| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is trpF [H]
Identifier: 73541993
GI number: 73541993
Start: 2544079
End: 2544795
Strand: Reverse
Name: trpF [H]
Synonym: Reut_A2307
Alternate gene names: 73541993
Gene position: 2544795-2544079 (Counterclockwise)
Preceding gene: 73541994
Following gene: 73541992
Centisome position: 66.85
GC content: 67.5
Gene sequence:
>717_bases ATGACGCAGCCTGAGCGTGCCGACGCCGCGGCACCGGCCCGCACCCGCATCAAGATCTGCGGCCTCACGCGCGAGGACGA CGTCCGCGCCGCGGTTGACGCGGGTGCTGACGCAATCGGGCTGGTGTTCTATCCGCCCAGTCCGCGCTATGTGGATCTGG CCCGCGCAGCGGAACTTGCCGAGGTCGCGGGGCCGTTCGTGTCCGTGGTCGGCCTGTTCGTCAATGCCGAGATGGAAGAC GTGGCTCACGTCGCCGAGCGTGTGCCCCTTACGATGCTCCAGTTCCACGGCGACGAGACCCCGCAGTCCTGCACCCAGAC CGCCCAGCGCTGCCGCCTGCCTTTTCTGCGCGCGGCGCGTGTGCGGCCAGGGCTCGATTTGGTAGAATTCGCCGGTCAAT ACCGCGATGCCGCTGGCTTGCTGCTCGACGCTTTCGTCGAGGGCTATGGCGGCGGCGGCCACGTCTTCGACTGGACCCTG ATCCCTCCGGCATGGCTTGCTTCCAACCATCCGTCTCCCGGCAACCCGAACGCAAACGGCGCTCCTCGCATCGTTTTGAG TGGTGGGTTGAACGCGCAAAACGTCGCTGGCGCGATTGAACGCGTGCGGCCCTACGCTGTGGATGTCAGCAGCGGAGTCG AGGCCGCCAAGGGCGTGAAGGACCACGCCCGCATCGCCGCGTTCGTGCGCGCAGTCCGCAGTGCCGAGGCAGGATGA
Upstream 100 bases:
>100_bases ATGCCGGACGGTCTCTACCTCGCGGACGTGAAGTATCCTGAGGCTTACAAGATTCCGGCGGCGGACCCATCCGCCAGCCT GTTCCACGGAGTATTCCGCC
Downstream 100 bases:
>100_bases AGCGGTCGCAAGATCGGCCCCTTCACCATGGCCCCGGCGAATTGCAGTAGCGCCGCTCGCATCGCAGTCAAAATTTGCGC CCTTGCCCGTGAGGCAAGGC
Product: N-(5'-phosphoribosyl)anthranilate isomerase
Products: NA
Alternate protein names: PRAI [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTQPERADAAAPARTRIKICGLTREDDVRAAVDAGADAIGLVFYPPSPRYVDLARAAELAEVAGPFVSVVGLFVNAEMED VAHVAERVPLTMLQFHGDETPQSCTQTAQRCRLPFLRAARVRPGLDLVEFAGQYRDAAGLLLDAFVEGYGGGGHVFDWTL IPPAWLASNHPSPGNPNANGAPRIVLSGGLNAQNVAGAIERVRPYAVDVSSGVEAAKGVKDHARIAAFVRAVRSAEAG
Sequences:
>Translated_238_residues MTQPERADAAAPARTRIKICGLTREDDVRAAVDAGADAIGLVFYPPSPRYVDLARAAELAEVAGPFVSVVGLFVNAEMED VAHVAERVPLTMLQFHGDETPQSCTQTAQRCRLPFLRAARVRPGLDLVEFAGQYRDAAGLLLDAFVEGYGGGGHVFDWTL IPPAWLASNHPSPGNPNANGAPRIVLSGGLNAQNVAGAIERVRPYAVDVSSGVEAAKGVKDHARIAAFVRAVRSAEAG >Mature_237_residues TQPERADAAAPARTRIKICGLTREDDVRAAVDAGADAIGLVFYPPSPRYVDLARAAELAEVAGPFVSVVGLFVNAEMEDV AHVAERVPLTMLQFHGDETPQSCTQTAQRCRLPFLRAARVRPGLDLVEFAGQYRDAAGLLLDAFVEGYGGGGHVFDWTLI PPAWLASNHPSPGNPNANGAPRIVLSGGLNAQNVAGAIERVRPYAVDVSSGVEAAKGVKDHARIAAFVRAVRSAEAG
Specific function: Bifunctional Enzyme That Catalyzes Two Sequential Steps Of Tryptophan Biosynthetic Pathway. The First Reaction Is Catalyzed By The Isomerase, Coded By The Trpf Domain; The Second Reaction Is Catalyzed By The Synthase, Coded By The Trpc Domain. [C]
COG id: COG0135
COG function: function code E; Phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpF family [H]
Homologues:
Organism=Escherichia coli, GI87081863, Length=219, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320210, Length=224, Percent_Identity=27.2321428571429, Blast_Score=79, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001240 - InterPro: IPR011060 [H]
Pfam domain/function: PF00697 PRAI [H]
EC number: =5.3.1.24 [H]
Molecular weight: Translated: 25134; Mature: 25002
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPERADAAAPARTRIKICGLTREDDVRAAVDAGADAIGLVFYPPSPRYVDLARAAELA CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHH EVAGPFVSVVGLFVNAEMEDVAHVAERVPLTMLQFHGDETPQSCTQTAQRCRLPFLRAAR HHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHCCHHHHHHH VRPGLDLVEFAGQYRDAAGLLLDAFVEGYGGGGHVFDWTLIPPAWLASNHPSPGNPNANG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCC APRIVLSGGLNAQNVAGAIERVRPYAVDVSSGVEAAKGVKDHARIAAFVRAVRSAEAG CCEEEEECCCCHHHHHHHHHHHCCEEEEHHHCHHHHHCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQPERADAAAPARTRIKICGLTREDDVRAAVDAGADAIGLVFYPPSPRYVDLARAAELA CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHH EVAGPFVSVVGLFVNAEMEDVAHVAERVPLTMLQFHGDETPQSCTQTAQRCRLPFLRAAR HHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHCCHHHHHHH VRPGLDLVEFAGQYRDAAGLLLDAFVEGYGGGGHVFDWTLIPPAWLASNHPSPGNPNANG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCC APRIVLSGGLNAQNVAGAIERVRPYAVDVSSGVEAAKGVKDHARIAAFVRAVRSAEAG CCEEEEECCCCHHHHHHHHHHHCCEEEEHHHCHHHHHCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA