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The map label for this gene is omp32 [H]

Identifier: 73542125

GI number: 73542125

Start: 2674285

End: 2675364

Strand: Direct

Name: omp32 [H]

Synonym: Reut_A2439

Alternate gene names: 73542125

Gene position: 2674285-2675364 (Clockwise)

Preceding gene: 73542124

Following gene: 73542126

Centisome position: 70.26

GC content: 61.94

Gene sequence:

>1080_bases
ATGCAGAAGCAGTACAAGCCGGCACTGAAGCTGGCAGCCGTAGCAGCTACCCTTCTTTCCGGCGCGGCCATGGCACAGTC
GAGCGTGACGCTCTACGGCCAGGCCGATATGTTTGTTGGCGGCTTCAAGGACGTGGGCGGTGCGGACCGCGCATGGGTGG
CCAACTCGGGCGGCATGCAGACGTCGTACTGGGGCATCAAGGGCACGGAAGACCTGGGCAGCGGCAACAAGGCCATCTTC
GACCTGAACGGCTTCTTCCGCACCGACAGCGGCAGCATGGGCCGCTTCAACGGCGACTCGATGTTCAGCCGCAACGCCTA
TGTCGGCCTGCAGAACGACAAGTACGGTACCGTCAAGCTGGGCCGCAACACCACGCCCTACTTCATCTCGACCATCCTGT
TCAACCCGCTGGTCGACTCGTACGTGTTCTCGCCGACCATCTTCCACACCTACCTGGTGTCGGCAGTGCCGGGCAAGCTC
AATGACCCGGGCATCATCGGCGATTCGGGCTGGAACAACTCGGTGCTGTACAGCACGCCGAACTTCGGCGGCCTCACCGC
GAACGTGATCTATTCCTTCGGGGAGCAGCCGGGCAAGACCAGCGAGAACAAGTGGGGCGGCAACCTGATGTATTTCAACG
GCCCGTTCGCAGCAACGCTGGCCTACCAGCAGGTCAAGTTCAACATCCAGCCTGTCGGCGACCTCGGCGTGCCGACCGGC
TTCGATCGCCAGGACGCCGTCCAGGGCGGCATCACGTACGACTTCCAGGTCGTCAAGCTGTTCGCGCAAGCGCAGTACAT
CAAGACCCGCATCAACGGCGCCGGCAACGGCGGCGACCTGAAGCACACCAACGGCCAGATTGGCGCGTCGGTTCCGGTTG
GTGCAGGCAACGTGCTGGTCTCGTACTCGTATGACAAGACCAAGAACGACGTGACCGACTTCAAGCGCAACACGGCCGCC
ATCGCCTACGACTACAACCTGTCCAAGCGTACCGACGTCTACGCCGCGTACTACTACGACAAGCGCAACGACGCCGAGCA
CGGTGATACGTTTGGCGTCGGTATGCGTCACAAGTTCTGA

Upstream 100 bases:

>100_bases
GACCAGGTGGCACGAACAGAAGCGCAAAGAACAGAACAAGAACCCGACAGGGACCCAGTACACAACGTTCCAAGCAGGAT
CAAACCACGGAGGTCTAAAA

Downstream 100 bases:

>100_bases
CGCACTGTAACTGTAGATCGCGGGAATACCGCATGCAGCCCTGAGCCCGCCCCTTGGCGGGCTTTTTTGTTGCCGCGCCG
GGATCACATCTGGCACGGTC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MQKQYKPALKLAAVAATLLSGAAMAQSSVTLYGQADMFVGGFKDVGGADRAWVANSGGMQTSYWGIKGTEDLGSGNKAIF
DLNGFFRTDSGSMGRFNGDSMFSRNAYVGLQNDKYGTVKLGRNTTPYFISTILFNPLVDSYVFSPTIFHTYLVSAVPGKL
NDPGIIGDSGWNNSVLYSTPNFGGLTANVIYSFGEQPGKTSENKWGGNLMYFNGPFAATLAYQQVKFNIQPVGDLGVPTG
FDRQDAVQGGITYDFQVVKLFAQAQYIKTRINGAGNGGDLKHTNGQIGASVPVGAGNVLVSYSYDKTKNDVTDFKRNTAA
IAYDYNLSKRTDVYAAYYYDKRNDAEHGDTFGVGMRHKF

Sequences:

>Translated_359_residues
MQKQYKPALKLAAVAATLLSGAAMAQSSVTLYGQADMFVGGFKDVGGADRAWVANSGGMQTSYWGIKGTEDLGSGNKAIF
DLNGFFRTDSGSMGRFNGDSMFSRNAYVGLQNDKYGTVKLGRNTTPYFISTILFNPLVDSYVFSPTIFHTYLVSAVPGKL
NDPGIIGDSGWNNSVLYSTPNFGGLTANVIYSFGEQPGKTSENKWGGNLMYFNGPFAATLAYQQVKFNIQPVGDLGVPTG
FDRQDAVQGGITYDFQVVKLFAQAQYIKTRINGAGNGGDLKHTNGQIGASVPVGAGNVLVSYSYDKTKNDVTDFKRNTAA
IAYDYNLSKRTDVYAAYYYDKRNDAEHGDTFGVGMRHKF
>Mature_359_residues
MQKQYKPALKLAAVAATLLSGAAMAQSSVTLYGQADMFVGGFKDVGGADRAWVANSGGMQTSYWGIKGTEDLGSGNKAIF
DLNGFFRTDSGSMGRFNGDSMFSRNAYVGLQNDKYGTVKLGRNTTPYFISTILFNPLVDSYVFSPTIFHTYLVSAVPGKL
NDPGIIGDSGWNNSVLYSTPNFGGLTANVIYSFGEQPGKTSENKWGGNLMYFNGPFAATLAYQQVKFNIQPVGDLGVPTG
FDRQDAVQGGITYDFQVVKLFAQAQYIKTRINGAGNGGDLKHTNGQIGASVPVGAGNVLVSYSYDKTKNDVTDFKRNTAA
IAYDYNLSKRTDVYAAYYYDKRNDAEHGDTFGVGMRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38854; Mature: 38854

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQYKPALKLAAVAATLLSGAAMAQSSVTLYGQADMFVGGFKDVGGADRAWVANSGGMQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCCE
TSYWGIKGTEDLGSGNKAIFDLNGFFRTDSGSMGRFNGDSMFSRNAYVGLQNDKYGTVKL
EEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCEECCCEEEEECCCCEEEEEE
GRNTTPYFISTILFNPLVDSYVFSPTIFHTYLVSAVPGKLNDPGIIGDSGWNNSVLYSTP
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEECC
NFGGLTANVIYSFGEQPGKTSENKWGGNLMYFNGPFAATLAYQQVKFNIQPVGDLGVPTG
CCCCEEHHHHEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCC
FDRQDAVQGGITYDFQVVKLFAQAQYIKTRINGAGNGGDLKHTNGQIGASVPVGAGNVLV
CCHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEE
SYSYDKTKNDVTDFKRNTAAIAYDYNLSKRTDVYAAYYYDKRNDAEHGDTFGVGMRHKF
EEECCCCCCHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MQKQYKPALKLAAVAATLLSGAAMAQSSVTLYGQADMFVGGFKDVGGADRAWVANSGGMQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCCE
TSYWGIKGTEDLGSGNKAIFDLNGFFRTDSGSMGRFNGDSMFSRNAYVGLQNDKYGTVKL
EEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCEECCCEEEEECCCCEEEEEE
GRNTTPYFISTILFNPLVDSYVFSPTIFHTYLVSAVPGKLNDPGIIGDSGWNNSVLYSTP
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEECC
NFGGLTANVIYSFGEQPGKTSENKWGGNLMYFNGPFAATLAYQQVKFNIQPVGDLGVPTG
CCCCEEHHHHEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCC
FDRQDAVQGGITYDFQVVKLFAQAQYIKTRINGAGNGGDLKHTNGQIGASVPVGAGNVLV
CCHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEE
SYSYDKTKNDVTDFKRNTAAIAYDYNLSKRTDVYAAYYYDKRNDAEHGDTFGVGMRHKF
EEECCCCCCHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]