| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73542027
Identifier: 73542027
GI number: 73542027
Start: 2581608
End: 2582111
Strand: Reverse
Name: 73542027
Synonym: Reut_A2341
Alternate gene names: NA
Gene position: 2582111-2581608 (Counterclockwise)
Preceding gene: 73542028
Following gene: 73542024
Centisome position: 67.83
GC content: 61.9
Gene sequence:
>504_bases ATGCTGAAGCGCTGCTTTCCTCCTGTAGTCGATGCCGAAACACGGGTGCTGATTCTTGGAAGCCTGCCGGGGGAGGCGTC GCTGGCGCAAGGCCAGTATTACGCGCACAAGCAGAATCAGTTTTGGCGCCTCGTTGGCGATACGATCGGCGAAGCTTTGG TGCAGATGGACTACCCGTTGCGCCTGCAGACACTGCTGGCTCACCACATCGGCCTGTGGGATGTCGTGGCCGAAGCCAAG CGCGAAGGCAGTCTCGACAGCAACATCCGCGATCACGCCGGCAATGACCTGATCGGCCTGATCGATTCGCTGCCGAGCCT TGCCGTGATTGCGTTCAACGGCGGTACCGCCGAGCGTATTGGATTGAAAGCACTGCGCGAGCATGGCGATCGCCATCACA TCGTCAGGCTGCCCTCCAGCAGCCCTGCGCACACCAGGTCCTACGGGGAAAAGCTGAGCGCCTGGCAGGCGTTGCAAACG TGGCTGCCTGCCGGGTCGCGCTGA
Upstream 100 bases:
>100_bases GCTGGCCTGAACATAGGCGTGAAGAGAAGGGCCGGGCGACCGGCCCTTTTTTGCTTCTGGCCTGCGTGAAGGAGAAGGAT ACAACTGAAGTCGATTGACG
Downstream 100 bases:
>100_bases CATTCACCCGGCTGCCTATCCCAACTCCGGCTGCGTAGCCGCATAGCTCGGCCGCGCACGCATGATCGCATGAGCGTGCC GGATATTCGGCCGCGTTTCC
Product: uracil-DNA glycosylase superfamily protein
Products: NA
Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLKRCFPPVVDAETRVLILGSLPGEASLAQGQYYAHKQNQFWRLVGDTIGEALVQMDYPLRLQTLLAHHIGLWDVVAEAK REGSLDSNIRDHAGNDLIGLIDSLPSLAVIAFNGGTAERIGLKALREHGDRHHIVRLPSSSPAHTRSYGEKLSAWQALQT WLPAGSR
Sequences:
>Translated_167_residues MLKRCFPPVVDAETRVLILGSLPGEASLAQGQYYAHKQNQFWRLVGDTIGEALVQMDYPLRLQTLLAHHIGLWDVVAEAK REGSLDSNIRDHAGNDLIGLIDSLPSLAVIAFNGGTAERIGLKALREHGDRHHIVRLPSSSPAHTRSYGEKLSAWQALQT WLPAGSR >Mature_167_residues MLKRCFPPVVDAETRVLILGSLPGEASLAQGQYYAHKQNQFWRLVGDTIGEALVQMDYPLRLQTLLAHHIGLWDVVAEAK REGSLDSNIRDHAGNDLIGLIDSLPSLAVIAFNGGTAERIGLKALREHGDRHHIVRLPSSSPAHTRSYGEKLSAWQALQT WLPAGSR
Specific function: Unknown
COG id: COG3663
COG function: function code L; G:T/U mismatch-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18391; Mature: 18391
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRCFPPVVDAETRVLILGSLPGEASLAQGQYYAHKQNQFWRLVGDTIGEALVQMDYPL CCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCH RLQTLLAHHIGLWDVVAEAKREGSLDSNIRDHAGNDLIGLIDSLPSLAVIAFNGGTAERI HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCCCEEEEEECCCCHHHH GLKALREHGDRHHIVRLPSSSPAHTRSYGEKLSAWQALQTWLPAGSR HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLKRCFPPVVDAETRVLILGSLPGEASLAQGQYYAHKQNQFWRLVGDTIGEALVQMDYPL CCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCH RLQTLLAHHIGLWDVVAEAKREGSLDSNIRDHAGNDLIGLIDSLPSLAVIAFNGGTAERI HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCCCEEEEEECCCCHHHH GLKALREHGDRHHIVRLPSSSPAHTRSYGEKLSAWQALQTWLPAGSR HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA