| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73542074
Identifier: 73542074
GI number: 73542074
Start: 2627873
End: 2629423
Strand: Direct
Name: 73542074
Synonym: Reut_A2388
Alternate gene names: NA
Gene position: 2627873-2629423 (Clockwise)
Preceding gene: 73542073
Following gene: 73542075
Centisome position: 69.04
GC content: 63.31
Gene sequence:
>1551_bases ATGAAAAACAGGTCGCTGCCGCCGTCGCCAAGCTCGAGGACGAGTATTGATCCGTCCGTCGAGCGCGCCGTCCTGAAGGC GAAGTGCGAGCGCGATCACCTGTTTTTCAGCCGGTACTTCTTCAAGCATCGGCAAGGCATCAAGTTCCGCGTCAACTGGC ACCACGTGCTGATCGCGGACACGGTGCAGCGTGTCATCGATGGCGAGCTGAAGAACGTCGTCATCAACGTCCCGCCGGGC TCGTCGAAGACTGAGCTTGTCGCGATCAACCTGATCGCCCGGGGCCTGGCGGTGAACCCGCGTGCACGGTTCCTGCACAT CTCGTATTCGGATGACCTGGCGCTGCTGAATAGCGAGACGGCGCGCGAGATCGTCCAGTCCGACGAGTTCCAGGACCTGT GGCCGCTGACCATCGCGCCGGACGCGAAGTCGAAGAAACGCTGGAACGTCATCGCCGACGGCAAGAAGGCCGGCGGCGTG TATGCGGTGTCGCTGGGTGGCCAGATCACTGGCTTCCGCGCCGGCCACATGACCGAGGGATGGCAGGGCGCCATCATCAT CGACGACCCGCTGAAGGTCGAGGACGCGTACAGCAAGCCGAACCGCGACAAGGCGAACCGCAAGCTGCTGTCCACGGTGA AGAGCCGAAAGGCCAACCCGGACACGCCGATCATCGTGATCATGCAGCGACTGGCCGAGGAAGACCCGACGGGCTTCATC AAGGGCGGCAAGGTGCCGGGCGACTGGGAATTCATCGAGATCCCGGCGCTGATCACCGACGCGTACGTCGAGGCACTGCC AGAGCGCATCCGCGCGATGGTGGAACTGGAAGAGAAGGACGAAGACGGCCGCTTCAGCTACTGGCCCTACAAGGAACCGC TCGACGACCTGCTGGCCAGCGAGAAGGCTGACCGGTACGTGTTCAGCGGGCAGTACATGCAGCGCCCTTCCCCGCTGGGC GGCGGCATCATCAAGAGCGCCAACTTCGGTCGCTACTCGGTGGTGCCCGAGCTGCACAAGCGCGTCATCTACGCCGACAC GGCGCAGAAGACGGCCGAGCGGAACGATTACAGCGTTCTGCAGTGCTGGGGGCACGGCAAGAACGGACGCATCTACCTGC TGGACCAGATCCGCGGGAAGTGGCCAGCACCAGAGCTGCGACAGAAAGCGATCGACTTCTGGAACAAGCACCTGCCGCAC GACTTCCACTTCGGCGCGCCTCTGGTGCGCATGATGATCGAGGACAAGGCCAGCGGCACCGGCCTTATTCAGGACATCGA GGCGTCGGGCAGCATCCCCGTCGAGGGCATCGAGCGCAACCGGGACAAGCTGACGCGCGTCATGGACGTGGTCAGCTATA TCGACAGCGGCCTGGTGATGATCCCCGAGGCGGCGGAATGGGTCAGCGACTTCACGCAGGAATGCGACGCCTTCACGCCG GACGATACGCACGCGCACGATGACCAGATCGATCCGATGGTGGACGCGATCAACGACATGCTGGCCGGCGGCCGCTCGAT GGATATCTGGACGAAACTCGGACAGCAATGA
Upstream 100 bases:
>100_bases TTCTGGCTGAAGACGCAGGCAGGATGGAAGGAAACGCCGAAGCGCATCGAGCTGACAGGGGAAGACGGCGGGCCGGTCGA GCAACGAACCACCGTCGTCG
Downstream 100 bases:
>100_bases ACCGTAACCAACGCAAGGCGCACAAGCTCGCGCACCGGGCCAATGTGGCCGCGTCCGCGAGCGCCAAGCGCTGGATCAGC GGTGACAGCTTCCAGAACTT
Product: Phage uncharacterized protein, C-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKNRSLPPSPSSRTSIDPSVERAVLKAKCERDHLFFSRYFFKHRQGIKFRVNWHHVLIADTVQRVIDGELKNVVINVPPG SSKTELVAINLIARGLAVNPRARFLHISYSDDLALLNSETAREIVQSDEFQDLWPLTIAPDAKSKKRWNVIADGKKAGGV YAVSLGGQITGFRAGHMTEGWQGAIIIDDPLKVEDAYSKPNRDKANRKLLSTVKSRKANPDTPIIVIMQRLAEEDPTGFI KGGKVPGDWEFIEIPALITDAYVEALPERIRAMVELEEKDEDGRFSYWPYKEPLDDLLASEKADRYVFSGQYMQRPSPLG GGIIKSANFGRYSVVPELHKRVIYADTAQKTAERNDYSVLQCWGHGKNGRIYLLDQIRGKWPAPELRQKAIDFWNKHLPH DFHFGAPLVRMMIEDKASGTGLIQDIEASGSIPVEGIERNRDKLTRVMDVVSYIDSGLVMIPEAAEWVSDFTQECDAFTP DDTHAHDDQIDPMVDAINDMLAGGRSMDIWTKLGQQ
Sequences:
>Translated_516_residues MKNRSLPPSPSSRTSIDPSVERAVLKAKCERDHLFFSRYFFKHRQGIKFRVNWHHVLIADTVQRVIDGELKNVVINVPPG SSKTELVAINLIARGLAVNPRARFLHISYSDDLALLNSETAREIVQSDEFQDLWPLTIAPDAKSKKRWNVIADGKKAGGV YAVSLGGQITGFRAGHMTEGWQGAIIIDDPLKVEDAYSKPNRDKANRKLLSTVKSRKANPDTPIIVIMQRLAEEDPTGFI KGGKVPGDWEFIEIPALITDAYVEALPERIRAMVELEEKDEDGRFSYWPYKEPLDDLLASEKADRYVFSGQYMQRPSPLG GGIIKSANFGRYSVVPELHKRVIYADTAQKTAERNDYSVLQCWGHGKNGRIYLLDQIRGKWPAPELRQKAIDFWNKHLPH DFHFGAPLVRMMIEDKASGTGLIQDIEASGSIPVEGIERNRDKLTRVMDVVSYIDSGLVMIPEAAEWVSDFTQECDAFTP DDTHAHDDQIDPMVDAINDMLAGGRSMDIWTKLGQQ >Mature_516_residues MKNRSLPPSPSSRTSIDPSVERAVLKAKCERDHLFFSRYFFKHRQGIKFRVNWHHVLIADTVQRVIDGELKNVVINVPPG SSKTELVAINLIARGLAVNPRARFLHISYSDDLALLNSETAREIVQSDEFQDLWPLTIAPDAKSKKRWNVIADGKKAGGV YAVSLGGQITGFRAGHMTEGWQGAIIIDDPLKVEDAYSKPNRDKANRKLLSTVKSRKANPDTPIIVIMQRLAEEDPTGFI KGGKVPGDWEFIEIPALITDAYVEALPERIRAMVELEEKDEDGRFSYWPYKEPLDDLLASEKADRYVFSGQYMQRPSPLG GGIIKSANFGRYSVVPELHKRVIYADTAQKTAERNDYSVLQCWGHGKNGRIYLLDQIRGKWPAPELRQKAIDFWNKHLPH DFHFGAPLVRMMIEDKASGTGLIQDIEASGSIPVEGIERNRDKLTRVMDVVSYIDSGLVMIPEAAEWVSDFTQECDAFTP DDTHAHDDQIDPMVDAINDMLAGGRSMDIWTKLGQQ
Specific function: Unknown
COG id: COG5410
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004921 [H]
Pfam domain/function: PF03237 Terminase_6 [H]
EC number: NA
Molecular weight: Translated: 58078; Mature: 58078
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRSLPPSPSSRTSIDPSVERAVLKAKCERDHLFFSRYFFKHRQGIKFRVNWHHVLIAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHH TVQRVIDGELKNVVINVPPGSSKTELVAINLIARGLAVNPRARFLHISYSDDLALLNSET HHHHHHCCCCCEEEEECCCCCCCCEEEEEEEHHCCCEECCCEEEEEEECCCCEEECCCHH AREIVQSDEFQDLWPLTIAPDAKSKKRWNVIADGKKAGGVYAVSLGGQITGFRAGHMTEG HHHHHHCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCEEEEEECCEEEEEECCCCCCC WQGAIIIDDPLKVEDAYSKPNRDKANRKLLSTVKSRKANPDTPIIVIMQRLAEEDPTGFI CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCE KGGKVPGDWEFIEIPALITDAYVEALPERIRAMVELEEKDEDGRFSYWPYKEPLDDLLAS ECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHC EKADRYVFSGQYMQRPSPLGGGIIKSANFGRYSVVPELHKRVIYADTAQKTAERNDYSVL CCCCCEEECCHHHCCCCCCCCCEEECCCCCCEECCHHHHHHEEEECHHHHHHCCCCCEEE QCWGHGKNGRIYLLDQIRGKWPAPELRQKAIDFWNKHLPHDFHFGAPLVRMMIEDKASGT EEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC GLIQDIEASGSIPVEGIERNRDKLTRVMDVVSYIDSGLVMIPEAAEWVSDFTQECDAFTP CCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCC DDTHAHDDQIDPMVDAINDMLAGGRSMDIWTKLGQQ CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure MKNRSLPPSPSSRTSIDPSVERAVLKAKCERDHLFFSRYFFKHRQGIKFRVNWHHVLIAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHH TVQRVIDGELKNVVINVPPGSSKTELVAINLIARGLAVNPRARFLHISYSDDLALLNSET HHHHHHCCCCCEEEEECCCCCCCCEEEEEEEHHCCCEECCCEEEEEEECCCCEEECCCHH AREIVQSDEFQDLWPLTIAPDAKSKKRWNVIADGKKAGGVYAVSLGGQITGFRAGHMTEG HHHHHHCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCEEEEEECCEEEEEECCCCCCC WQGAIIIDDPLKVEDAYSKPNRDKANRKLLSTVKSRKANPDTPIIVIMQRLAEEDPTGFI CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCE KGGKVPGDWEFIEIPALITDAYVEALPERIRAMVELEEKDEDGRFSYWPYKEPLDDLLAS ECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHC EKADRYVFSGQYMQRPSPLGGGIIKSANFGRYSVVPELHKRVIYADTAQKTAERNDYSVL CCCCCEEECCHHHCCCCCCCCCEEECCCCCCEECCHHHHHHEEEECHHHHHHCCCCCEEE QCWGHGKNGRIYLLDQIRGKWPAPELRQKAIDFWNKHLPHDFHFGAPLVRMMIEDKASGT EEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC GLIQDIEASGSIPVEGIERNRDKLTRVMDVVSYIDSGLVMIPEAAEWVSDFTQECDAFTP CCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCC DDTHAHDDQIDPMVDAINDMLAGGRSMDIWTKLGQQ CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]