| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yjgR [H]
Identifier: 73542206
GI number: 73542206
Start: 2763230
End: 2764765
Strand: Reverse
Name: yjgR [H]
Synonym: Reut_A2521
Alternate gene names: 73542206
Gene position: 2764765-2763230 (Counterclockwise)
Preceding gene: 73542215
Following gene: 73542199
Centisome position: 72.63
GC content: 65.1
Gene sequence:
>1536_bases ATGGCCGAACCTATCCTGATCGCCAAAAATGCCGAGCTTGAACTGGCCTTGCTGCCACAAATGGGCAACCGGCATGGCCT GATCACCGGCGCCACCGGCACCGGCAAGACCGTGACGCTGCAGACGCTCGCGCAGGGGTTCTCCCGGCTCGGCGTGCCAG TCTTCATGGCTGACGTCAAAGGTGATCTGACCGGCATTTCTCAGCCGGGACAGCCCAGCGACAAACTCAAGGCGCGGCTC GCAGAGCTGAATCTGCCCGAACCGGCCTGGGGCGGTTGCCCTACCACGTTGTGGGACGTATTCGGCCAGAAGGGGCACCC GGTCCGGGCGACGATCTCGCACATGGGCCCACTGCTGCTGTCGCGCATGCTGGAACTCAACGACACGCAGCAGGGCGTGC TGAATCTGGTGTTCCGCATTGCCGACGCGAACGGCCTGCTGCTGCTCGACGCCAAGGACCTGCGCGCGATGCTTCAGTAT GTGGGCGACAACGCGGCCCAATTCACGACCGAGTACGGCAATATCTCGGCGGCTTCCATCGGTGCCATCCAGCGCGGGCT GGTCGCGCTGGAGTCGCAGGGCGCGGACGTGTTCTTTGGCGAGCCCATGCTCAACCTGGAAGACTTCATCCAGACCGAGA AGGGCCAGGGCGTGGTCAACATCCTGGCGGCCGACAAGCTGATGAACTCGCCCAAGCTCTATGCCACGTTCCTGCTGTGG CTGCTGTCGGAGCTGTTCGAGAAGCTGCCAGAGGCCGGCGACCTCGAAAAGCCCAGGCTGGTCTTCTTCTTCGACGAGGC GCATCTGCTGTTCAACGACGCGCCCAAGGCGCTGCTCGACAAGATCGAGCAGGTGGTGAGGCTGATCCGCTCCAAGGGCG TCGGCGTGTATTTCGTCACGCAGAACCCCGTCGATATTCCGGACACCGTGCTGGGCCAACTCGGCAACCGGGTGCAGCAT GCGCTGCGCGCGTTCACGCCGCGCGACCAGAAGGCAGTCAAGGTCGCGGCCACGACCATGCGCGCCAATCCGAAGCTCAA TCTGGAAACGGTCATTGGAGAGTTGGGCGTGGGCGAGGCGCTGGTGTCGCTGCTCGACGCCAAGGGCACGCCGGGCGTGA CCGAGCGCGCATGGGTACTGGCACCGGGCAGCCGCATCGGCCCCATCACGGAGGACGAGCGCAAGCAACTGATCGCGACG TCGCTGGTGGCAGGTACGTATGAAAAGGCGATCGACCGGGAATCGGCCTACGAGAAACTGCGCGGCGGTGTGGCGTCGGC GGCAAACGGTGGTGGCAACGGCGGCACTTCCGTGCAAAAGCCGACAGGCGGCGCGCCGGCCGAAGAGGGCGGCTGGCTTG GTACCGCCGGCGAGATCTTCGGCTCGCTGACCAAGGGCACGGGCAAGACCGGCCGTGGCGATTCCATCCTCGAGTCGATG GCCAAGTCCGCCGCACGCACCGTCGGTTCTCAGGTCGGCCGCGAACTGATCCGTGGCGTGCTGGGCAGCCTGCTGGGCGG CGGCAAGAAGAAGTAA
Upstream 100 bases:
>100_bases TAGGCCCGGCTGCTGGCTATAATCAGCCCATGATTTTATCACGCGGCCCTGTTCGCGCCGCGCCTGTGGCCGCCTGCCAC GCTTCCCGTTCCGAGACACC
Downstream 100 bases:
>100_bases GCCCGTTCAGTGCGAGCCGGCCTGCGACGCAGGCCGGTTTCCCGCGGCGGCCTTCGCTGCTGCCGCGTCTTCGCGCATCT TGCGGCTGAACATCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MAEPILIAKNAELELALLPQMGNRHGLITGATGTGKTVTLQTLAQGFSRLGVPVFMADVKGDLTGISQPGQPSDKLKARL AELNLPEPAWGGCPTTLWDVFGQKGHPVRATISHMGPLLLSRMLELNDTQQGVLNLVFRIADANGLLLLDAKDLRAMLQY VGDNAAQFTTEYGNISAASIGAIQRGLVALESQGADVFFGEPMLNLEDFIQTEKGQGVVNILAADKLMNSPKLYATFLLW LLSELFEKLPEAGDLEKPRLVFFFDEAHLLFNDAPKALLDKIEQVVRLIRSKGVGVYFVTQNPVDIPDTVLGQLGNRVQH ALRAFTPRDQKAVKVAATTMRANPKLNLETVIGELGVGEALVSLLDAKGTPGVTERAWVLAPGSRIGPITEDERKQLIAT SLVAGTYEKAIDRESAYEKLRGGVASAANGGGNGGTSVQKPTGGAPAEEGGWLGTAGEIFGSLTKGTGKTGRGDSILESM AKSAARTVGSQVGRELIRGVLGSLLGGGKKK
Sequences:
>Translated_511_residues MAEPILIAKNAELELALLPQMGNRHGLITGATGTGKTVTLQTLAQGFSRLGVPVFMADVKGDLTGISQPGQPSDKLKARL AELNLPEPAWGGCPTTLWDVFGQKGHPVRATISHMGPLLLSRMLELNDTQQGVLNLVFRIADANGLLLLDAKDLRAMLQY VGDNAAQFTTEYGNISAASIGAIQRGLVALESQGADVFFGEPMLNLEDFIQTEKGQGVVNILAADKLMNSPKLYATFLLW LLSELFEKLPEAGDLEKPRLVFFFDEAHLLFNDAPKALLDKIEQVVRLIRSKGVGVYFVTQNPVDIPDTVLGQLGNRVQH ALRAFTPRDQKAVKVAATTMRANPKLNLETVIGELGVGEALVSLLDAKGTPGVTERAWVLAPGSRIGPITEDERKQLIAT SLVAGTYEKAIDRESAYEKLRGGVASAANGGGNGGTSVQKPTGGAPAEEGGWLGTAGEIFGSLTKGTGKTGRGDSILESM AKSAARTVGSQVGRELIRGVLGSLLGGGKKK >Mature_510_residues AEPILIAKNAELELALLPQMGNRHGLITGATGTGKTVTLQTLAQGFSRLGVPVFMADVKGDLTGISQPGQPSDKLKARLA ELNLPEPAWGGCPTTLWDVFGQKGHPVRATISHMGPLLLSRMLELNDTQQGVLNLVFRIADANGLLLLDAKDLRAMLQYV GDNAAQFTTEYGNISAASIGAIQRGLVALESQGADVFFGEPMLNLEDFIQTEKGQGVVNILAADKLMNSPKLYATFLLWL LSELFEKLPEAGDLEKPRLVFFFDEAHLLFNDAPKALLDKIEQVVRLIRSKGVGVYFVTQNPVDIPDTVLGQLGNRVQHA LRAFTPRDQKAVKVAATTMRANPKLNLETVIGELGVGEALVSLLDAKGTPGVTERAWVLAPGSRIGPITEDERKQLIATS LVAGTYEKAIDRESAYEKLRGGVASAANGGGNGGTSVQKPTGGAPAEEGGWLGTAGEIFGSLTKGTGKTGRGDSILESMA KSAARTVGSQVGRELIRGVLGSLLGGGKKK
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=511, Percent_Identity=62.8180039138943, Blast_Score=610, Evalue=1e-175,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 54134; Mature: 54003
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPILIAKNAELELALLPQMGNRHGLITGATGTGKTVTLQTLAQGFSRLGVPVFMADVK CCCCEEEECCCCEEEEECCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCEEEEEECC GDLTGISQPGQPSDKLKARLAELNLPEPAWGGCPTTLWDVFGQKGHPVRATISHMGPLLL CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH SRMLELNDTQQGVLNLVFRIADANGLLLLDAKDLRAMLQYVGDNAAQFTTEYGNISAASI HHHHHCCCHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHCCCHHHEEHHCCCCCHHHH GAIQRGLVALESQGADVFFGEPMLNLEDFIQTEKGQGVVNILAADKLMNSPKLYATFLLW HHHHHHHHHEECCCCEEEECCCCCCHHHHHHCCCCCCEEEEEEHHHHHCCCHHHHHHHHH LLSELFEKLPEAGDLEKPRLVFFFDEAHLLFNDAPKALLDKIEQVVRLIRSKGVGVYFVT HHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEE QNPVDIPDTVLGQLGNRVQHALRAFTPRDQKAVKVAATTMRANPKLNLETVIGELGVGEA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHH LVSLLDAKGTPGVTERAWVLAPGSRIGPITEDERKQLIATSLVAGTYEKAIDRESAYEKL HHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGGVASAANGGGNGGTSVQKPTGGAPAEEGGWLGTAGEIFGSLTKGTGKTGRGDSILESM HCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH AKSAARTVGSQVGRELIRGVLGSLLGGGKKK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AEPILIAKNAELELALLPQMGNRHGLITGATGTGKTVTLQTLAQGFSRLGVPVFMADVK CCCEEEECCCCEEEEECCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCEEEEEECC GDLTGISQPGQPSDKLKARLAELNLPEPAWGGCPTTLWDVFGQKGHPVRATISHMGPLLL CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH SRMLELNDTQQGVLNLVFRIADANGLLLLDAKDLRAMLQYVGDNAAQFTTEYGNISAASI HHHHHCCCHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHCCCHHHEEHHCCCCCHHHH GAIQRGLVALESQGADVFFGEPMLNLEDFIQTEKGQGVVNILAADKLMNSPKLYATFLLW HHHHHHHHHEECCCCEEEECCCCCCHHHHHHCCCCCCEEEEEEHHHHHCCCHHHHHHHHH LLSELFEKLPEAGDLEKPRLVFFFDEAHLLFNDAPKALLDKIEQVVRLIRSKGVGVYFVT HHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEE QNPVDIPDTVLGQLGNRVQHALRAFTPRDQKAVKVAATTMRANPKLNLETVIGELGVGEA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHH LVSLLDAKGTPGVTERAWVLAPGSRIGPITEDERKQLIATSLVAGTYEKAIDRESAYEKL HHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGGVASAANGGGNGGTSVQKPTGGAPAEEGGWLGTAGEIFGSLTKGTGKTGRGDSILESM HCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH AKSAARTVGSQVGRELIRGVLGSLLGGGKKK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]