGQTLRYVVGPQALRLAVPSLSNSLISLIKDTSLVSVI
HHHHHEEECCCCEEEHEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVTELLRTAQEVIAATYQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLSLPGRH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRAIRMMRAFSGDLPMSALQLISDSMPVLLQGTLLTIKFALWSMAFGLVLGMVVALMGIS
CHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HNPVLKGIARTYVSIMRGTPLLVQIFVVYYGLPGIGVALEPTPAGVLTLSLNVGAYLSES
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCHHHHHH
MRGAILGIARGQWLAAYSLGLTPGQTLRYVVGPQALRLAVPSLSNSLISLIKDTSLVSVI
HHHHHEEECCCCEEEHEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVTELLRTAQEVIAATYQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLSLPGRH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]