| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is sspA [H]
Identifier: 73542026
GI number: 73542026
Start: 2580774
End: 2581592
Strand: Direct
Name: sspA [H]
Synonym: Reut_A2340
Alternate gene names: 73542026
Gene position: 2580774-2581592 (Clockwise)
Preceding gene: 73542025
Following gene: 73542030
Centisome position: 67.8
GC content: 63.13
Gene sequence:
>819_bases ATGGGAAGGCAGCGAACTACCGGCCGCGTGCGCACGCTGATCGAGATCACGCTGACCGACAAGGATGGCGGCACGCATCT GCATATGCGCCATTCCGGCTTCCCCGACGCAGCCACGCGCGATTCGCACGACAACGGCTGGCAATCGGTCTTCAACAACC TCAGCGACTATCTGGATGCCGAAGGCAGCGCCGGCACGCTGACCGTCTACGGCGATGCGCGCAGCACCTACGTGCGCACG GTGCGCCTGGCGCTCGAAGAGAAAGGCGTGCGCTACACGCTCAAGCCGGTCCCGCCGCATAGCGACGAACTGCTGTCCCA CAACCCGTTCGGCCGCATTCCCGCATTCAGCGACGGCCCGATCGATTTCTACGAAACGCGCGCCATCCTGAGCTACATCA ACGAAGTCTTCGGTGGCCCGAACCTGATTCCGCAGACCGGCCCAACTGCCCGCGCACGCTGCGAGCAGTGGATCAGCCTG ATCAACTGCCACGCTTACGATGCGATGGTGCGCCGCTACGTCTTGCACTATGTGTTCCCTAAAGGCAAGGACGGCCAGCC CGATCGCGCGGTCATCGATGCGGCACTGCCCGATATCGAAAAGCAGCTCGATGTCCTGGAGCAGGCATACGGCGGACGCG ATTTTCTGGTCGGCAATGCCTTGTCGATGGCCGACCTGTTCTTCGCGCCGATCGTCGAATACCTGGGGCGATTCCCCGAA AGCGCGGCGATGCTGGAAACGCGGCCGAATATCCGGCACGCTCATGCGATCATGCGTGCGCGGCCGAGCTATGCGGCTAC GCAGCCGGAGTTGGGATAG
Upstream 100 bases:
>100_bases GCTACCGGCTTGTGATGGGCGCGAAGGACGGCGAGCAACACATCGTCGGCGGCGAGTATCAGGCCATCGATCGTGCCAAC TTCCTGGCGTACACGTGGCA
Downstream 100 bases:
>100_bases GCAGCCGGGTGAATGTCAGCGCGACCCGGCAGGCAGCCACGTTTGCAACGCCTGCCAGGCGCTCAGCTTTTCCCCGTAGG ACCTGGTGTGCGCAGGGCTG
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGRQRTTGRVRTLIEITLTDKDGGTHLHMRHSGFPDAATRDSHDNGWQSVFNNLSDYLDAEGSAGTLTVYGDARSTYVRT VRLALEEKGVRYTLKPVPPHSDELLSHNPFGRIPAFSDGPIDFYETRAILSYINEVFGGPNLIPQTGPTARARCEQWISL INCHAYDAMVRRYVLHYVFPKGKDGQPDRAVIDAALPDIEKQLDVLEQAYGGRDFLVGNALSMADLFFAPIVEYLGRFPE SAAMLETRPNIRHAHAIMRARPSYAATQPELG
Sequences:
>Translated_272_residues MGRQRTTGRVRTLIEITLTDKDGGTHLHMRHSGFPDAATRDSHDNGWQSVFNNLSDYLDAEGSAGTLTVYGDARSTYVRT VRLALEEKGVRYTLKPVPPHSDELLSHNPFGRIPAFSDGPIDFYETRAILSYINEVFGGPNLIPQTGPTARARCEQWISL INCHAYDAMVRRYVLHYVFPKGKDGQPDRAVIDAALPDIEKQLDVLEQAYGGRDFLVGNALSMADLFFAPIVEYLGRFPE SAAMLETRPNIRHAHAIMRARPSYAATQPELG >Mature_271_residues GRQRTTGRVRTLIEITLTDKDGGTHLHMRHSGFPDAATRDSHDNGWQSVFNNLSDYLDAEGSAGTLTVYGDARSTYVRTV RLALEEKGVRYTLKPVPPHSDELLSHNPFGRIPAFSDGPIDFYETRAILSYINEVFGGPNLIPQTGPTARARCEQWISLI NCHAYDAMVRRYVLHYVFPKGKDGQPDRAVIDAALPDIEKQLDVLEQAYGGRDFLVGNALSMADLFFAPIVEYLGRFPES AAMLETRPNIRHAHAIMRARPSYAATQPELG
Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 30317; Mature: 30185
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQRTTGRVRTLIEITLTDKDGGTHLHMRHSGFPDAATRDSHDNGWQSVFNNLSDYLDA CCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC EGSAGTLTVYGDARSTYVRTVRLALEEKGVRYTLKPVPPHSDELLSHNPFGRIPAFSDGP CCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCC IDFYETRAILSYINEVFGGPNLIPQTGPTARARCEQWISLINCHAYDAMVRRYVLHYVFP CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGKDGQPDRAVIDAALPDIEKQLDVLEQAYGGRDFLVGNALSMADLFFAPIVEYLGRFPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCC SAAMLETRPNIRHAHAIMRARPSYAATQPELG CHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GRQRTTGRVRTLIEITLTDKDGGTHLHMRHSGFPDAATRDSHDNGWQSVFNNLSDYLDA CCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC EGSAGTLTVYGDARSTYVRTVRLALEEKGVRYTLKPVPPHSDELLSHNPFGRIPAFSDGP CCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCC IDFYETRAILSYINEVFGGPNLIPQTGPTARARCEQWISLINCHAYDAMVRRYVLHYVFP CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGKDGQPDRAVIDAALPDIEKQLDVLEQAYGGRDFLVGNALSMADLFFAPIVEYLGRFPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCC SAAMLETRPNIRHAHAIMRARPSYAATQPELG CHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]